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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10609 over 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated for last backup
  bin 10599 over 11 years Aaron Marcuse-Kubitza bugfix: bin/import_times: filtering out the Sou...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10668 over 11 years Aaron Marcuse-Kubitza inputs/VegBIEN/db/.htaccess: allow access to sc...
  lib 10649 over 11 years Aaron Marcuse-Kubitza lib/sh/db.sh: mysqldump(): added create_db=1 fl...
  mappings 10616 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: regenerated from wiki. ad...
  planning 10667 over 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: rebalanced...
  schemas 10664 over 11 years Aaron Marcuse-Kubitza schemas/VegCore/VegCore.ERD.mwb: geovalidation:...
  web 10612 over 11 years Aaron Marcuse-Kubitza bugfix: web/.htaccess: parse dotpath in query s...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.6 KB 10539 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres-Linux: phppgadmin.c...
README.TXT 23.7 KB 10603 over 11 years Aaron Marcuse-Kubitza /README.TXT: Full database import: min disk spa...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10668 08/10/2013 11:55 PM Aaron Marcuse-Kubitza

inputs/VegBIEN/db/.htaccess: allow access to schemas other than the public schema by requiring a schema before the table. currently, this does not break any existing URLs.
10667 08/09/2013 01:57 PM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: rebalanced between the months. Geoscrubbing re-run: extended to September since it's not clear when Jim will have time for this.
10666 08/09/2013 01:53 PM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: split Data provider validations (spot-checking) into separate tasks for VegBIEN and VegCore
10665 08/09/2013 01:49 PM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: updated for July progress
10664 08/09/2013 01:25 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: geovalidation: added step at end to georeference all places to corrected_geoplace
10663 08/09/2013 12:51 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: moved all required fields before optional fields
10662 08/09/2013 12:39 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: regenerated exports and udpated image map
10661 08/09/2013 12:23 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: individual: identifying_place: documented that for specimens, this is the place the specimen was collected at. within_place: documented that this is not specified for specimens since their coordinates are usually not precise enough to identify an individual. specimen: documented that when there are multiple specimen replicates (copies) of a specimen, each gets its own specimen_observation pointing to the same specimen.
10660 08/09/2013 12:12 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: individual: added identifying_place since some individuals may be identified by their coordinates rather than a tag
10659 08/09/2013 12:06 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: added back aggregate_observation as a superclass of taxon_absence, taxon_presence. have only aggregate_observation, not taxon_observation, inherit from taxa_sampling_event because taxa_sampling_event is designed for multiple or aggregate samplings, but taxon_observation can be for just one occurrence. taxa_sampling_event: added required within_place since taxa must be sampled within a particular place. individual.place: renamed to within_place to clarify that each individual does not necessarily need its own place instance. individual_observation: added place_observed_at to serve the role that individual.place previously did (the place of an individual may change between observations).

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