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| Revision:
Name Size Revision Age Author Comment
  BIEN2 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 12225 over 10 years Aaron Marcuse-Kubitza _license/non-open-source/applies_to.txt: clarif...
  backups 12176 over 10 years Aaron Marcuse-Kubitza added backups/vegbien.r12025.backup.md5
  bin 12742 over 10 years Aaron Marcuse-Kubitza bin/repl: text mode: also match w/ suffix (eg. ...
  config 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  derived 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  exports 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  inputs 12714 over 10 years Aaron Marcuse-Kubitza added inputs/run, which runs all the inputs' ru...
  issues 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 12743 over 10 years Aaron Marcuse-Kubitza bugfix: lib/runscripts/table.run: custom_postpr...
  mappings 12039 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: verify/%.out: use a *.sq...
  planning 12613 over 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 12734 over 10 years Aaron Marcuse-Kubitza bugfix: schemas/util.sql: set_col_types(): need...
  validation 12682 over 10 years Aaron Marcuse-Kubitza validation/aggregating/plots/bien3_validations_...
  web 12704 over 10 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
  wiki 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.18 KB 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
Makefile 13.4 KB 12548 over 10 years Aaron Marcuse-Kubitza /Makefile: added separate phppgadmin-Linux targ...
README.TXT 28.5 KB 12741 over 10 years Aaron Marcuse-Kubitza bugfix: /README.TXT: Maintenance: VegCore data ...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 511 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
12743 03/18/2014 04:04 AM Aaron Marcuse-Kubitza

bugfix: lib/runscripts/table.run: custom_postprocess(): need to apply renames to SQL statements in postprocess.sql before it can be run

12742 03/18/2014 04:03 AM Aaron Marcuse-Kubitza

bin/repl: text mode: also match w/ suffix (eg. _verbatim)

12741 03/18/2014 02:59 AM Aaron Marcuse-Kubitza

bugfix: /README.TXT: Maintenance: VegCore data dictionary: apply new data dict mappings: need to use postprocess rather than import runscript target, so that the command also works on an svn checkout without the flat files (the flat files are not needed for the staging table renaming)

12740 03/15/2014 07:20 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: psql(): $verbose_ok: renamed to $bypass_ok for clarity, because this applies only to the `--output /dev/fd/41` bypass (which when not possible, requires turning off verbose output

12739 03/15/2014 07:15 PM Aaron Marcuse-Kubitza

fix: lib/sh/db.sh: psql(): added $output_data switch analogous to what mysql() has. this causes query results of eg. void-returning functions to be correctly filtered by the logging mechanism, rather than output to stdout.

12738 03/15/2014 06:42 PM Aaron Marcuse-Kubitza

fix: lib/sh/db.sh: psql(): verbosity=0 (errors only) mode: use `SET client_min_messages = WARNING;` instead of NOTICE to hide verbose messages within psql as well

12737 03/15/2014 06:31 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: psql(): replaced `test "$verbose_ok" && can_log` with bool var $verbose_

12736 03/15/2014 06:29 PM Aaron Marcuse-Kubitza

fix: lib/sh/db.sh: psql(): $verbose_: renamed to $verbose_ok for clarity

12735 03/15/2014 06:13 PM Aaron Marcuse-Kubitza

fix: lib/sh/util.sh: stdout_contains(): add another pipe_delay because the `grep` statement was sometimes getting printed before its filtered output

12734 03/15/2014 05:47 PM Aaron Marcuse-Kubitza

bugfix: schemas/util.sql: set_col_types(): need to COALESCE the executed SQL to '' because util.eval() does not support NULL (and shouldn't, because this indicates a missing COALESCE in constructing the statement)

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