|
1
|
VegCSV[DwC],VegBIEN:,Comments,Source,Order
|
|
2
|
//plot/area,/location/area,,,
|
|
3
|
//geospatial/verbatimElevation,/location/elevation/_alt/1,,,
|
|
4
|
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,72
|
|
5
|
//geospatial/maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,,
|
|
6
|
//geospatial/minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,,
|
|
7
|
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
|
|
8
|
//geospatial/minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,,
|
|
9
|
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
|
|
10
|
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/,72
|
|
11
|
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",,http://rs.tdwg.org/dwc/terms/,71
|
|
12
|
//geospatial/maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,,
|
|
13
|
//plot/landform,/location/landform,,,
|
|
14
|
//geospatial/CoordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy,,,
|
|
15
|
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,http://rs.tdwg.org/dwc/terms/,88
|
|
16
|
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,http://rs.tdwg.org/dwc/terms/,89
|
|
17
|
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,,DwC,91
|
|
18
|
//geospatial/DecimalLatitude,/location/locationdetermination/latitude,,,
|
|
19
|
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,85
|
|
20
|
verbatimLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,81
|
|
21
|
//geospatial/DecimalLongitude,/location/locationdetermination/longitude,,,
|
|
22
|
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,86
|
|
23
|
verbatimLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,82
|
|
24
|
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,DwC,66
|
|
25
|
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,DwC,65
|
|
26
|
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,DwC,63
|
|
27
|
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,DwC,59
|
|
28
|
//plotObservation/simpleUserdefined[name=method]/*ID/method/name,/location/locationevent/*_id/method/name,,,
|
|
29
|
//project/title[@id=name],/location/locationevent/*_id/project/projectname,,,
|
|
30
|
//project/title[@id=sourceAccessionCode],/location/locationevent/*_id/project/sourceaccessioncode,,,
|
|
31
|
//plot/plotName,/location/locationevent/authorlocationcode,,,
|
|
32
|
//*s/communityDetermination/*s/communityConcept/commonName,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,,,
|
|
33
|
//*s/communityDetermination/*s/communityConcept/name,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,,,
|
|
34
|
//*s/plotObservation/obsEndDate,/location/locationevent/obsenddate,,,
|
|
35
|
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,,http://rs.tdwg.org/dwc/terms/,44
|
|
36
|
//*s/plotObservation/obsStartDate,/location/locationevent/obsstartdate,,,
|
|
37
|
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,,http://rs.tdwg.org/dwc/terms/,44
|
|
38
|
//plot/plotUniqueIdentifier,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,,,
|
|
39
|
//plot/plotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,,
|
|
40
|
//plot/plotName,/location/locationevent/parent_id/locationevent/authorlocationcode,,,
|
|
41
|
//plot/plotUniqueIdentifier,/location/locationevent/parent_id/locationevent/sourceaccessioncode,,,
|
|
42
|
//plotObservation/simpleUserdefined[name=precipitation]/value,/location/locationevent/precipitation,,,
|
|
43
|
//abioticObservation/simpleUserdefined[name=acidity]/value,/location/locationevent/soilobs/acidity,,,
|
|
44
|
//abioticObservation/simpleUserdefined[name=base]/value,/location/locationevent/soilobs/basesaturation,,,
|
|
45
|
//abioticObservation/simpleUserdefined[name=calcium]/value,/location/locationevent/soilobs/calcium,,,
|
|
46
|
//abioticObservation/simpleUserdefined[name=carbon]/value,/location/locationevent/soilobs/carbon,,,
|
|
47
|
