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Name Size Revision Age Author Comment
  BIEN2 10896 about 11 years Aaron Marcuse-Kubitza added BIEN2/traits_observation_counts.xls
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  backups 11620 about 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 11456 about 11 years Aaron Marcuse-Kubitza bugfix: bin/with_all: @inputs default value: us...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  derived 11591 about 11 years Aaron Marcuse-Kubitza derived/biengeo/load-geoscrub-input.sh: allow t...
  exports 11599 about 11 years Aaron Marcuse-Kubitza exports/2013-7-10.Naia.range_limiting_factors.c...
  inputs 11619 about 11 years Aaron Marcuse-Kubitza inputs/.TNRS/schema.sql: removed no longer used...
  lib 11605 about 11 years Aaron Marcuse-Kubitza lib/sh/util.sh: already_exists_msg(): added ins...
  mappings 11513 about 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: mapped taxon_dete...
  planning 11596 about 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: updated fo...
  schemas 11622 about 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_stem_view, etc....
  web 11403 about 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.7 KB 11150 about 11 years Aaron Marcuse-Kubitza /Makefile: mk_db: config/users.sql: unset ON_ER...
README.TXT 24.9 KB 11573 about 11 years Aaron Marcuse-Kubitza /README.TXT: Full database import: after import...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 511 Bytes 11590 about 11 years Aaron Marcuse-Kubitza /run: use new exports/geoscrub_input.csv.run
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
11622 11/09/2013 10:02 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view, etc.: renamed scrubbed fields with the scrubbed_* prefix, to clearly distinguish these from the equivalent fields for other taxon names
11621 11/09/2013 09:10 PM Aaron Marcuse-Kubitza

bugfix: schemas/vegbien.sql: analytical_stem_view: family, genus: need to COALESCE these to the matched* when no accepted* is available
11620 11/09/2013 06:04 PM Aaron Marcuse-Kubitza

backups/TNRS.backup.md5: updated
11619 11/09/2013 04:47 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: removed no longer used score_ok(). use tnrs.Is_plant instead. (the threshold is still documented in tnrs_populate_fields().)
11618 11/09/2013 04:45 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: tnrs_populate_fields(): is_valid_match: don't consider Max_score because Is_plant will always be false when the Max_score is insufficient (<0.8)
11617 11/09/2013 04:20 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: schema comment: added steps to remake schema.sql and back up the new TNRS schema. documented that these steps should be run on vegbiendev.
11616 11/09/2013 04:16 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: schema comment: added steps to determine what changes need to be made on vegbiendev
11615 11/09/2013 04:01 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: tnrs_populate_fields(): regenerate the derived cols: updated runtimes (~same)
11614 11/09/2013 03:54 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: tnrs: moved instructions to apply schema changes on vegbiendev to the TNRS schema, because this applies to all elements in the TNRS schema, not just the tnrs table
11613 11/09/2013 03:30 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: score_ok(): don't make it STRICT because this prevents it from being inlined

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