1
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VegCSV[DwC],VegBIEN:,Comments
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2
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plotArea,//location/area,
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3
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plotName,//location/authorlocationcode,
|
4
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fieldNumber,//location/authorlocationcode,
|
5
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occurrenceID,//location/authorlocationcode,
|
6
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institutionCode,//location/authorlocationcode,
|
7
|
collectionCode,//location/authorlocationcode,
|
8
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collectionID,//location/authorlocationcode,
|
9
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voucherType,"//location/authorlocationcode/_if[@name=""if indirect voucher""]/cond",
|
10
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catalogNumber,"//location/authorlocationcode/_if[@name=""if indirect voucher""]/else",
|
11
|
verbatimElevation,//location/elevation,
|
12
|
maximumElevationInMeters,//location/elevation,
|
13
|
minimumElevationInMeters,//location/elevation,
|
14
|
minimumElevationInMeters,//location/elevationrange,
|
15
|
maximumElevationInMeters,//location/elevationrange,
|
16
|
minimumElevationInMeters,//location/elevationrange,
|
17
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landform,//location/landform,
|
18
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coordinateUncertaintyInMeters,//locationdetermination/coordsaccuracy,
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19
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coordinatePrecision,//locationdetermination/coordsaccuracy,
|
20
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footprintWKT,//locationdetermination/footprintgeometry_dwc,
|
21
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decimalLatitude,//locationdetermination/latitude,
|
22
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verbatimLatitude,//locationdetermination/latitude,
|
23
|
decimalLongitude,//locationdetermination/longitude,
|
24
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verbatimLongitude,//locationdetermination/longitude,
|
25
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county,//locationdetermination/namedplace_id[rank=county]/placename,
|
26
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stateProvince,//locationdetermination/namedplace_id[rank=stateProvince]/placename,
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27
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country,//locationdetermination/namedplace_id[rank=country]/placename,
|
28
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continent,//locationdetermination/namedplace_id[rank=continent]/placename,
|
29
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samplingProtocol,//method/name,
|
30
|
projectName,//project/projectname,
|
31
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projectID,//project/sourceaccessioncode,
|
32
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fieldNumber,//locationevent/authoreventcode,
|
33
|
communityID,//*/commname,
|
34
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communityName,//commconcept/commdescription,
|
35
|
plotEventEndDate,//locationevent/obsenddate/_*/date,
|
36
|
eventDate,//locationevent/obsenddate/_*/date,
|
37
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dateCollected,//locationevent/obsenddate/_*/date,
|
38
|
plotEventStartDate,//locationevent/obsstartdate/_*/date,
|
39
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eventDate,//locationevent/obsstartdate/_*/date,
|
40
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dateCollected,//locationevent/obsstartdate/_*/date,
|
41
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precipitation,//locationevent/precipitation,
|
42
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acidity,//soilobs/acidity,
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43
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baseSaturation,//soilobs/basesaturation,
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44
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calcium,//soilobs/calcium,
|
45
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carbon,//soilobs/carbon,
|
46
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cationExchangeCapacity,//soilobs/cationexchangecapacity,
|
47
|
clay,//soilobs/clay,
|
48
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conductivity,//soilobs/conductivity,
|
49
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magnesium,//soilobs/magnesium,
|
50
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nitrogen,//soilobs/nitrogen,
|
51
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organic,//soilobs/organic,
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52
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ph,//soilobs/ph,
|
53
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phosphorus,//soilobs/phosphorus,
|
54
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potassium,//soilobs/potassium,
|
55
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sand,//soilobs/sand,
|
56
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silt,//soilobs/silt,