//abioticObservation/simpleUserdefined[name=cationExchangeCapacity]/value,/location/locationevent/soilobs/cationexchangecapacity,,,
|
|
48
|
//abioticObservation/simpleUserdefined[name=clay]/value,/location/locationevent/soilobs/clay,,,
|
|
49
|
//abioticObservation/simpleUserdefined[name=conductivity]/value,/location/locationevent/soilobs/conductivity,,,
|
|
50
|
//*s/abioticObservation/magnesium,/location/locationevent/soilobs/magnesium,,,
|
|
51
|
//*s/abioticObservation/nitrogen,/location/locationevent/soilobs/nitrogen,,,
|
|
52
|
//abioticObservation/simpleUserdefined[name=organic]/value,/location/locationevent/soilobs/organic,,,
|
|
53
|
//*s/abioticObservation/ph,/location/locationevent/soilobs/ph,,,
|
|
54
|
//*s/abioticObservation/phosphorus,/location/locationevent/soilobs/phosphorus,,,
|
|
55
|
//*s/abioticObservation/potassium,/location/locationevent/soilobs/potassium,,,
|
|
56
|
//abioticObservation/simpleUserdefined[name=sand]/value,/location/locationevent/soilobs/sand,,,
|
|
57
|
//abioticObservation/simpleUserdefined[name=silt]/value,/location/locationevent/soilobs/silt,,,
|
|
58
|
//abioticObservation/simpleUserdefined[name=sodium]/value,/location/locationevent/soilobs/sodium,,,
|
|
59
|
//abioticObservation/simpleUserdefined[name=texture]/value,/location/locationevent/soilobs/texture,,,
|
|
60
|
//plot/plotUniqueIdentifier,/location/locationevent/sourceaccessioncode,,,
|
|
61
|
catalogNumber,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
|
|
62
|
collectionCode,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
|
|
63
|
recordNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/1,,http://rs.tdwg.org/dwc/terms/,22
|
|
64
|
collectionID,/location/locationevent/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/,9
|
|
65
|
fieldNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",http://rs.tdwg.org/dwc/terms/,53
|
|
66
|
sex,"/location/locationevent/specimenreplicate/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/,26
|
|
67
|
fieldNotes,/location/locationevent/specimenreplicate/description/_merge/1,,http://rs.tdwg.org/dwc/terms/,54
|
|
68
|
taxonRemarks,/location/locationevent/specimenreplicate/description/_merge/2,,http://rs.tdwg.org/dwc/terms/,158
|
|
69
|
establishmentMeans,"/location/locationevent/specimenreplicate/growthform/_map:[./{tree,shrub,liana,vine,herb,hemiepiphyte,epiphyte,grass,forb,moss,lichen,fungus,""floating aquatic"",""submerged aquatic""}=*,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
|
|
70
|
institutionCode,/location/locationevent/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/,11
|
|
71
|
establishmentMeans,"/location/locationevent/specimenreplicate/iscultivated/_map:[cultivated=t,wild=f,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
|
|
72
|
establishmentMeans,"/location/locationevent/specimenreplicate/isnative/_map:[native=t,exotic=f,*=]/value",,http://rs.tdwg.org/dwc/terms/,30
|
|
73
|
occurrenceID,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
|
|
74
|
dateIdentified,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,http://rs.tdwg.org/dwc/terms/,120
|
|
75
|
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
|
|
76
|
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
|
|
77
|
identifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
|
|
78
|
recordedBy,/location/locationevent/specimenreplicate/verbatimcollectorname,,http://rs.tdwg.org/dwc/terms/,23
|
|
79
|
//*s/taxonDetermination[role=collector]/groupType,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/cond/_eq:[right=direct]/left,,,
|
|
80
|
//taxonNameUsageConcept/voucher,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/else/voucher/*_id/specimenreplicate/catalognumber_dwc,,,
|
|
81
|
//individualOrganismObservation/simpleUserdefined[name=collectionDate]/value,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/else/voucher/*_id/specimenreplicate/collectiondate,,,
|
|
82
|
