Project

General

Profile

1 3830 aaronmk
VegCSV[DwC],VegBIEN:,Comments,Source,Order
2 3831 aaronmk
//plot/area,/location/area,,,
3
//geospatial/verbatimElevation,/location/elevation/_alt/1,,,
4 3834 aaronmk
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,72
5 3831 aaronmk
//geospatial/maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,,
6
//geospatial/minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,,
7 3834 aaronmk
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
8 3831 aaronmk
//geospatial/minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,,
9 3834 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
10
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/,72
11
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
12 3831 aaronmk
//geospatial/maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,,
13
//plot/landform,/location/landform,,,
14
//geospatial/CoordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy,,,
15 3834 aaronmk
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,http://rs.tdwg.org/dwc/terms/,88
16
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,http://rs.tdwg.org/dwc/terms/,89
17 3830 aaronmk
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,,DwC,91
18 3831 aaronmk
//geospatial/DecimalLatitude,/location/locationdetermination/latitude,,,
19 3834 aaronmk
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,85
20
verbatimLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,81
21 3831 aaronmk
//geospatial/DecimalLongitude,/location/locationdetermination/longitude,,,
22 3834 aaronmk
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,86
23
verbatimLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,82
24 3830 aaronmk
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,DwC,66
25
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,DwC,65
26
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,DwC,63
27
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,DwC,59
28 3831 aaronmk
//plotObservation/simpleUserdefined[name=method]/*ID/method/name,/location/locationevent/*_id/method/name,,,
29
//project/title[@id=name],/location/locationevent/*_id/project/projectname,,,
30
//project/title[@id=sourceAccessionCode],/location/locationevent/*_id/project/sourceaccessioncode,,,
31
//plot/plotName,/location/locationevent/authorlocationcode,,,
32
//*s/communityDetermination/*s/communityConcept/commonName,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,,,
33
//*s/communityDetermination/*s/communityConcept/name,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,,,
34
//*s/plotObservation/obsEndDate,/location/locationevent/obsenddate,,,
35 3834 aaronmk
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,,http://rs.tdwg.org/dwc/terms/,44
36 3831 aaronmk
//*s/plotObservation/obsStartDate,/location/locationevent/obsstartdate,,,
37 3834 aaronmk
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,,http://rs.tdwg.org/dwc/terms/,44
38 3831 aaronmk
//plot/plotUniqueIdentifier,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,,,
39
//plot/plotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,,
40
//plot/plotName,/location/locationevent/parent_id/locationevent/authorlocationcode,,,
41
//plot/plotUniqueIdentifier,/location/locationevent/parent_id/locationevent/sourceaccessioncode,,,
42
//plotObservation/simpleUserdefined[name=precipitation]/value,/location/locationevent/precipitation,,,
43
//abioticObservation/simpleUserdefined[name=acidity]/value,/location/locationevent/soilobs/acidity,,,
44
//abioticObservation/simpleUserdefined[name=base]/value,/location/locationevent/soilobs/basesaturation,,,
45
//abioticObservation/simpleUserdefined[name=calcium]/value,/location/locationevent/soilobs/calcium,,,
46
//abioticObservation/simpleUserdefined[name=carbon]/value,/location/locationevent/soilobs/carbon,,,
47
//abioticObservation/simpleUserdefined[name=cationExchangeCapacity]/value,/location/locationevent/soilobs/cationexchangecapacity,,,
48
//abioticObservation/simpleUserdefined[name=clay]/value,/location/locationevent/soilobs/clay,,,
49
//abioticObservation/simpleUserdefined[name=conductivity]/value,/location/locationevent/soilobs/conductivity,,,
50
//*s/abioticObservation/magnesium,/location/locationevent/soilobs/magnesium,,,
51
//*s/abioticObservation/nitrogen,/location/locationevent/soilobs/nitrogen,,,
52
//abioticObservation/simpleUserdefined[name=organic]/value,/location/locationevent/soilobs/organic,,,
