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root/trunk @ 12870

Name Size Revision Age Author Comment
  BIEN2 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 12225 almost 11 years Aaron Marcuse-Kubitza _license/non-open-source/applies_to.txt: clarif...
  backups 12176 almost 11 years Aaron Marcuse-Kubitza added backups/vegbien.r12025.backup.md5
  bin 12754 over 10 years Aaron Marcuse-Kubitza bugfix: bin/repl: only use excluded_prefix_re/e...
  config 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  derived 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  exports 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  inputs 12869 over 10 years Aaron Marcuse-Kubitza inputs/XAL/Specimen/test.xml.ref: updated for s...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 12870 over 10 years Aaron Marcuse-Kubitza lib/sh/util.sh: added plain()
  mappings 12039 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: verify/%.out: use a *.sq...
  planning 12613 over 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 12819 over 10 years Aaron Marcuse-Kubitza added schemas/VegCore.ERD.pdf symlink for easy ...
  validation 12682 over 10 years Aaron Marcuse-Kubitza validation/aggregating/plots/bien3_validations_...
  web 12704 over 10 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
  wiki 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.18 KB 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
Makefile 13.4 KB 12548 over 10 years Aaron Marcuse-Kubitza /Makefile: added separate phppgadmin-Linux targ...
README.TXT 28.5 KB 12752 over 10 years Aaron Marcuse-Kubitza inputs/run: postprocess(): documented runtime (...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 499 Bytes 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
12870 03/22/2014 05:59 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added plain()
12869 03/22/2014 05:56 AM Aaron Marcuse-Kubitza

inputs/XAL/Specimen/test.xml.ref: updated for sample data.csv, which contains the columns as a CSV. this fixes a bug where a map.csv must be used on a table that contains the same set of columns (ie. not one with no columns if there are any mappings).
12868 03/22/2014 05:50 AM Aaron Marcuse-Kubitza

bugfix: lib/sql_io.py: put_table(): is_literals: `return sql.value(cur): need to use sql.value_or_none() instead to support multi-row functions, such as _split() used in specimens data`
12867 03/22/2014 05:06 AM Aaron Marcuse-Kubitza

fix: inputs/input.Makefile: don't treat *.xml as data files since these are not currently supported
12866 03/22/2014 04:55 AM Aaron Marcuse-Kubitza

lib/runscripts/util.run: on_exit(): documented that users can also override gateway()/fallback() to perform other commands (or no commands) after the script is read
12865 03/22/2014 04:53 AM Aaron Marcuse-Kubitza

bugfix: lib/sh/db.sh: pg_table_exists(): need ! to negate boolean result
12864 03/22/2014 04:44 AM Aaron Marcuse-Kubitza

fix: lib/runscripts/table.run: table_make_install(): need to inform the user when it skips installing a table, because this is often unexpected
12863 03/22/2014 04:43 AM Aaron Marcuse-Kubitza

fix: lib/runscripts/util.run: run_args_cmd(): need to indent the output of the target that it's running
12862 03/22/2014 04:15 AM Aaron Marcuse-Kubitza

lib/runscripts/table.run: removed no longer used datasrc_make_install()
12861 03/22/2014 04:07 AM Aaron Marcuse-Kubitza

fix: lib/sh/util.sh: fade(): use medium gray instead of light gray because it fades on white and black backgrounds

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