//taxonNameUsageConcept/voucher,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/then/aggregateoccurrence:[@merge=1]/plantobservation:[@merge=1]/specimenreplicate/catalognumber_dwc,,,
|
|
83
|
//individualOrganismObservation/simpleUserdefined[name=collectionDate]/value,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/then/aggregateoccurrence:[@merge=1]/plantobservation:[@merge=1]/specimenreplicate/collectiondate,,,
|
|
84
|
//*s/aggregateOrganismObservation/*/aggregateValue/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,,,
|
|
85
|
//ordinal/coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,,
|
|
86
|
//individualOrganismObservation/simpleUserdefined[name=censusNo]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
87
|
//*s/individualOrganismObservation/volumeCanopy/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,,,
|
|
88
|
//individualOrganismObservation/simpleUserdefined[name=authorPlantCode]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
|
89
|
//*s/individualOrganismObservation/height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,,
|
|
90
|
//individualOrganismObservation/simpleUserdefined[name=height]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,,
|
|
91
|
//individualOrganismObservation/simpleUserdefined[name=sourceAccessionCode]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
|
92
|
//*s/aggregateOrganismObservation/*/aggregateValue/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,,
|
|
93
|
//individualOrganismObservation/diameterBaseDistance[value=0]/diameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,,,
|
|
94
|
//individualOrganismObservation/simpleUserdefined[name=canopyForm]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
95
|
//individualOrganismObservation/simpleUserdefined[name=canopyPosition]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
96
|
//individualOrganismObservation/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
97
|
//individualOrganismObservation/simpleUserdefined[name=lianaInfestation]/value,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
98
|
//note/text,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,,
|
|
99
|
//individualOrganismObservation/diameterBaseDistance[baseDistance[]/value=1.37]/diameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,,,
|
|
100
|
//individualOrganismObservation/simpleUserdefined[name=height]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,,,
|
|
101
|
//individualOrganismObservation/simpleUserdefined[name=heightFirstBranch]/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,,
|
|
102
|
//individualOrganism/identificationLabel[@id=1],"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2,,
|
|
103
|
//individualOrganism/identificationLabel[@id=2],/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,,,
|
|
104
|
//*s/individualOrganismObservation/relativePlotPosition/relativeX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,,,
|
|
105
|
//*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,,,
|
|
106
|
//*s/individualOrganismObservation/relativePlotPosition/relativeY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,,,
|
|
107
|
//*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,,,
|
|
108
|
//individualOrganismObservation/simpleUserdefined[name=growthForm]/value,/location/locationevent/taxonoccurrence/growthform,,,
|
|
109
|
//individualOrganismObservation/simpleUserdefined[name=sourceAccessionCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
|
110
|
//individualOrganismObservation/simpleUserdefined[name=authorPlantCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
|
111
|
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,"Brad: Bob, Nick, please is this mapping OK?",DwC,134
|
|
112
|
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,DwC,150
|
|
113
|
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",DwC,153
|
|
114
|
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,DwC,150
