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| Revision:
Name Size Revision Age Author Comment
  BIEN2 12779 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 13771 over 10 years Aaron Marcuse-Kubitza schemas/VegBIEN/taxonomy/: moved into schemas/V...
  backups 13902 over 10 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 13985 over 10 years Aaron Marcuse-Kubitza bugfix: bin/import_all: now that always using l...
  config 13973 over 10 years Aaron Marcuse-Kubitza fix: config/VirtualBox_VMs/vegbiendev/README.TX...
  derived 13854 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/web_app/protocol/
  downloads 13537 over 10 years Aaron Marcuse-Kubitza added downloads/
  exports 13929 over 10 years Aaron Marcuse-Kubitza exports/2014-6-4.Iara_Lacher.reserve_prioritiza...
  inputs 13975 over 10 years Aaron Marcuse-Kubitza fix: inputs/.geoscrub/geoscrub_output/: added _...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 13860 over 10 years Aaron Marcuse-Kubitza lib/tnrs.py: dirty: documented that this actual...
  mappings 13947 over 10 years Aaron Marcuse-Kubitza fix: mappings/VegCore-VegBIEN.csv: mapped DwC y...
  planning 13880 over 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 13962 over 10 years Aaron Marcuse-Kubitza schemas/util.sql: replace_words(): use map_word...
  validation 13963 over 10 years Aaron Marcuse-Kubitza validation/completeness/BIENDatesPopulated.xlsx...
  web 13831 over 10 years Aaron Marcuse-Kubitza bugfix: web/.phpPgAdmin/.htaccess: : handlers: ...
  wiki 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.17 KB 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
Makefile 12.7 KB 13848 over 10 years Aaron Marcuse-Kubitza /Makefile, lib/phpPgAdmin.login.php.diff: publi...
README.TXT 34 KB 13942 over 10 years Aaron Marcuse-Kubitza bugfix: /README.TXT: to synchronize vegbiendev,...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
13985 07/11/2014 09:13 AM Aaron Marcuse-Kubitza

bugfix: bin/import_all: now that always using log files to fix output clutter, need to delete created logs if logging is turned off

13984 07/11/2014 08:45 AM Aaron Marcuse-Kubitza

bugfix: bin/import_all: don't errexit if a background process is Ctrl-C'd

13983 07/11/2014 08:41 AM Aaron Marcuse-Kubitza

bugfix: bin/import_all: was run without initial "." test: don't exit nonzero because this will close the subshell

13982 07/11/2014 08:38 AM Aaron Marcuse-Kubitza

bugfix: bin/import_all: ensure that this is run in a subshell, which is needed so errexits don't close the terminal window

13981 07/11/2014 08:32 AM Aaron Marcuse-Kubitza

bin/import_all: documented that this must be run in a subshell (obtained by running `$0`)

13980 07/11/2014 08:25 AM Aaron Marcuse-Kubitza

bugfix: bin/import_all: need to always use log files for background processes

13979 07/11/2014 08:12 AM Aaron Marcuse-Kubitza

fix: bin/import_all: Source/import: don't use by_col=1 for this because it's slower for small #s of rows. by_col mode is no longer needed for metadata-only tables because these tables now have a single empty row so that they also work in row-based mode.

13978 07/11/2014 08:06 AM Aaron Marcuse-Kubitza

fix: bin/import_all: hidden srcs: use with_all for this to avoid needing to list every source, and to display the backgrounded command with the variables substituted

13977 07/11/2014 07:40 AM Aaron Marcuse-Kubitza

bin/import_all: TNRS, geoscrub: integrated into the list of metadata sources

13976 07/11/2014 07:39 AM Aaron Marcuse-Kubitza

bin/import_all: TNRS, geoscrub: use import rather than publish because the non-imported tables have now been excluded

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