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| Revision:
Name Size Revision Age Author Comment
  BIEN2 12779 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 14301 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  backups 14817 about 10 years Aaron Marcuse-Kubitza fix: *Makefile: changed line endings to \n so t...
  bin 14732 over 10 years Aaron Marcuse-Kubitza bugfix: bin/make: don't run verbosity_compat un...
  config 14817 about 10 years Aaron Marcuse-Kubitza fix: *Makefile: changed line endings to \n so t...
  derived 14298 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  downloads 13537 over 10 years Aaron Marcuse-Kubitza added downloads/
  exports 14839 about 10 years Aaron Marcuse-Kubitza exports/view_full_occurrence_CVS.csv.run: docum...
  inputs 14860 about 10 years Aaron Marcuse-Kubitza inputs/Cyrille_traits/trait_observation/postpro...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 14857 about 10 years Aaron Marcuse-Kubitza bugfix: lib/sh/sync.sh, db.sh: *_snapshot() com...
  mappings 14817 about 10 years Aaron Marcuse-Kubitza fix: *Makefile: changed line endings to \n so t...
  planning 14830 about 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 14861 about 10 years Aaron Marcuse-Kubitza schemas/public_.sql: view_full_occurrence_indiv...
  validation 13963 over 10 years Aaron Marcuse-Kubitza validation/completeness/BIENDatesPopulated.xlsx...
  web 14835 about 10 years Aaron Marcuse-Kubitza web/BIEN3/Redmine/issues/.htaccess: dest: decod...
  wiki 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.17 KB 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
Makefile 12.7 KB 14817 about 10 years Aaron Marcuse-Kubitza fix: *Makefile: changed line endings to \n so t...
README.TXT 39.2 KB 14824 about 10 years Aaron Marcuse-Kubitza /README.TXT: To re-run geoscrubbing: re-create ...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
14861 10/23/2014 03:43 PM Aaron Marcuse-Kubitza

schemas/public_.sql: view_full_occurrence_individual_view: join to taxonoccurrence: can use a USING join for this because plot.** only exports one locationevent_id column

14860 10/20/2014 03:33 PM Aaron Marcuse-Kubitza

inputs/Cyrille_traits/trait_observation/postprocess.sql: accessRights index: added vegbiendev runtime

14859 10/20/2014 03:29 PM Aaron Marcuse-Kubitza

fix: inputs/Cyrille_traits/trait_observation/postprocess.sql: need to remove private data, as clarified by Cyrille

14858 10/20/2014 03:13 PM Aaron Marcuse-Kubitza

inputs/publishable datasources.xlsx: updated: Cyrille traits: updated with Cyrille's clarifications on publishability

14857 10/19/2014 03:24 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/sync.sh, db.sh: *_snapshot() commands that run multiple sudo commands: use become_sudo so that the program won't hang at later sudo prompts. for pg_snapshot() with pg_start_backup(), this also prevents the backup from staying open at the end waiting on a sudo prompt, causing excess WAL logs to accrue.

14856 10/19/2014 03:16 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: become_sudo: documented that this is for funcs that run multiple sudo commands

14855 10/19/2014 03:15 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: $sudo_cmd_wrapper: use esc() so this does not need to be embedded with [@] array notation

14854 10/19/2014 03:09 PM Aaron Marcuse-Kubitza

bugfix: lib/runscripts/util.run: $wrap_fn: this always needs to contain `is_runscript=1` because $is_runscript is not (and cannot be) exported

14853 10/19/2014 03:06 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: sudo(): when don't need sudo: do need `command` to have effects of invoking external command

14852 10/19/2014 03:00 PM Aaron Marcuse-Kubitza

fix: lib/sh/db.sh: pg_snapshot(): first need to run pg_stop_backup() in case a backup was not stopped cleanly

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