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Revision 4268

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/Makefile: Fixed bug where rules needed to generate Veg+.self.csv ($(viaSelfMap)) were still using a pattern match that required a table (`.%.`, `.*.`), even though we are no longer using separate maps for separate tables

View differences:

inputs/MT/specimens/map.full.csv
1 1 
MT[Veg+],Veg+,Comments
2 
basisOfRecord,basisOfRecord
3 2 
collectionCode,collectionCode
4 3 
collectionID,collectionID
5 4 
continent,continent
6 
countryCode,countryCode
7 
datasetName,datasetName
8 5 
establishmentMeans,establishmentMeans
9 6 
family,family
10 7 
genus,genus
11 8 
id,id
12 9 
individualCount,individualCount
13 10 
institutionCode,institutionCode
14 
language,language
15 11 
locality,locality
16 
occurrenceRemarks,occurrenceRemarks
17 
rights,rights
18 
rightsHolder,rightsHolder
19 
type,type
inputs/MT/specimens/VegBIEN.csv
14 14 
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
15 15 
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
16 16 
locality,/location/locationnarrative/_merge/1,
17 
basisOfRecord,,** No join mapping for basisOfRecord **
18 
countryCode,,** No join mapping for countryCode **
19 
datasetName,,** No join mapping for datasetName **
20 
language,,** No join mapping for language **
21 
occurrenceRemarks,,** No join mapping for occurrenceRemarks **
22 
rights,,** No join mapping for rights **
23 
rightsHolder,,** No join mapping for rightsHolder **
24 
type,,** No join mapping for type **
inputs/XAL/specimens/map.full.csv
1 1 
"XAL[Veg+,darwin:]:/content/record/",Veg+,Comments
2 
BasisOfRecord,BasisOfRecord
3 2 
CatalogNumber,CatalogNumber
4 3 
Class,Class
5 4 
CollectionCode,CollectionCode
......
8 7 
CoordinatePrecision,CoordinatePrecision
9 8 
Country,Country
10 9 
County,County
11 
DateLastModified,DateLastModified
12 10 
DayCollected,DayCollected
13 11 
DayIdentified,DayIdentified
14 12 
Family,Family
......
16 14 
IdentifiedBy,IdentifiedBy
17 15 
IndividualCount,IndividualCount
18 16 
InstitutionCode,InstitutionCode
19 
JulianDay,JulianDay
20 17 
Kingdom,Kingdom
21 18 
Latitude,Latitude
22 19 
Locality,Locality
......
30 27 
Notes,Notes
31 28 
Order,Order
32 29 
Phylum,Phylum
33 
PreparationType,PreparationType
34 
PreviousCatalogNumber,PreviousCatalogNumber
35 
RelatedCatalogItem,RelatedCatalogItem
36 
RelationshipType,RelationshipType
37 30 
ScientificName,ScientificName
38 31 
ScientificNameAuthor,ScientificNameAuthor
39 32 
Sex,Sex
40 33 
Species,Species
41 34 
StateProvince,StateProvince
42 35 
Subspecies,Subspecies
43 
TimeOfDay,TimeOfDay
44 
TypeStatus,TypeStatus
45 36 
YearCollected,YearCollected
46 37 
YearIdentified,YearIdentified
47 38 
CollectorNumber,recordNumber/_alt/1,
inputs/XAL/specimens/VegBIEN.csv
55 55 
MaximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
56 56 
MinimumDepth,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
57 57 
Locality,/location/locationnarrative/_merge/1,
58 
BasisOfRecord,,** No join mapping for BasisOfRecord **
59 
DateLastModified,,** No join mapping for DateLastModified **
60 
JulianDay,,** No join mapping for JulianDay **
61 
PreparationType,,** No join mapping for PreparationType **
62 
PreviousCatalogNumber,,** No join mapping for PreviousCatalogNumber **
63 
RelatedCatalogItem,,** No join mapping for RelatedCatalogItem **
64 
RelationshipType,,** No join mapping for RelationshipType **
65 
TimeOfDay,,** No join mapping for TimeOfDay **
66 
TypeStatus,,** No join mapping for TypeStatus **
inputs/NY/specimens/map.full.csv
1 1 
NY[Veg+],Veg+,Comments
2 
BasisOfRecord,BasisOfRecord
3 2 
BoundingBox,BoundingBox
4 3 
CatalogNumber,CatalogNumber
5 4 
Class,Class
......
10 9 
CoordinatePrecision,CoordinatePrecision
11 10 
Country,Country
12 11 
County,County
13 
DateLastModified,DateLastModified
14 12 
DayCollected,DayCollected
15 13 
DayIdentified,DayIdentified
