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Revision 5da0ff47

Added by Benoit Parmentier over 11 years ago

kriging day, predictions for paper, testing covariates combination 3

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climate/research/oregon/interpolation/master_script_temp.R
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#STAGE 5: Output analyses: assessment of results for specific dates...
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#
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#AUTHOR: Benoit Parmentier                                                                       
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#DATE: 07/12/2013                                                                                 
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#DATE: 07/11/2013                                                                                 
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#PROJECT: NCEAS INPLANT: Environment and Organisms --TASK#363, TASK$568--   
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......
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stages_to_run<-c(0,2,3,4,5) #May decide on antoher strategy later on...
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var<-"TMAX" # variable being interpolated
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out_prefix<-"_365d_gwr_day_lst_comb3_part1_07122013"                #User defined output prefix
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out_suffix<-"_OR_07122013"
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out_prefix<-"_365d_kriging_day_lst_comb3_07112013"                #User defined output prefix
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out_suffix<-"_OR_07112013"
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out_suffix_modis <-"_05302013" #use tiles produce previously
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#interpolation_method<-c("gam_fusion","gam_CAI","gam_daily") #other otpions to be added later
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#interpolation_method<-c("gam_CAI") #other otpions to be added later
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#interpolation_method<-c("gam_fusion") #other otpions to be added later
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#interpolation_method<-c("gam_daily") #other otpions to be added later
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#interpolation_method<-c("kriging_daily") #other otpions to be added later
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interpolation_method<-c("gwr_daily") #other otpions to be added later
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interpolation_method<-c("kriging_daily") #other otpions to be added later
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#interpolation_method<-c("gwr_daily") #other otpions to be added later
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#out_path <- paste("/home/parmentier/Data/IPLANT_project/Venezuela_interpolation/Venezuela_01142013/output_data",
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#                  out_prefix,"/",sep="")
......
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(N_w,E_w) + s(LST) + ti(LC6,LST)", 
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(N_w,E_w) + s(LST) + s(DISTOC)")
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#testing combination 3, part 1 for GWR day
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#testing new combinations and tensor for paper
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list_models<-c("y_var ~ lat*lon + elev_s",
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               "y_var ~ lat*lon + elev_s + N_w",
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               "y_var ~ lat*lon + elev_s + E_w")
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#list_models<-c("y_var ~ lat*lon + elev_s",
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#               "y_var ~ lat*lon + elev_s + N_w",
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#               "y_var ~ lat*lon + elev_s + E_w",
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#               "y_var ~ lat*lon + elev_s + LST",
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#               "y_var ~ lat*lon + elev_s + DISTOC",
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#               "y_var ~ lat*lon + elev_s + LC1",
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#               "y_var ~ lat*lon + elev_s + CANHGHT",
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#               "y_var ~ lat*lon + elev_s + LST + I(LST*LC1)",
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#               "y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)")
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               "y_var ~ lat*lon + elev_s + E_w",
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               "y_var ~ lat*lon + elev_s + LST",
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               "y_var ~ lat*lon + elev_s + DISTOC",
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               "y_var ~ lat*lon + elev_s + LC1",
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               "y_var ~ lat*lon + elev_s + CANHGHT",
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               "y_var ~ lat*lon + elev_s + LST + I(LST*LC1)",
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               "y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)")
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#list_models<-c("y_var~ lat + lon + elev_",
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#               "y_var~ I(lat*lon) + elev_s",

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