|
|
115
|
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,DwC,149
|
|
116
|
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,DwC,147
|
|
117
|
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,DwC,146
|
|
118
|
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Bob, Nick, please is this mapping OK?",DwC,134
|
|
119
|
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,DwC,150
|
|
120
|
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Bob, Nick, please is this mapping OK?",DwC,134
|
|
121
|
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first","Brad: Bob, Nick, please is this mapping OK?",DwC,134
|
|
122
|
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",DwC,153
|
|
123
|
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,DwC,149
|
|
124
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,DwC,147
|
|
125
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,DwC,146
|
|
126
|
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,DwC,145
|
|
127
|
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,DwC,144
|
|
128
|
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,DwC,143
|
|
129
|
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,DwC,142
|
|
130
|
//individualName/givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,,,
|
|
131
|
//individualName/surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,,,
|
|
132
|
//*s/plotObservation/temperature,/location/locationevent/temperature,,,
|
|
133
|
//geospatial/maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,,
|
|
134
|
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,75
|
|
135
|
//geospatial/minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,,
|
|
136
|
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/,74
|
|
137
|
//plot/locationNarrative,/location/locationnarrative,,,
|
|
138
|
locality,/location/locationnarrative/_merge/1,,http://rs.tdwg.org/dwc/terms/,68
|
|
139
|
verbatimLocality,/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",http://rs.tdwg.org/dwc/terms/,69
|
|
140
|
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",http://rs.tdwg.org/dwc/terms/,52
|
|
141
|
//plot/note,/location/notespublic,,,
|
|
142
|
//plot/slopeAspect,/location/slopeaspect/_compass/value,,,
|
|
143
|
//plot/slopeGradient,/location/slopegradient,,,
|
|
144
|
occurrenceID,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
|
|
145
|
institutionCode,/location/sourceaccessioncode/_alt/2/_merge/1,,http://rs.tdwg.org/dwc/terms/,11
|
|
146
|
collectionCode,/location/sourceaccessioncode/_alt/2/_merge/2,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
|
|
147
|
catalogNumber,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
|
|
148
|
//plot/plotUniqueIdentifier,/location/sourceaccessioncode/_merge/1/_alt/1,,,
|
|
149
|
//plot/plotName,/location/sourceaccessioncode/_merge/1/_alt/2,,,
|
|
150
|
//plot/plotUniqueIdentifier,/location/sourceaccessioncode/_merge/2/_alt/1,,,
|
|
151
|
//plot/plotName,/location/sourceaccessioncode/_merge/2/_alt/2,,,
|
|
152
|
acceptedNameUsage,,,http://rs.tdwg.org/dwc/terms/,135
|
|
153
|
acceptedNameUsageID,,,http://rs.tdwg.org/dwc/terms/,128
|
|
154
|
associatedMedia,,,http://rs.tdwg.org/dwc/terms/,36
|
|
155
|
associatedOccurrences,,,http://rs.tdwg.org/dwc/terms/,38
|
|
156
|
associatedReferences,,,http://rs.tdwg.org/dwc/terms/,37
|
|
157
|
associatedSequences,,,http://rs.tdwg.org/dwc/terms/,39
|
|
158
|
associatedTaxa,,,http://rs.tdwg.org/dwc/terms/,40
|
|
159
|
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,http://rs.tdwg.org/dwc/terms/,15
|
|
160
|
bed,,,http://rs.tdwg.org/dwc/terms/,117
|
|
161
|
behavior,,,http://rs.tdwg.org/dwc/terms/,29
|
|
162
|
countryCode,,,http://rs.tdwg.org/dwc/terms/,64
|
|
163
|
dataGeneralizations,,,http://rs.tdwg.org/dwc/terms/,17
|
|
164
|
datasetID,,,http://rs.tdwg.org/dwc/terms/,10
|
|
165
|
datasetName,,,http://rs.tdwg.org/dwc/terms/,13
|
|
166
|
