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# Date Author Comment
11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

10788 08/27/2013 10:34 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: added step to update inputs/.TNRS/data.sql to the now-refreshed TNRS sample data (this updating step is now automated)

9491 05/21/2013 07:24 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: use sh's -e (errexit) mode so errors in an invoked script cause the script to abort instead of burying the error in more output

9490 05/21/2013 07:19 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: documented that `make schemas/"$public"/uninstall` removes the previous results (since it may be confusing why it's prompting the user to uninstall the schema that is an output of the program)

9489 05/21/2013 07:16 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: don't need to run the import twice anymore because the accepted names are now included in the tnrs_input_name view that TNRS runs on

9488 05/21/2013 07:09 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: updated for current TNRS schema

9487 05/21/2013 06:47 PM Aaron Marcuse-Kubitza

bugfix: inputs/test_taxonomic_names/test_scrub: unset $n so it doesn't limit the # rows. it is set to 2 in the default test environment, so must be unset for n-sensitive programs that should be unlimited.

9486 05/21/2013 06:40 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: updated for current TNRS schema

5917 11/01/2012 05:15 AM Aaron Marcuse-Kubitza

Calls to `make inputs/.TNRS/cleanup`: Do `make inputs/.TNRS/tnrs_accepted/reinstall; make inputs/.TNRS/tnrs_other/reinstall` instead to use new split TNRS tables

5812 10/26/2012 04:35 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: `make inputs/.TNRS/reinstall`: Use new $schema_only option so that an empty TNRS schema is installed rather than one containing inputs/.TNRS/data.sql

5681 10/19/2012 05:22 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: Remove any previous version of public.test_taxonomic_names before renaming public to it

5680 10/19/2012 05:19 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: Fixed bug where public.sql export did not include the "CREATE SCHEMA public" statement, because pg_dump doesn't add it to backups, by using new schemas/rename/% make target to first rename the public schema and then exporting it

5668 10/19/2012 03:25 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub, README.TXT: Documented that `make schemas/public/reinstall` must come after TNRS restore to recreate the tnrs_input_name view, which has a dependency on the TNRS schema

5423 10/10/2012 11:22 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: Also export the results to inputs/test_taxonomic_names/_scrub/

5422 10/10/2012 11:06 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: Use regular for .. in loop with a list of what's being processed in each iteration (match_input_names, parse_accepted_names)

5414 10/10/2012 10:17 AM Aaron Marcuse-Kubitza

Added inputs/test_taxonomic_names/test_scrub