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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  bin 1985 about 12 years Aaron Marcuse-Kubitza bin/map: Fixed bug where mapping to same DB wou...
  config 272 over 12 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 1986 about 12 years Aaron Marcuse-Kubitza input.Makefile: Testing: Added test/import.%.st...
  lib 1981 about 12 years Aaron Marcuse-Kubitza sql.py: qual_name(): Fixed bugs where esc_name(...
  mappings 1843 about 12 years Aaron Marcuse-Kubitza mappings: Build VegX-VegBIEN.organisms.csv from...
  schemas 1966 about 12 years Aaron Marcuse-Kubitza schemas/postgresql.Mac.conf: Set unix_socket_di...
  to_do 811 over 12 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 8.5 KB 1980 about 12 years Aaron Marcuse-Kubitza main Makefile: $(psqlAsAdmin): Tell sudo to pre...
README.TXT 2.7 KB 1967 about 12 years Aaron Marcuse-Kubitza main Makefile: VegBIEN DB: Install public schem...
map 978 Bytes 1979 about 12 years Aaron Marcuse-Kubitza root map: Fill in defaults for inputs from VegB...

Latest revisions

# Date Author Comment
1986 04/24/2012 06:11 PM Aaron Marcuse-Kubitza

input.Makefile: Testing: Added test/import.%.staging.out test to test the staging tables. Sources: cat: Updated Usage comment to include the "inputs/<datasrc>/" prefix the user would need to add when running make.

1985 04/24/2012 05:33 PM Aaron Marcuse-Kubitza

bin/map: Fixed bug where mapping to same DB wouldn't work because by-column optimization wasn't implemented yet, by turning it off by default and allowing it to be enabled with an env var

1984 04/24/2012 05:25 PM Aaron Marcuse-Kubitza

bin/map: DB inputs: Use by-column optimization if mapping to same DB (with skeleton code for optimization's implementation)

1983 04/24/2012 05:12 PM Aaron Marcuse-Kubitza

input.Makefile: Mapping: Use the staging tables instead of any flat files if use_staged is specified

1982 04/24/2012 05:10 PM Aaron Marcuse-Kubitza

bin/map: Support custom schema name. Support input table/schema override via env vars, in case the map spreadsheet was written for a different input format.

1981 04/24/2012 05:01 PM Aaron Marcuse-Kubitza

sql.py: qual_name(): Fixed bugs where esc_name() nested func couldn't have same name as outer func, and esc_name() needed to be invoked without the module name because it's in the same module. select(): Support already-escaped table names.

1980 04/24/2012 04:16 PM Aaron Marcuse-Kubitza

main Makefile: $(psqlAsAdmin): Tell sudo to preserve env vars so PGOPTIONS is passed to psql

1979 04/24/2012 03:33 PM Aaron Marcuse-Kubitza

root map: Fill in defaults for inputs from VegBIEN, as well as outputs to it

1978 04/24/2012 02:59 PM Aaron Marcuse-Kubitza

disown_all: Updated to use main function, local vars, $self, etc. like other bash scripts run using "."

1977 04/24/2012 02:55 PM Aaron Marcuse-Kubitza

vegbien_dest: Fixed bug where it would give a usage error if run from a makefile rule, because the BASH_LINENO would be 0, by also checking if ${BASH_ARGV0} is ${BASH_SOURCE0}

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