day,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,50
|
|
167
|
dcterms:accessRights,,,http://rs.tdwg.org/dwc/terms/,5
|
|
168
|
dcterms:bibliographicCitation,,,http://rs.tdwg.org/dwc/terms/,6
|
|
169
|
dcterms:language,,,http://rs.tdwg.org/dwc/terms/,2
|
|
170
|
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",http://rs.tdwg.org/dwc/terms/,1
|
|
171
|
dcterms:references,,,http://rs.tdwg.org/dwc/terms/,7
|
|
172
|
dcterms:rights,,,http://rs.tdwg.org/dwc/terms/,3
|
|
173
|
dcterms:rightsHolder,,,http://rs.tdwg.org/dwc/terms/,4
|
|
174
|
dcterms:type,,,http://rs.tdwg.org/dwc/terms/,0
|
|
175
|
disposition,,,http://rs.tdwg.org/dwc/terms/,33
|
|
176
|
dynamicProperties,,,http://rs.tdwg.org/dwc/terms/,18
|
|
177
|
earliestAgeOrLowestStage,,,http://rs.tdwg.org/dwc/terms/,109
|
|
178
|
earliestEonOrLowestEonothem,,,http://rs.tdwg.org/dwc/terms/,101
|
|
179
|
earliestEpochOrLowestSeries,,,http://rs.tdwg.org/dwc/terms/,107
|
|
180
|
earliestEraOrLowestErathem,,,http://rs.tdwg.org/dwc/terms/,103
|
|
181
|
earliestPeriodOrLowestSystem,,,http://rs.tdwg.org/dwc/terms/,105
|
|
182
|
endDayOfYear,,,http://rs.tdwg.org/dwc/terms/,47
|
|
183
|
eventID,,,http://rs.tdwg.org/dwc/terms/,41
|
|
184
|
eventRemarks,,,http://rs.tdwg.org/dwc/terms/,55
|
|
185
|
eventTime,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,45
|
|
186
|
footprintSRS,,,http://rs.tdwg.org/dwc/terms/,92
|
|
187
|
footprintSpatialFit,,,http://rs.tdwg.org/dwc/terms/,93
|
|
188
|
formation,,,http://rs.tdwg.org/dwc/terms/,115
|
|
189
|
geodeticDatum,,,http://rs.tdwg.org/dwc/terms/,87
|
|
190
|
geologicalContextID,,,http://rs.tdwg.org/dwc/terms/,100
|
|
191
|
georeferenceProtocol,,,http://rs.tdwg.org/dwc/terms/,96
|
|
192
|
georeferenceRemarks,,,http://rs.tdwg.org/dwc/terms/,99
|
|
193
|
georeferenceSources,,,http://rs.tdwg.org/dwc/terms/,97
|
|
194
|
georeferenceVerificationStatus,,,http://rs.tdwg.org/dwc/terms/,98
|
|
195
|
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,http://rs.tdwg.org/dwc/terms/,94
|
|
196
|
georeferencedDate,,,http://rs.tdwg.org/dwc/terms/,95
|
|
197
|
group,,,http://rs.tdwg.org/dwc/terms/,114
|
|
198
|
higherClassification,,,http://rs.tdwg.org/dwc/terms/,141
|
|
199
|
higherGeography,,,http://rs.tdwg.org/dwc/terms/,58
|
|
200
|
higherGeographyID,,,http://rs.tdwg.org/dwc/terms/,57
|
|
201
|
highestBiostratigraphicZone,,,http://rs.tdwg.org/dwc/terms/,112
|
|
202
|
identificationID,,,http://rs.tdwg.org/dwc/terms/,118
|
|
203
|
identificationQualifier,,,http://rs.tdwg.org/dwc/terms/,124
|
|
204
|
identificationReferences,,,http://rs.tdwg.org/dwc/terms/,121
|
|
205
|
identificationRemarks,,,http://rs.tdwg.org/dwc/terms/,123
|
|
206
|
identificationVerificationStatus,,,http://rs.tdwg.org/dwc/terms/,122
|
|
207
|
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,http://rs.tdwg.org/dwc/terms/,25
|
|
208
|
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",http://rs.tdwg.org/dwc/terms/,24
|
|
209
|
informationWithheld,,,http://rs.tdwg.org/dwc/terms/,16
|
|
210
|
institutionID,,,http://rs.tdwg.org/dwc/terms/,8
|
|
211
|
island,,,http://rs.tdwg.org/dwc/terms/,62
|
|
212
|
islandGroup,,,http://rs.tdwg.org/dwc/terms/,61
|
|
213
|
latestAgeOrHighestStage,,,http://rs.tdwg.org/dwc/terms/,110
|
|
214
|
latestEonOrHighestEonothem,,,http://rs.tdwg.org/dwc/terms/,102
|
|
215
|
latestEpochOrHighestSeries,,,http://rs.tdwg.org/dwc/terms/,108
|
|
216
|
latestEraOrHighestErathem,,,http://rs.tdwg.org/dwc/terms/,104
|
|
217
|
latestPeriodOrHighestSystem,,,http://rs.tdwg.org/dwc/terms/,106
|
|
218
|
lifeStage,,,http://rs.tdwg.org/dwc/terms/,27
|
|
219
|
lithostratigraphicTerms,,,http://rs.tdwg.org/dwc/terms/,113
|
|
220
|
locationAccordingTo,,,http://rs.tdwg.org/dwc/terms/,78
|
|
221
|
locationID,,,http://rs.tdwg.org/dwc/terms/,56
|
|
222
|
locationRemarks,,,http://rs.tdwg.org/dwc/terms/,79
|
|
223
|
lowestBiostratigraphicZone,,,http://rs.tdwg.org/dwc/terms/,111
|
|
224
|