|
57
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sodium,//soilobs/sodium,
|
58
|
texture,//soilobs/texture,
|
59
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dateCollected,//aggregateoccurrence/collectiondate/_*/date,
|
60
|
individualCount,//aggregateoccurrence/count,
|
61
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coverPercent,//aggregateoccurrence/cover,
|
62
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censusNumber,"//aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]/definedvalue",
|
63
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volumeCanopy,//aggregateoccurrence/linecover,
|
64
|
fieldNotes,//aggregateoccurrence/notes,
|
65
|
recordNumber,//plantobservation/collectionnumber,
|
66
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sex,"//plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
|
67
|
individualID,//plantobservation/sourceaccessioncode,
|
68
|
voucherType,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond",
|
69
|
catalogNumber,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
70
|
collectionCode,//specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
|
71
|
collectionID,//specimenreplicate/collectioncode_dwc,
|
72
|
institutionCode,//party/organizationname,
|
73
|
occurrenceID,//specimenreplicate/sourceaccessioncode,
|
74
|
stemCount,//plantobservation/stemcount,
|
75
|
basalDiameter,//stemobservation/basaldiameter,
|
76
|
canopyForm,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
|
77
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canopyPosition,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
|
78
|
diameterBreastHeightGentry,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue",
|
79
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lianaInfestation,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
|
80
|
stemNotes,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue",
|
81
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diameterBreastHeight,//stemobservation/diameterbreastheight,
|
82
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height,//stemobservation/height,
|
83
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heightFirstBranch,//stemobservation/heightfirstbranch,
|
84
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tag,"//stemobservation/stemtag[""""/iscurrent=true]/tag",Quotes sort it before tag2
|
85
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previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag:[../stemtag?[iscurrent=true]/iscurrent=false]/tag,
|
86
|
relativePlotX,//stemobservation/xposition,
|
87
|
relativePlotY,//stemobservation/yposition,
|
88
|
recordNumber,//taxonoccurrence/authortaxoncode,
|
89
|
scientificName,//taxonoccurrence/authortaxoncode,
|
90
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growthForm,//taxonoccurrence/growthform,
|
91
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establishmentMeans,//taxonoccurrence/iscultivated,
|
92
|
establishmentMeans,//taxonoccurrence/isnative,
|
93
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individualID,//taxonoccurrence/sourceaccessioncode,
|
94
|
computer.scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,
|
95
|
computer.taxonRank,//plantconcept/plantname_id[rank=subspecies]/plantname,
|
96
|
computer.infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,
|
97
|
computer.specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,
|
98
|
computer.genus,//plantconcept/plantname_id[rank=genus]/plantname,
|
99
|
computer.family,//plantconcept/plantname_id[rank=family]/plantname,
|
100
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identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/givenname,
|
101
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identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/middlename,
|
102
|
identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/surname,
|
103
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scientificName,//plantconcept/plantname_id[rank=binomial]/plantname,
|
104
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scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,
|
105
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infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,
|
106
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specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,
|
107
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genus,//plantconcept/plantname_id[rank=genus]/plantname,
|
108
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family,//plantconcept/plantname_id[rank=family]/plantname,
|
109
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order,//plantconcept/plantname_id[rank=order]/plantname,
|
110
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class,//plantconcept/plantname_id[rank=class]/plantname,
|
111
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phylum,//plantconcept/plantname_id[rank=subkingdom]/plantname,
|
112
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kingdom,//plantconcept/plantname_id[rank=kingdom]/plantname,
|
113
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dateIdentified,//taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date,
|
114
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taxonRemarks,//taxonoccurrence/taxondetermination[role=identifier]/notes,
