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Revision 7145d96b

Added by Benoit Parmentier over 11 years ago

running GAM_CAI with comb3 for comparison, OR temp

View differences:

climate/research/oregon/interpolation/master_script_temp.R
78 78
met_stations_outfiles_obj_file<-"/data/project/layers/commons/data_workflow/output_data_365d_gam_fus_lst_test_run_07172013/met_stations_outfiles_obj_gam_fusion__365d_gam_fus_lst_test_run_07172013.RData"
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var<-"TMAX" # variable being interpolated
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out_prefix<-"_365d_kriging_cai_lst_comb3_07312013"                #User defined output prefix
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out_suffix<-"_OR_07312013"                                       #Regional suffix
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out_prefix<-"_365d_gam_cai_lst_comb3_08012013"                #User defined output prefix
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out_suffix<-"_OR_08012013"                                       #Regional suffix
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out_suffix_modis <-"_05302013"                       #pattern to find tiles produced previously     
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#interpolation_method<-c("gam_fusion","gam_CAI","gam_daily") #other otpions to be added later
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#interpolation_method<-c("gam_CAI") #other otpions to be added later
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interpolation_method<-c("gam_CAI") #other otpions to be added later
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#interpolation_method<-c("gam_fusion") #other otpions to be added later
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#interpolation_method<-c("kriging_fusion") #other otpions to be added later
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#interpolation_method<-c("gwr_fusion") #other otpions to be added later
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#interpolation_method<-c("gwr_CAI") #other otpions to be added later
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interpolation_method<-c("kriging_CAI") 
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#interpolation_method<-c("kriging_CAI") 
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#interpolation_method<-c("gam_daily") #other otpions to be added later
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#interpolation_method<-c("kriging_daily") #other otpions to be added later
......
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#LC1: Evergreen/deciduous needleleaf trees
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#Combination 3: for paper baseline=s(lat,lon)+s(elev)
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# list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(N_w)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(E_w)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(LST)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(LC1)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)",
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#               "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)")
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list_models<-c("y_var ~ lat*lon + elev_s",
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              "y_var ~ lat*lon + elev_s + N_w",
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              "y_var ~ lat*lon + elev_s + E_w",
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              "y_var ~ lat*lon + elev_s + LST",
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              "y_var ~ lat*lon + elev_s + DISTOC",
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              "y_var ~ lat*lon + elev_s + LC1",
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              "y_var ~ lat*lon + elev_s + CANHGHT",
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              "y_var ~ lat*lon + elev_s + LST + I(LST*LC1)",
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              "y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)")
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list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(N_w)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(E_w)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(LST)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(LC1)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)",
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              "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)")
265

  
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# list_models<-c("y_var ~ lat*lon + elev_s",
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#               "y_var ~ lat*lon + elev_s + N_w",
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#               "y_var ~ lat*lon + elev_s + E_w",
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#               "y_var ~ lat*lon + elev_s + LST",
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#               "y_var ~ lat*lon + elev_s + DISTOC",
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#               "y_var ~ lat*lon + elev_s + LC1",
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#               "y_var ~ lat*lon + elev_s + CANHGHT",
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#               "y_var ~ lat*lon + elev_s + LST + I(LST*LC1)",
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#               "y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)")
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#Default name of LST avg to be matched               
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lst_avg<-c("mm_01","mm_02","mm_03","mm_04","mm_05","mm_06","mm_07","mm_08","mm_09","mm_10","mm_11","mm_12")  

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