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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10031 over 11 years Aaron Marcuse-Kubitza bugfix: backups/.rsync_filter.download: need to...
  bin 10140 over 11 years Aaron Marcuse-Kubitza bugfix: bin/map: in_is_db: inline metadata valu...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10177 over 11 years Aaron Marcuse-Kubitza inputs/*/: added top-level Makefile which inclu...
  lib 10171 over 11 years Aaron Marcuse-Kubitza bugfix: lib/runscripts/table.run: need to run r...
  mappings 10173 over 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: cultivated, oldGr...
  planning 10142 over 11 years Aaron Marcuse-Kubitza planning/workflow/validation/: archived BIEN2 v...
  schemas 10161 over 11 years Aaron Marcuse-Kubitza schemas/util.sql: type_qual(), type_qual_name()...
  web 10175 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.5 KB 10126 over 11 years Aaron Marcuse-Kubitza bugfix: *Makefile: $(asAdmin) invocations of Po...
README.TXT 23.2 KB 10093 over 11 years Aaron Marcuse-Kubitza bugfix: /README.TXT: Maintenance: syncing ~/bie...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10177 07/06/2013 05:17 PM Aaron Marcuse-Kubitza

inputs/*/: added top-level Makefile which includes inputs/input.Makefile, so that make can be run directly on the datasrc dir without needing to specify `--makefile=../input.Makefile` (see input.Makefile $(selfMake))

10176 07/06/2013 05:05 PM Aaron Marcuse-Kubitza

added inputs/test_taxonomic_names/Taxon/header.csv

10175 07/06/2013 04:02 PM Aaron Marcuse-Kubitza

web/links/index.htm: updated to Firefox bookmarks. removed dead favicons. PostgreSQL: added bookmarks about triggers.

10174 07/06/2013 03:55 PM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: %/VegBIEN.csv: for new-style datasources, use a symlink to mappings/VegCore-VegBIEN.csv directly instead of prefiltering VegCore-VegBIEN.csv to include only the columns in map.csv. prefiltering used to be performed as part of mapping the map.csv VegCore output terms to VegBIEN using bin/join, but is no longer needed because the staging table columns are now VegCore terms. instead, the full VegCore-VegBIEN.csv is needed so that derived columns added in stage I or II validations are detected by bin/map (rather than just the original source columns in map.csv).

10173 07/06/2013 03:37 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: cultivated, oldGrowth: use just cultivated if it's provided, rather than /_alt-ing it back with oldGrowth (which it was generated from)

10172 07/06/2013 03:30 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: fixed priority of cultivated and oldGrowth so cultivated is used first if it's available

10171 07/06/2013 02:41 PM Aaron Marcuse-Kubitza

bugfix: lib/runscripts/table.run: need to run remake_VegBIEN_mappings after mk_derived rather than before so the derived cols will be included in the automated test result

10170 07/06/2013 02:26 PM Aaron Marcuse-Kubitza

bugfix: inputs/*/Source/: use installed staging table (with blank-line data.csv) in order to also work with new-style import. this also fixes a benign diff between the by-row and by-col test outputs, where row-based import would not import the Source/ entries because there was not at least one row in the input. note that in order to ensure that all datasources are properly run, you need to check `svn st|sort` against the datasource schema names to see if any are missing.

10169 07/06/2013 02:22 PM Aaron Marcuse-Kubitza

inputs/*/logs: updated svn:ignore

10168 07/06/2013 02:22 PM Aaron Marcuse-Kubitza

inputs/*/*/logs: updated svn:ignore

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