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Revision f3808703

Added by Benoit Parmentier over 11 years ago

gam day with screening of values, OR analyses for paper

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climate/research/oregon/interpolation/master_script_temp.R
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#STAGE 5: Output analyses: assessment of results for specific dates...
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#
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#AUTHOR: Benoit Parmentier                                                                       
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#DATE: 06/28/2013                                                                                 
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#DATE: 07/02/2013                                                                                 
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#PROJECT: NCEAS INPLANT: Environment and Organisms --TASK#363, TASK$568--   
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......
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clim_script <- file.path(script_path,"climatology_05312013.py") # LST climatology python script
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grass_setting_script <- file.path(script_path,"grass-setup.R") #Set up system shell environment for python+GRASS
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#source(file.path(script_path,"download_and_produce_MODIS_LST_climatology_06112013.R"))
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source(file.path(script_path,"covariates_production_temperatures_06272013.R"))
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source(file.path(script_path,"covariates_production_temperatures_07022013.R"))
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source(file.path(script_path,"Database_stations_covariates_processing_function_06112013.R"))
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source(file.path(script_path,"GAM_fusion_analysis_raster_prediction_multisampling_06082013.R"))
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source(file.path(script_path,"GAM_fusion_analysis_raster_prediction_multisampling_06112013.R"))
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source(file.path(script_path,"results_interpolation_date_output_analyses_06112013.R"))
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#source(file.path(script_path,"results_covariates_database_stations_output_analyses_04012013.R")) #to be completed
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#FUNCTIONS CALLED FROM GAM ANALYSIS RASTER PREDICTION ARE FOUND IN...
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source(file.path(script_path,"sampling_script_functions_03122013.R"))
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source(file.path(script_path,"GAM_fusion_function_multisampling_06112013.R")) #Include GAM_CAI
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source(file.path(script_path,"GAM_fusion_function_multisampling_07022013.R")) #Include GAM_CAI
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source(file.path(script_path,"interpolation_method_day_function_multisampling_06082013.R")) #Include GAM_day
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source(file.path(script_path,"GAM_fusion_function_multisampling_validation_metrics_05062013.R"))
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......
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stages_to_run<-c(0,2,3,4,5) #May decide on antoher strategy later on...
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var<-"TMAX" # variable being interpolated
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out_prefix<-"_365d_gam_fus_lst_06282013"                #User defined output prefix
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out_suffix<-"_OR_06282013"
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out_prefix<-"_365d_gam_day_lst_07032013"                #User defined output prefix
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out_suffix<-"_OR_07032013"
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out_suffix_modis <-"_05302013" #use tiles produce previously
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#interpolation_method<-c("gam_fusion","gam_CAI","gam_daily") #other otpions to be added later
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#interpolation_method<-c("gam_CAI") #other otpions to be added later
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interpolation_method<-c("gam_fusion") #other otpions to be added later
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#interpolation_method<-c("gam_daily") #other otpions to be added later
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#interpolation_method<-c("gam_fusion") #other otpions to be added later
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interpolation_method<-c("gam_daily") #other otpions to be added later
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#interpolation_method<-c("kriging_daily") #other otpions to be added later
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#interpolation_method<-c("gwr_daily") #other otpions to be added later
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