53
//*s/abioticObservation/ph,/location/locationevent/soilobs/ph,,,
54
//*s/abioticObservation/phosphorus,/location/locationevent/soilobs/phosphorus,,,
55
//*s/abioticObservation/potassium,/location/locationevent/soilobs/potassium,,,
56
//abioticObservation/simpleUserdefined[name=sand]/value,/location/locationevent/soilobs/sand,,,
57
//abioticObservation/simpleUserdefined[name=silt]/value,/location/locationevent/soilobs/silt,,,
58
//abioticObservation/simpleUserdefined[name=sodium]/value,/location/locationevent/soilobs/sodium,,,
59
//abioticObservation/simpleUserdefined[name=texture]/value,/location/locationevent/soilobs/texture,,,
60
//plot/plotUniqueIdentifier,/location/locationevent/sourceaccessioncode,,,
61 3834 aaronmk
catalogNumber,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
62
collectionCode,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
63
recordNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/1,,http://rs.tdwg.org/dwc/terms/,22
64
collectionID,/location/locationevent/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/,9
65
fieldNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",http://rs.tdwg.org/dwc/terms/,53
66
sex,"/location/locationevent/specimenreplicate/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/,26
67
fieldNotes,/location/locationevent/specimenreplicate/description/_merge/1,,http://rs.tdwg.org/dwc/terms/,54
68
taxonRemarks,/location/locationevent/specimenreplicate/description/_merge/2,,http://rs.tdwg.org/dwc/terms/,158
69
establishmentMeans,"/location/locationevent/specimenreplicate/growthform/_map:[./{tree,shrub,liana,vine,herb,hemiepiphyte,epiphyte,grass,forb,moss,lichen,fungus,""floating aquatic"",""submerged aquatic""}=*,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
70
institutionCode,/location/locationevent/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/,11
71
establishmentMeans,"/location/locationevent/specimenreplicate/iscultivated/_map:[cultivated=t,wild=f,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
72
establishmentMeans,"/location/locationevent/specimenreplicate/isnative/_map:[native=t,exotic=f,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
73
occurrenceID,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
74
dateIdentified,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,http://rs.tdwg.org/dwc/terms/,120
75
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
76
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
77
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
78
recordedBy,/location/locationevent/specimenreplicate/verbatimcollectorname,,http://rs.tdwg.org/dwc/terms/,23
79 3831 aaronmk
//*s/taxonDetermination[role=collector]/groupType,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/cond/_eq:[right=direct]/left,,,
80
//taxonNameUsageConcept/voucher,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/else/voucher/*_id/specimenreplicate/catalognumber_dwc,,,
81
//individualOrganismObservation/simpleUserdefined[name=collectionDate]/value,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/else/voucher/*_id/specimenreplicate/collectiondate,,,
82
//taxonNameUsageConcept/voucher,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/then/aggregateoccurrence:[@merge=1]/plantobservation:[@merge=1]/specimenreplicate/catalognumber_dwc,,,
83
//individualOrganismObservation/simpleUserdefined[name=collectionDate]/value,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/then/aggregateoccurrence:[@merge=1]/plantobservation:[@merge=1]/specimenreplicate/collectiondate,,,
84
//*s/aggregateOrganismObservation/*/aggregateValue/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,,,
85
//ordinal/coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,,
86
//individualOrganismObservation/simpleUserdefined[name=censusNo]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",,,
87
//*s/individualOrganismObservation/volumeCanopy/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,,,
88
//individualOrganismObservation/simpleUserdefined[name=authorPlantCode]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
89
//*s/individualOrganismObservation/height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,,
90
//individualOrganismObservation/simpleUserdefined[name=height]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,,
91
//individualOrganismObservation/simpleUserdefined[name=sourceAccessionCode]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
92
