Revision f1b2b657
Added by Benoit Parmentier over 8 years ago
| climate/research/oregon/interpolation/master_script_stage_7.R | ||
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#script_path <- "/home/parmentier/Data/IPLANT_project/env_layers_scripts" |
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script_path <- "/nobackupp8/bparmen1/env_layers_scripts" #path to script |
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function_mosaicing_functions <- "global_run_scalingup_mosaicing_function_04072016.R" #PARAM12
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function_mosaicing <-"global_run_scalingup_mosaicing_04072016b.R"
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function_mosaicing_functions <- "global_run_scalingup_mosaicing_function_04102016.R" #PARAM12
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function_mosaicing <-"global_run_scalingup_mosaicing_04082016.R"
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source(file.path(script_path,function_mosaicing)) #source all functions used in this script |
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source(file.path(script_path,function_mosaicing_functions)) #source all functions used in this script |
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| ... | ... | |
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#in_dir_tiles <- file.path(in_dir,"tiles") #this is valid both for Atlas and NEX |
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layers_option <- c("var_pred") #options are:
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#res_training, res_testing,ac_training, ac_testing, var_pred |
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tmp_files <- FALSE |
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#rasterOptions(maxmemory=1e+07,timer=TRUE) |
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list_param_run_mosaicing_prediction <- list(in_dir,y_var_name,interpolation_method,region_name, |
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mosaicing_method,out_suffix,out_suffix_str,metric_name,pred_mod_name,var_pred, |
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create_out_dir_param,day_to_mosaic_range,proj_str,file_format,NA_value,num_cores, |
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use_autokrige,infile_mask,df_assessment_files_name,mosaic_python, |
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python_bin,algorithm,match_extent,list_models,layers_option) |
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python_bin,algorithm,match_extent,list_models,layers_option,tmp_files)
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param_names <- c("in_dir","y_var_name","interpolation_method","region_name",
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"mosaicing_method","out_suffix","out_suffix_str","metric_name","pred_mod_name","var_pred", |
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"create_out_dir_param","day_to_mosaic_range","proj_str","file_format","NA_value","num_cores", |
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"use_autokrige","infile_mask","df_assessment_files_name","mosaic_python", |
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"python_bin","algorithm","match_extent","list_models","layers_option") |
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"python_bin","algorithm","match_extent","list_models","layers_option","tmp_files")
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names(list_param_run_mosaicing_prediction) <- param_names |
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#list_param_run_mosaicing_prediction |
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#debug(run_mosaicing_prediction_fun) |
Also available in: Unified diff
testing stage 7 mosaicing with layers options and temporary files removal