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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3701 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Added synchronization of back...
  bin 3924 over 12 years Aaron Marcuse-Kubitza join: Added map_1_core_only option that uses on...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 3950 over 12 years Aaron Marcuse-Kubitza mappings/VegCSV-VegBIEN.specimens.csv: height: ...
  lib 3940 over 12 years Aaron Marcuse-Kubitza xml_func.py: _if(): Changed documentation about...
  mappings 3950 over 12 years Aaron Marcuse-Kubitza mappings/VegCSV-VegBIEN.specimens.csv: height: ...
  schemas 3939 over 12 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 2547 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect the mont...
Makefile 10.1 KB 3764 over 12 years Aaron Marcuse-Kubitza root Makefile, input.Makefile: Maps validation:...
README.TXT 9.03 KB 3845 over 12 years Aaron Marcuse-Kubitza README.TXT: After a new import: Added steps to ...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
3950 08/10/2012 08:35 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: height: Removed mapping to plantobservation.overallheight, since the height is a stem field rather than a plant field. Note that a height in the organisms table will be mapped to the height in a single stemobservation for that plant, with NULL sourceaccessioncode and authorstemcode. Note also that this change is possible because no mapped datasource yet provides a valid overallheight with multiple stems or that differs from its single stem's height. (Although SALVIAS sometimes provides both a stem height and an organism height, that height is always either the same, or the organism height is invalid. See <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS_issues#Some-organisms-have-one-stem-but-different-heights-in-the-organisms-and-stems-tables&gt;.)

3949 08/10/2012 06:56 PM Aaron Marcuse-Kubitza

mappings/DwC2-VegBIEN.specimens.csv: establishmentMeans: Removed obsolete mapping to growthform, since growthforms and cultivated/native information are no longer merged into one field in VegBIEN (which they were when this mapping was created)

3948 08/10/2012 06:18 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: decimalLatitude/decimalLongitude: Added _nullIf suffix for mergability with VegCSV-VegBIEN.specimens.csv

3947 08/10/2012 06:10 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: coordinateUncertaintyInMeters: Added _noCV suffix for mergability with VegCSV-VegBIEN.specimens.csv

3946 08/10/2012 06:00 PM Aaron Marcuse-Kubitza

mappings/DwC2-VegBIEN.specimens.csv: catalogNumber: Added _if wrapper for mergability with VegCSV-VegBIEN.specimens.csv

3945 08/10/2012 05:52 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: catalogNumber direct voucher _if statement: Changed @name to "if indirect voucher", so that it's logical consistent with the else branch following it. It was previously "if direct voucher" because the _if statement only contained a case for direct vouchers, and the else branch was being used in place of a _not() function.

3944 08/10/2012 05:38 PM Aaron Marcuse-Kubitza

mappings/roots: plots roots: Default to using VegCSV instead of VegX for new plots datasources

3943 08/10/2012 05:35 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: catalogNumber _if statements: Changed @names to more descriptive comments. This also prevents the @name from looking confusingly like the condition of the _if statement, which is actually supplied through the cond param and is usually located in a separate mapping.

3942 08/10/2012 05:20 PM Aaron Marcuse-Kubitza

mappings/VegCSV-VegBIEN.specimens.csv: catalogNumber: Split _if apart into separate _ifs for the indirect and direct voucher cases. Moved direct voucher _if inwards so it is just wrapping catalognumber_dwc itself. This will enable this mapping to be used for specimens data, which is always considered a direct voucher and will always have this _if return true. Also moved indirect voucher _if inwards in the same way, so that a future SQL function implementation of _if only needs to concern itself with returning one value or another, not with handling entire XML subtrees. Note that if the indirect voucher _if returns false, NOT NULL and CHECK constraint violations will cause the intervening voucher and specimenreplicate elements to be deleted, thus having the same effect. Use new @name syntax for distinguishing _if statements.

3941 08/10/2012 05:02 PM Aaron Marcuse-Kubitza

mappings: Removed no longer used for_review/VegBIEN-DwC2.specimens.csv

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