//*s/aggregateOrganismObservation/*/aggregateValue/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,,
93
//individualOrganismObservation/diameterBaseDistance[value=0]/diameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,,,
94
//individualOrganismObservation/simpleUserdefined[name=canopyForm]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,,
95
//individualOrganismObservation/simpleUserdefined[name=canopyPosition]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,,
96
//individualOrganismObservation/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",,,
97
//individualOrganismObservation/simpleUserdefined[name=lianaInfestation]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,,
98
//note/text,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,,
99
//individualOrganismObservation/diameterBaseDistance[baseDistance[]/value=1.37]/diameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,,,
100
//individualOrganismObservation/simpleUserdefined[name=height]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,,,
101
//individualOrganismObservation/simpleUserdefined[name=heightFirstBranch]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,,
102
//individualOrganism/identificationLabel[@id=1],"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2,,
103
//individualOrganism/identificationLabel[@id=2],/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,,,
104
//*s/individualOrganismObservation/relativePlotPosition/relativeX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,,,
105
//*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,,,
106
//*s/individualOrganismObservation/relativePlotPosition/relativeY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,,,
107
//*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,,,
108
//individualOrganismObservation/simpleUserdefined[name=growthForm]/value,/location/locationevent/taxonoccurrence/growthform,,,
109
//individualOrganismObservation/simpleUserdefined[name=sourceAccessionCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
110
//individualOrganismObservation/simpleUserdefined[name=authorPlantCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
111 3830 aaronmk
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,"Brad: Bob, Nick, please is this mapping OK?",DwC,134
112 3831 aaronmk
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,DwC,150
113
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",DwC,153
114
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,DwC,150
115
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,DwC,149
116
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,DwC,147
117
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,DwC,146
118 3830 aaronmk
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Bob, Nick, please is this mapping OK?",DwC,134
119
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,DwC,150
120
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Bob, Nick, please is this mapping OK?",DwC,134
121
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first","Brad: Bob, Nick, please is this mapping OK?",DwC,134
122
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",DwC,153
123
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,DwC,149
124
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,DwC,147
125
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,DwC,146
126
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,DwC,145
127
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,DwC,144
128
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,DwC,143
129
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,DwC,142
130 3831 aaronmk
//individualName/givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,,,
131
//individualName/surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,,,
132
//*s/plotObservation/temperature,/location/locationevent/temperature,,,
133
//geospatial/maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,,
134 3834 aaronmk
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,75
135 3831 aaronmk
//geospatial/minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,,
136 3834 aaronmk
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,74
137 3831 aaronmk
//plot/locationNarrative,/location/locationnarrative,,,
138 3834 aaronmk
locality,/location/locationnarrative/_merge/1,,http://rs.tdwg.org/dwc/terms/,68
139
verbatimLocality,/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",http://rs.tdwg.org/dwc/terms/,69
