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73e9d9c6
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Giuseppe
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# calculate slope or area percent above a specific treshold eg 0-4.9 put 0 ; 5-9.9 put 5
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# for this case the treshold is set every 5 degrees
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# geting the integer of the altitued / 100
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# ls /mnt/data/jetzlab/Data/environ/global/dem_variables/slope/tiles/Smoothed_N*E*.tif | xargs -n 1 -P 36 bash /mnt/data/jetzlab/Data/environ/global/dem_variables/scripts/sc1_slope_treshold_percent.sh
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# too check
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# ny=45 ; for n in `seq 1 9` ;do echo ` gdallocationinfo -valonly tiles/Smoothed_N00E005.tif 2$n $ny` `gdallocationinfo -valonly class/class/Smoothed_N00E005_class.tif 2$n $ny` ; done
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export file=$1
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export filename=`basename $file .tif`
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(
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INDIR=/mnt/data/jetzlab/Data/environ/global/dem_variables/slope/tiles
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OUTDIR=/mnt/data/jetzlab/Data/environ/global/dem_variables/slope/class/class
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# calcualte slope every 5 degree using the the Int16 factors
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oft-calc -ot Byte $INDIR/$filename.tif $OUTDIR/$filename"_class_tmp1.tif" <<EOF
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1
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#1 2.5 - 5 /
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EOF
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oft-calc -inv -ot Byte $OUTDIR/$filename"_class_tmp1.tif" $OUTDIR/$filename"_class_tmp2.tif" <<EOF
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1
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#1 5 *
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EOF
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oft-calc -inv -ot Byte $OUTDIR/$filename"_class_tmp2.tif" $OUTDIR/$filename"_class_tmp3.tif" <<EOF
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1
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#1 0 < 0 #1 ?
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EOF
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gdal_translate -co COMPRESS=LZW -co ZLEVEL=9 $OUTDIR/$filename"_class_tmp3.tif" $OUTDIR/$filename"_class.tif"
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rm $OUTDIR/$filename"_class_tmp1.tif" $OUTDIR/$filename"_class_tmp2.tif" $OUTDIR/$filename"_class_tmp3.tif"
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gdalinfo -mm $OUTDIR/$filename"_class.tif" | grep Computed | awk '{ gsub ("[=,]"," "); print int($(NF-1)), int($(NF))}' > $OUTDIR/txt/$filename"_min_max.txt"
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for class in $(seq `awk '{ print $1}' $OUTDIR/txt/${filename}_min_max.txt` 5 `awk '{ print $2}' $OUTDIR/txt/${filename}_min_max.txt`) ; do
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class_start=$class
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class_end=$(awk '{ print $2}' $OUTDIR/txt/$filename"_min_max.txt")
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class_string=$(for class_unique in $(seq $class_start 5 $class_end ) ; do echo -n "-class $class_unique " ; done)
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echo applaid the filter for the classes $class_string
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pkfilter -dx 10 -dy 10 $class_string -f density -d 10 -i $OUTDIR/$filename"_class.tif" -o $OUTDIR/../class$class/$filename"_C"$class"Perc.tif" -co COMPRESS=LZW -co ZLEVEL=9 -ot Byte
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done
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) 2>&1 | tee /mnt/data/jetzlab/Data/environ/global/tif_tmp/log_of_$filename".txt"
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