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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10031 over 11 years Aaron Marcuse-Kubitza bugfix: backups/.rsync_filter.download: need to...
  bin 10191 over 11 years Aaron Marcuse-Kubitza bin/map: removed no longer used support for map...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10209 over 11 years Aaron Marcuse-Kubitza inputs/*/*/map.csv for CSV tables with a row_nu...
  lib 10217 over 11 years Aaron Marcuse-Kubitza bugfix: lib/sh/util.sh: sed: must use alias ins...
  mappings 10173 over 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: cultivated, oldGr...
  planning 10216 over 11 years Aaron Marcuse-Kubitza archived planning/goals/BIEN3_derived_data_prod...
  schemas 10185 over 11 years Aaron Marcuse-Kubitza schemas/util.sql: added table_nulls_mapped__get...
  web 10175 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.5 KB 10126 over 11 years Aaron Marcuse-Kubitza bugfix: *Makefile: $(asAdmin) invocations of Po...
README.TXT 23.2 KB 10093 over 11 years Aaron Marcuse-Kubitza bugfix: /README.TXT: Maintenance: syncing ~/bie...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10217 07/10/2013 03:41 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: sed: must use alias instead of function because function causes segfault in redir() subshell when used with make.sh make() filter (may be bug in bash?). this involves translating `unset LANG` to `env LANG=` (`env -u` to unset a var isn't supported on Mac, but fortunately sed treats LANG="" the same as unset LANG).

10216 07/10/2013 03:06 PM Aaron Marcuse-Kubitza

archived planning/goals/BIEN3_derived_data_products.docx and replaced with symlink to new BIEN_3_derived_data_products_NormalizedDB_only.docx

10215 07/10/2013 02:59 PM Aaron Marcuse-Kubitza

added planning/goals/BIEN_3_derived_data_products_NormalizedDB_only.docx from Brad's e-mail

10214 07/10/2013 02:42 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: sed: unset LANG to avoid "illegal byte sequence" errors on invalid UTF-8 for LANG=*.UTF-8. these occur e.g. with MySQL data that is in Latin-1.

10213 07/10/2013 02:36 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: sed: use function instead of alias so that env can be set up before calling sed

10212 07/10/2013 02:15 PM Aaron Marcuse-Kubitza

planning/workflow/bien3_architecture.pptx: updated to Martha's revised version from 2013-7-3

10211 07/10/2013 04:13 AM Aaron Marcuse-Kubitza

lib/runscripts/table.run: map_table(): run map_table repeatedly until no more renames are made: added command to do this

10210 07/10/2013 03:53 AM Aaron Marcuse-Kubitza

lib/runscripts/table.run: map_table(): documented that collisions may prevent all renames from being made at once. if this is the case, map_table must be run repeatedly until no more renames are made. collisions may result if the staging table gets messed up (e.g. due to missing input columns in map.csv).

10209 07/10/2013 02:32 AM Aaron Marcuse-Kubitza

inputs/*/*/map.csv for CSV tables with a row_num column: added missing row_num entry, which is needed by the staging table column renaming to make the order of the map.csv columns match the order in the staging table

10208 07/10/2013 02:27 AM Aaron Marcuse-Kubitza

bugfix: inputs/*/Source/map.csv: added missing row_num entry, which is needed by the staging table column renaming to make the order of the map.csv columns match the order in the staging table. the staging table column renaming is now used by all Source tables.

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