maximumDistanceAboveSurfaceInMeters,,,http://rs.tdwg.org/dwc/terms/,77
|
|
225
|
measurementAccuracy,,,http://rs.tdwg.org/dwc/terms/,169
|
|
226
|
measurementDeterminedBy,,,http://rs.tdwg.org/dwc/terms/,172
|
|
227
|
measurementDeterminedDate,,,http://rs.tdwg.org/dwc/terms/,171
|
|
228
|
measurementID,,,http://rs.tdwg.org/dwc/terms/,166
|
|
229
|
measurementMethod,,,http://rs.tdwg.org/dwc/terms/,173
|
|
230
|
measurementRemarks,,,http://rs.tdwg.org/dwc/terms/,174
|
|
231
|
measurementType,,,http://rs.tdwg.org/dwc/terms/,167
|
|
232
|
measurementUnit,,,http://rs.tdwg.org/dwc/terms/,170
|
|
233
|
measurementValue,,,http://rs.tdwg.org/dwc/terms/,168
|
|
234
|
member,,,http://rs.tdwg.org/dwc/terms/,116
|
|
235
|
minimumDistanceAboveSurfaceInMeters,,,http://rs.tdwg.org/dwc/terms/,76
|
|
236
|
month,,,http://rs.tdwg.org/dwc/terms/,49
|
|
237
|
municipality,,,http://rs.tdwg.org/dwc/terms/,67
|
|
238
|
nameAccordingTo,,,http://rs.tdwg.org/dwc/terms/,138
|
|
239
|
nameAccordingToID,,,http://rs.tdwg.org/dwc/terms/,131
|
|
240
|
namePublishedIn,,,http://rs.tdwg.org/dwc/terms/,139
|
|
241
|
namePublishedInID,,,http://rs.tdwg.org/dwc/terms/,132
|
|
242
|
namePublishedInYear,,,http://rs.tdwg.org/dwc/terms/,140
|
|
243
|
nomenclaturalCode,,,http://rs.tdwg.org/dwc/terms/,155
|
|
244
|
nomenclaturalStatus,,,http://rs.tdwg.org/dwc/terms/,157
|
|
245
|
occurrenceRemarks,,,http://rs.tdwg.org/dwc/terms/,21
|
|
246
|
occurrenceStatus,,,http://rs.tdwg.org/dwc/terms/,31
|
|
247
|
originalNameUsage,,,http://rs.tdwg.org/dwc/terms/,137
|
|
248
|
originalNameUsageID,,,http://rs.tdwg.org/dwc/terms/,130
|
|
249
|
otherCatalogNumbers,,,http://rs.tdwg.org/dwc/terms/,34
|
|
250
|
ownerInstitutionCode,,,http://rs.tdwg.org/dwc/terms/,14
|
|
251
|
parentNameUsage,,,http://rs.tdwg.org/dwc/terms/,136
|
|
252
|
parentNameUsageID,,,http://rs.tdwg.org/dwc/terms/,129
|
|
253
|
pointRadiusSpatialFit,,,http://rs.tdwg.org/dwc/terms/,90
|
|
254
|
preparations,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,32
|
|
255
|
previousIdentifications,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,35
|
|
256
|
relatedResourceID,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,161
|
|
257
|
relationshipAccordingTo,,,http://rs.tdwg.org/dwc/terms/,163
|
|
258
|
relationshipEstablishedDate,,,http://rs.tdwg.org/dwc/terms/,164
|
|
259
|
relationshipOfResource,,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,162
|
|
260
|
relationshipRemarks,,,http://rs.tdwg.org/dwc/terms/,165
|
|
261
|
reproductiveCondition,,,http://rs.tdwg.org/dwc/terms/,28
|
|
262
|
resourceID,,,http://rs.tdwg.org/dwc/terms/,160
|
|
263
|
resourceRelationshipID,,,http://rs.tdwg.org/dwc/terms/,159
|
|
264
|
samplingEffort,,,http://rs.tdwg.org/dwc/terms/,43
|
|
265
|
samplingProtocol,,,http://rs.tdwg.org/dwc/terms/,42
|
|
266
|
scientificNameID,,,http://rs.tdwg.org/dwc/terms/,127
|
|
267
|
startDayOfYear,,,http://rs.tdwg.org/dwc/terms/,46
|
|
268
|
subgenus,,,http://rs.tdwg.org/dwc/terms/,148
|
|
269
|
taxonConceptID,,,http://rs.tdwg.org/dwc/terms/,133
|
|
270
|
taxonID,,,http://rs.tdwg.org/dwc/terms/,126
|
|
271
|
taxonRank,,,http://rs.tdwg.org/dwc/terms/,151
|
|
272
|
taxonomicStatus,,,http://rs.tdwg.org/dwc/terms/,156
|
|
273
|
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,http://rs.tdwg.org/dwc/terms/,125
|
|
274
|
verbatimCoordinateSystem,,,http://rs.tdwg.org/dwc/terms/,83
|
|
275
|
verbatimCoordinates,,,http://rs.tdwg.org/dwc/terms/,80
|
|
276
|
verbatimDepth,,,http://rs.tdwg.org/dwc/terms/,73
|
|
277
|
verbatimElevation,,,http://rs.tdwg.org/dwc/terms/,70
|
|
278
|
verbatimEventDate,,,http://rs.tdwg.org/dwc/terms/,51
|
|
279
|
verbatimSRS,,,http://rs.tdwg.org/dwc/terms/,84
|
|
280
|
verbatimTaxonRank,,,http://rs.tdwg.org/dwc/terms/,152
|
|
281
|
vernacularName,,,http://rs.tdwg.org/dwc/terms/,154
|
|
282
|
waterBody,,,http://rs.tdwg.org/dwc/terms/,60
|
|
283
|
year,,,http://rs.tdwg.org/dwc/terms/,48
|