140
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",http://rs.tdwg.org/dwc/terms/,52
141 3831 aaronmk
//plot/note,/location/notespublic,,,
142
//plot/slopeAspect,/location/slopeaspect/_compass/value,,,
143
//plot/slopeGradient,/location/slopegradient,,,
144 3834 aaronmk
occurrenceID,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
145
institutionCode,/location/sourceaccessioncode/_alt/2/_merge/1,,http://rs.tdwg.org/dwc/terms/,11
146
collectionCode,/location/sourceaccessioncode/_alt/2/_merge/2,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
147
catalogNumber,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
148 3831 aaronmk
//plot/plotUniqueIdentifier,/location/sourceaccessioncode/_merge/1/_alt/1,,,
149
//plot/plotName,/location/sourceaccessioncode/_merge/1/_alt/2,,,
150
//plot/plotUniqueIdentifier,/location/sourceaccessioncode/_merge/2/_alt/1,,,
151
//plot/plotName,/location/sourceaccessioncode/_merge/2/_alt/2,,,
152 3834 aaronmk
acceptedNameUsage,,,http://rs.tdwg.org/dwc/terms/,135
153
acceptedNameUsageID,,,http://rs.tdwg.org/dwc/terms/,128
154
associatedMedia,,,http://rs.tdwg.org/dwc/terms/,36
155
associatedOccurrences,,,http://rs.tdwg.org/dwc/terms/,38
156
associatedReferences,,,http://rs.tdwg.org/dwc/terms/,37
157
associatedSequences,,,http://rs.tdwg.org/dwc/terms/,39
158
associatedTaxa,,,http://rs.tdwg.org/dwc/terms/,40
159
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,http://rs.tdwg.org/dwc/terms/,15
160
bed,,,http://rs.tdwg.org/dwc/terms/,117
161
behavior,,,http://rs.tdwg.org/dwc/terms/,29
162
countryCode,,,http://rs.tdwg.org/dwc/terms/,64
163
dataGeneralizations,,,http://rs.tdwg.org/dwc/terms/,17
164
datasetID,,,http://rs.tdwg.org/dwc/terms/,10
165
datasetName,,,http://rs.tdwg.org/dwc/terms/,13
166
day,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,50
167
dcterms:accessRights,,,http://rs.tdwg.org/dwc/terms/,5
168
dcterms:bibliographicCitation,,,http://rs.tdwg.org/dwc/terms/,6
169
dcterms:language,,,http://rs.tdwg.org/dwc/terms/,2
170
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",http://rs.tdwg.org/dwc/terms/,1
171
dcterms:references,,,http://rs.tdwg.org/dwc/terms/,7
172
dcterms:rights,,,http://rs.tdwg.org/dwc/terms/,3
173
dcterms:rightsHolder,,,http://rs.tdwg.org/dwc/terms/,4
174
dcterms:type,,,http://rs.tdwg.org/dwc/terms/,0
175
disposition,,,http://rs.tdwg.org/dwc/terms/,33
176
dynamicProperties,,,http://rs.tdwg.org/dwc/terms/,18
177
earliestAgeOrLowestStage,,,http://rs.tdwg.org/dwc/terms/,109
178
earliestEonOrLowestEonothem,,,http://rs.tdwg.org/dwc/terms/,101
179
earliestEpochOrLowestSeries,,,http://rs.tdwg.org/dwc/terms/,107
180
earliestEraOrLowestErathem,,,http://rs.tdwg.org/dwc/terms/,103
181
earliestPeriodOrLowestSystem,,,http://rs.tdwg.org/dwc/terms/,105
182
endDayOfYear,,,http://rs.tdwg.org/dwc/terms/,47
183
eventID,,,http://rs.tdwg.org/dwc/terms/,41
184
eventRemarks,,,http://rs.tdwg.org/dwc/terms/,55
185
eventTime,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,45
186
footprintSRS,,,http://rs.tdwg.org/dwc/terms/,92
187
footprintSpatialFit,,,http://rs.tdwg.org/dwc/terms/,93
188
formation,,,http://rs.tdwg.org/dwc/terms/,115
189
geodeticDatum,,,http://rs.tdwg.org/dwc/terms/,87
190
geologicalContextID,,,http://rs.tdwg.org/dwc/terms/,100
191
georeferenceProtocol,,,http://rs.tdwg.org/dwc/terms/,96
192
georeferenceRemarks,,,http://rs.tdwg.org/dwc/terms/,99
193
georeferenceSources,,,http://rs.tdwg.org/dwc/terms/,97
194
georeferenceVerificationStatus,,,http://rs.tdwg.org/dwc/terms/,98
195
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,http://rs.tdwg.org/dwc/terms/,94
196
georeferencedDate,,,http://rs.tdwg.org/dwc/terms/,95
197
group,,,http://rs.tdwg.org/dwc/terms/,114
198
higherClassification,,,http://rs.tdwg.org/dwc/terms/,141
199
higherGeography,,,http://rs.tdwg.org/dwc/terms/,58
200
higherGeographyID,,,http://rs.tdwg.org/dwc/terms/,57
201
highestBiostratigraphicZone,,,http://rs.tdwg.org/dwc/terms/,112
202
identificationID,,,http://rs.tdwg.org/dwc/terms/,118
203
identificationQualifier,,,http://rs.tdwg.org/dwc/terms/,124
204
identificationReferences,,,http://rs.tdwg.org/dwc/terms/,121
205
identificationRemarks,,,http://rs.tdwg.org/dwc/terms/,123
206
identificationVerificationStatus,,,http://rs.tdwg.org/dwc/terms/,122
207
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,http://rs.tdwg.org/dwc/terms/,25
208
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",http://rs.tdwg.org/dwc/terms/,24
