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Revision 67ab82b4

Added by Benoit Parmentier over 11 years ago

master script gam CAI predictions run and modifications

View differences:

climate/research/oregon/interpolation/master_script_temp.R
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#STAGE 5: Output analyses-visualization of results for specific dates...
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#
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#AUTHOR: Benoit Parmentier
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#DATE: 04/21/2013
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#DATE: 05/01/2013
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#PROJECT: NCEAS INPLANT: Environment and Organisms --TASK#363, TASK$568--   


  		




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#/home/parmentier/Data/IPLANT_project/Venezuela_interpolation/Venezuela_01142013/climatology_03192013.py


  		




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source(file.path(script_path,"covariates_production_temperatures_03212013.R"))


  		




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source(file.path(script_path,"Database_stations_covariates_processing_function_04042013.R"))


  		




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source(file.path(script_path,"GAM_fusion_analysis_raster_prediction_multisampling_04162013.R"))


  		




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#source(file.path(script_path,"results_interpolation_date_output_analyses_04162013.R"))


  		




  
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source(file.path(script_path,"GAM_fusion_analysis_raster_prediction_multisampling_04302013.R"))


  		




  
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source(file.path(script_path,"results_interpolation_date_output_analyses_04302013.R"))


  		




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#source(file.path(script_path,"results_covariates_database_stations_output_analyses_04012013.R"))


  		




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#FUNCTIONS CALLED FROM GAM ANALYSIS RASTER PREDICTION ARE FOUND IN...


  		




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source(file.path(script_path,"sampling_script_functions_03122013.R"))


  		




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source(file.path(script_path,"GAM_fusion_function_multisampling_04162013.R")) #Include GAM_CAI


  		




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source(file.path(script_path,"GAM_fusion_function_multisampling_validation_metrics_04162013.R"))


  		




  
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source(file.path(script_path,"GAM_fusion_function_multisampling_04302013.R")) #Include GAM_CAI


  		




  
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source(file.path(script_path,"GAM_fusion_function_multisampling_validation_metrics_04302013.R"))


  		




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############ STAGE 1: LST Climatology ###############


  		




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  ......




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############## STAGE 5: OUTPUT ANALYSES ##################


  		




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#source(file.path(script_path,"results_interpolation_date_output_analyses_03272013.R"))


  		




  
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date_selected<-c("20100101") ##This is for year 2000!!!


  		




  
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#raster_prediction_obj<-load_obj("raster_prediction_obj_dailyTmin_365d_GAM_fus5_all_lstd_03292013.RData")


  		




  
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#raster_prediction_obj<-load_obj("raster_prediction_obj_gam_CAI_dailyTmax_365d_GAM_CAI_all_lst_04162013.RData")


  		




  
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#raster_prediciton_obj<-load_obj(paste("raster_prediction_obj","_","interpolation_method,


  		




  
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#                                y_var_name,out_prefix,sep="")


  		




  
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list_param_results_analyses<-list(in_path,out_path,script_path,raster_prediction_obj,interpolation_method,infile_covar,covar_names,date_selected,var,out_prefix)


  		




  
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names(list_param_results_analyses)<-c("in_path","out_path","script_path","raster_prediction_obj","interpolation_method",


  		




  
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                     "infile_covar","covar_names","date_selected","var","out_prefix")


  		




  
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#plots_assessment_by_date<-function(j,list_param){


  		




  
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plots_assessment_by_date(1,list_param_results_analyses)


  		




  
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#source(file.path(script_path,"results_interpolation_date_output_analyses_04302013.R"))


  		




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#Call as function...


  		




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###############   END OF SCRIPT   ###################


  		












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