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Revision a1721e6a

Added by Benoit Parmentier over 11 years ago

running gam daily comb3 OR with revised screening for paper analyses

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climate/research/oregon/interpolation/master_script_temp.R
80 80
#met_stations_outfiles_obj_file<-"met_stations_outfiles_obj_kriging_daily__365d_kriging_daily_mults10_lst_comb3_08062013.RData"
81 81

  
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var<-"TMAX" # variable being interpolated
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out_prefix<-"_365d_gam_day_lst_comb3_08132013"                #User defined output prefix
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out_suffix<-"_OR_08132013"                                       #Regional suffix
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out_prefix<-"_365d_gam_day_lst_comb4_08152013"                #User defined output prefix
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out_suffix<-"_OR_08152013"                                       #Regional suffix
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out_suffix_modis <-"_05302013"                       #pattern to find tiles produced previously     
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#interpolation_method<-c("gam_fusion","gam_CAI","gam_daily") #other otpions to be added later
......
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#LC1: Evergreen/deciduous needleleaf trees
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#Combination 3: for paper baseline=s(lat,lon)+s(elev)
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list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(N_w)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(E_w)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(LST)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(LC1)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)",
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               "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)")
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# list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(N_w)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(E_w)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(LST)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(LC1)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)",
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#                "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)")
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#Combination 4: for paper baseline=s(lat,lon)
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list_models<-c("y_var ~ s(lat,lon)",
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               "y_var ~ s(lat,lon) + s(elev_s)",
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               "y_var ~ s(lat,lon) + s(N_w)",
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               "y_var ~ s(lat,lon) + s(E_w)",
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               "y_var ~ s(lat,lon) + s(LST)",
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               "y_var ~ s(lat,lon) + s(DISTOC)",
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               "y_var ~ s(lat,lon) + s(LC1)",
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               "y_var ~ s(lat,lon) + s(CANHGHT)",
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               "y_var ~ s(lat,lon) + s(LST) + ti(LST,LC1)",
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               "y_var ~ s(lat,lon) + s(LST) + ti(LST,CANHGHT)")
268 280

  
269 281
#list_models<-c("y_var ~ lat*lon + elev_s")
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