209
informationWithheld,,,http://rs.tdwg.org/dwc/terms/,16
210
institutionID,,,http://rs.tdwg.org/dwc/terms/,8
211
island,,,http://rs.tdwg.org/dwc/terms/,62
212
islandGroup,,,http://rs.tdwg.org/dwc/terms/,61
213
latestAgeOrHighestStage,,,http://rs.tdwg.org/dwc/terms/,110
214
latestEonOrHighestEonothem,,,http://rs.tdwg.org/dwc/terms/,102
215
latestEpochOrHighestSeries,,,http://rs.tdwg.org/dwc/terms/,108
216
latestEraOrHighestErathem,,,http://rs.tdwg.org/dwc/terms/,104
217
latestPeriodOrHighestSystem,,,http://rs.tdwg.org/dwc/terms/,106
218
lifeStage,,,http://rs.tdwg.org/dwc/terms/,27
219
lithostratigraphicTerms,,,http://rs.tdwg.org/dwc/terms/,113
220
locationAccordingTo,,,http://rs.tdwg.org/dwc/terms/,78
221
locationID,,,http://rs.tdwg.org/dwc/terms/,56
222
locationRemarks,,,http://rs.tdwg.org/dwc/terms/,79
223
lowestBiostratigraphicZone,,,http://rs.tdwg.org/dwc/terms/,111
224
maximumDistanceAboveSurfaceInMeters,,,http://rs.tdwg.org/dwc/terms/,77
225
measurementAccuracy,,,http://rs.tdwg.org/dwc/terms/,169
226
measurementDeterminedBy,,,http://rs.tdwg.org/dwc/terms/,172
227
measurementDeterminedDate,,,http://rs.tdwg.org/dwc/terms/,171
228
measurementID,,,http://rs.tdwg.org/dwc/terms/,166
229
measurementMethod,,,http://rs.tdwg.org/dwc/terms/,173
230
measurementRemarks,,,http://rs.tdwg.org/dwc/terms/,174
231
measurementType,,,http://rs.tdwg.org/dwc/terms/,167
232
measurementUnit,,,http://rs.tdwg.org/dwc/terms/,170
233
measurementValue,,,http://rs.tdwg.org/dwc/terms/,168
234
member,,,http://rs.tdwg.org/dwc/terms/,116
235
minimumDistanceAboveSurfaceInMeters,,,http://rs.tdwg.org/dwc/terms/,76
236
month,,,http://rs.tdwg.org/dwc/terms/,49
237
municipality,,,http://rs.tdwg.org/dwc/terms/,67
238
nameAccordingTo,,,http://rs.tdwg.org/dwc/terms/,138
239
nameAccordingToID,,,http://rs.tdwg.org/dwc/terms/,131
240
namePublishedIn,,,http://rs.tdwg.org/dwc/terms/,139
241
namePublishedInID,,,http://rs.tdwg.org/dwc/terms/,132
242
namePublishedInYear,,,http://rs.tdwg.org/dwc/terms/,140
243
nomenclaturalCode,,,http://rs.tdwg.org/dwc/terms/,155
244
nomenclaturalStatus,,,http://rs.tdwg.org/dwc/terms/,157
245
occurrenceRemarks,,,http://rs.tdwg.org/dwc/terms/,21
246
occurrenceStatus,,,http://rs.tdwg.org/dwc/terms/,31
247
originalNameUsage,,,http://rs.tdwg.org/dwc/terms/,137
248
originalNameUsageID,,,http://rs.tdwg.org/dwc/terms/,130
249
otherCatalogNumbers,,,http://rs.tdwg.org/dwc/terms/,34
250
ownerInstitutionCode,,,http://rs.tdwg.org/dwc/terms/,14
251
parentNameUsage,,,http://rs.tdwg.org/dwc/terms/,136
252
parentNameUsageID,,,http://rs.tdwg.org/dwc/terms/,129
253
pointRadiusSpatialFit,,,http://rs.tdwg.org/dwc/terms/,90
254
preparations,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,32
255
previousIdentifications,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,35
256
relatedResourceID,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,161
257
relationshipAccordingTo,,,http://rs.tdwg.org/dwc/terms/,163
258
relationshipEstablishedDate,,,http://rs.tdwg.org/dwc/terms/,164
259
relationshipOfResource,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,162
260
relationshipRemarks,,,http://rs.tdwg.org/dwc/terms/,165
261
reproductiveCondition,,,http://rs.tdwg.org/dwc/terms/,28
262
resourceID,,,http://rs.tdwg.org/dwc/terms/,160
263
resourceRelationshipID,,,http://rs.tdwg.org/dwc/terms/,159
264
samplingEffort,,,http://rs.tdwg.org/dwc/terms/,43
265
samplingProtocol,,,http://rs.tdwg.org/dwc/terms/,42
266
scientificNameID,,,http://rs.tdwg.org/dwc/terms/,127
267
startDayOfYear,,,http://rs.tdwg.org/dwc/terms/,46
268
subgenus,,,http://rs.tdwg.org/dwc/terms/,148
269
taxonConceptID,,,http://rs.tdwg.org/dwc/terms/,133
270
taxonID,,,http://rs.tdwg.org/dwc/terms/,126
271
taxonRank,,,http://rs.tdwg.org/dwc/terms/,151
272
taxonomicStatus,,,http://rs.tdwg.org/dwc/terms/,156
273
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,http://rs.tdwg.org/dwc/terms/,125
274
verbatimCoordinateSystem,,,http://rs.tdwg.org/dwc/terms/,83
275
verbatimCoordinates,,,http://rs.tdwg.org/dwc/terms/,80
276
verbatimDepth,,,http://rs.tdwg.org/dwc/terms/,73
277
verbatimElevation,,,http://rs.tdwg.org/dwc/terms/,70
278
verbatimEventDate,,,http://rs.tdwg.org/dwc/terms/,51
279
verbatimSRS,,,http://rs.tdwg.org/dwc/terms/,84
280
verbatimTaxonRank,,,http://rs.tdwg.org/dwc/terms/,152
281
vernacularName,,,http://rs.tdwg.org/dwc/terms/,154
282
waterBody,,,http://rs.tdwg.org/dwc/terms/,60
283
year,,,http://rs.tdwg.org/dwc/terms/,48