|
115
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identificationQualifier,//taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
|
116
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recordedBy,//taxonoccurrence/verbatimcollectorname,
|
117
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recordedBy.givenName,//taxonoccurrence/verbatimcollectorname,
|
118
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recordedBy.surName,//taxonoccurrence/verbatimcollectorname,
|
119
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voucherType,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond",
|
120
|
catalogNumber,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
|
121
|
temperature,//locationevent/temperature,
|
122
|
maximumDepthInMeters,//locationevent/waterdepth,
|
123
|
minimumDepthInMeters,//locationevent/waterdepth,
|
124
|
locality,//location/locationnarrative,
|
125
|
verbatimLocality,//location/locationnarrative,
|
126
|
habitat,"//location/locationnarrative/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
|
127
|
plotNotes,//location/notespublic,
|
128
|
parentPlotName,//location/authorlocationcode,
|
129
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parentLocationID,//location/sourceaccessioncode,
|
130
|
slopeAspect,//location/slopeaspect,
|
131
|
slopeGradient,//location/slopegradient,
|
132
|
locationID,//location/sourceaccessioncode,
|
133
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acceptedNameUsage,,
|
134
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acceptedNameUsageID,,
|
135
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associatedMedia,,
|
136
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associatedOccurrences,,
|
137
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associatedReferences,,
|
138
|
associatedSequences,,
|
139
|
associatedTaxa,,
|
140
|
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
|
141
|
bed,,
|
142
|
behavior,,
|
143
|
countryCode,,
|
144
|
dataGeneralizations,,
|
145
|
datasetID,,
|
146
|
datasetName,,
|
147
|
day,,Brad: OMIT
|
148
|
dcterms:accessRights,,
|
149
|
dcterms:bibliographicCitation,,
|
150
|
dcterms:language,,
|
151
|
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
|
152
|
dcterms:references,,
|
153
|
dcterms:rights,,
|
154
|
dcterms:rightsHolder,,
|
155
|
dcterms:type,,
|
156
|
disposition,,
|
157
|
dynamicProperties,,
|
158
|
earliestAgeOrLowestStage,,
|
159
|
earliestEonOrLowestEonothem,,
|
160
|
earliestEpochOrLowestSeries,,
|
161
|
earliestEraOrLowestErathem,,
|
162
|
earliestPeriodOrLowestSystem,,
|
163
|
endDayOfYear,,
|
164
|
eventID,,
|
165
|
eventRemarks,,
|
166
|
eventTime,,Brad: OMIT
|
167
|
footprintSRS,,
|
168
|
footprintSpatialFit,,
|
169
|
formation,,
|
170
|
geodeticDatum,,
|
171
|
geologicalContextID,,
|
172
|
georeferenceProtocol,,
|
173
|
georeferenceRemarks,,
|
174
|
georeferenceSources,,
|
175
|
georeferenceVerificationStatus,,
|
176
|
georeferencedBy,,
|
177
|
georeferencedDate,,
|
178
|
group,,
|
179
|
higherClassification,,
|
180
|
higherGeography,,
|
181
|
higherGeographyID,,
|
182
|
highestBiostratigraphicZone,,
|
183
|
identificationID,,
|
184
|
identificationReferences,,
|
185
|
identificationRemarks,,
|
186
|
identificationVerificationStatus,,
|
187
|
informationWithheld,,
|
188
|
institutionID,,
|
189
|
island,,
|
190
|
islandGroup,,
|
191
|
latestAgeOrHighestStage,,
|
192
|
latestEonOrHighestEonothem,,
|
193
|
latestEpochOrHighestSeries,,
|
194
|
latestEraOrHighestErathem,,
|
195
|
latestPeriodOrHighestSystem,,
|
196
|
lifeStage,,
|
197
|
lithostratigraphicTerms,,
|
198
|
locationAccordingTo,,
|
199
|
locationRemarks,,
|
200
|
lowestBiostratigraphicZone,,
|
201
|
maximumDistanceAboveSurfaceInMeters,,
|
202
|
measurementAccuracy,,
|
203
|
measurementDeterminedBy,,
|
204
|
measurementDeterminedDate,,
|
205
|
measurementID,,
|
206
|
measurementMethod,,
|
207
|
measurementRemarks,,
|
208
|
measurementType,,
|
209
|
measurementUnit,,
|
210
|
measurementValue,,
|
211
|
member,,
|
212
|
minimumDistanceAboveSurfaceInMeters,,
|
213
|
month,,
|
214
|
municipality,,
|
215
|
nameAccordingTo,,
|
216
|
nameAccordingToID,,
|
217
|
namePublishedIn,,
|
218
|
namePublishedInID,,
|
219
|
namePublishedInYear,,
|
220
|
nomenclaturalCode,,
|
221
|
nomenclaturalStatus,,
|
222
|
occurrenceRemarks,,
|
223
|
occurrenceStatus,,
|
224
|
originalNameUsage,,
|
225
|
originalNameUsageID,,
|
226
|
otherCatalogNumbers,,
|
227
|
ownerInstitutionCode,,
|
228
|
parentNameUsage,,
|
229
|
parentNameUsageID,,
|
230
|
pointRadiusSpatialFit,,
|
231
|
preparations,,Brad: OMIT
|
232
|
previousIdentifications,,Brad: OMIT
|
233
|
relatedResourceID,,Brad: OMIT
|
234
|
relationshipAccordingTo,,
|
235
|
relationshipEstablishedDate,,
|
236
|
relationshipOfResource,,Brad: OMIT
|
237
|
relationshipRemarks,,
|
238
|
reproductiveCondition,,
|
239
|
resourceID,,
|
240
|
resourceRelationshipID,,
|
241
|
samplingEffort,,
|
242
|
scientificNameID,,
|
243
|
startDayOfYear,,
|
244
|
subgenus,,
|
245
|
taxonConceptID,,
|
246
|
taxonID,,
|
247
|
taxonRank,,
|
248
|
taxonomicStatus,,
|
249
|
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
|
250
|
verbatimCoordinateSystem,,
|
251
|
verbatimCoordinates,,
|
252
|
verbatimDepth,,
|
253
|
verbatimEventDate,,
|
254
|
verbatimSRS,,
|
255
|
verbatimTaxonRank,,
|
256
|
vernacularName,,
|
257
|
waterBody,,
|
258
|
year,,
|