16 14 
Family,Family
......
19 17 
IdentifiedBy,IdentifiedBy
20 18 
IndividualCount,IndividualCount
21 19 
InstitutionCode,InstitutionCode
22 
JulianDay,JulianDay
23 20 
Kingdom,Kingdom
24 21 
Latitude,Latitude
25 22 
Locality,Locality/_merge/1,
......
36 33 
PlantFungusDescription,"Notes/_merge/2/_label[label=""plant fungus""]/value",
37 34 
Order,Order
38 35 
Phylum,Phylum
39 
PreparationType,PreparationType
40 
PreviousCatalogNumber,PreviousCatalogNumber
41 
RelatedCatalogItem,RelatedCatalogItem
42 
RelationshipType,RelationshipType
43 36 
ScientificName,ScientificName
44 37 
ScientificNameAuthor,ScientificNameAuthor
45 38 
Sex,Sex
46 39 
Species,Species
47 40 
StateProvince,StateProvince
48 41 
Subspecies,Subspecies
49 
TimeOfDay,TimeOfDay
50 
TypeStatus,TypeStatus
51 42 
YearCollected,YearCollected
52 43 
YearIdentified,YearIdentified
53 44 
UniqueNYInternalRecordNumber,occurrenceID,
inputs/NY/specimens/VegBIEN.csv
62 62 
Substrate,"/location/locationnarrative/_merge/1/_merge/2/_label[label=""substrate""]/value",
63 63 
Vegetation,"/location/locationnarrative/_merge/1/_merge/3/_label[label=""vegetation""]/value",
64 64 
Habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
65 
BasisOfRecord,,** No join mapping for BasisOfRecord **
66 
DateLastModified,,** No join mapping for DateLastModified **
67 
JulianDay,,** No join mapping for JulianDay **
68 
PreparationType,,** No join mapping for PreparationType **
69 
PreviousCatalogNumber,,** No join mapping for PreviousCatalogNumber **
70 
RelatedCatalogItem,,** No join mapping for RelatedCatalogItem **
71 
RelationshipType,,** No join mapping for RelationshipType **
72 
TimeOfDay,,** No join mapping for TimeOfDay **
73 
TypeStatus,,** No join mapping for TypeStatus **
inputs/ACAD/specimens/map.full.csv
1 1 
ACAD[Veg+],Veg+,Comments
2 
basisOfRecord,basisOfRecord
3 
bibliographicCitation,bibliographicCitation
4 2 
catalogNumber,catalogNumber
5 3 
class,class
6 4 
collectionCode,collectionCode
......
11 9 
dateIdentified,dateIdentified
12 10 
decimalLatitude,decimalLatitude
13 11 
decimalLongitude,decimalLongitude
14 
dynamicProperties,dynamicProperties
15 12 
eventDate,eventDate
16 13 
family,family
17 14 
genus,genus
18 
geodeticDatum,geodeticDatum
19 
georeferenceSources,georeferenceSources
20 
georeferenceVerificationStatus,georeferenceVerificationStatus
21 15 
habitat,habitat
22 16 
id,id
23 
identificationRemarks,identificationRemarks
24 17 
identifiedBy,identifiedBy
25 18 
infraspecificEpithet,infraspecificEpithet
26 19 
institutionCode,institutionCode
27 20 
kingdom,kingdom
28 
language,language
29 21 
locality,locality
30 
locationRemarks,locationRemarks
31 
modified,modified
32 
municipality,municipality
33 
occurrenceRemarks,occurrenceRemarks
34 22 
order,order
35 
ownerInstitutionCode,ownerInstitutionCode
36 23 
phylum,phylum
37 24 
recordNumber,recordNumber
38 25 
recordedBy,recordedBy
39 
reproductiveCondition,reproductiveCondition
40 
rights,rights
41 
rightsHolder,rightsHolder
42 26 
scientificName,scientificName
43 27 
scientificNameAuthorship,scientificNameAuthorship
44 28 
specificEpithet,specificEpithet
45 29 
stateProvince,stateProvince
46 30 
taxonRank,taxonRank
47 
type,type
48 
verbatimDepth,verbatimDepth
49 31 
verbatimElevation,verbatimElevation
inputs/ACAD/specimens/VegBIEN.csv
40 40 
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
41 41 
locality,/location/locationnarrative/_merge/1,
42 42 
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
43 
basisOfRecord,,** No join mapping for basisOfRecord **
44 
bibliographicCitation,,** No join mapping for bibliographicCitation **
45 
dynamicProperties,,** No join mapping for dynamicProperties **
46 
geodeticDatum,,** No join mapping for geodeticDatum **
47 
georeferenceSources,,** No join mapping for georeferenceSources **
48 
georeferenceVerificationStatus,,** No join mapping for georeferenceVerificationStatus **
49 
identificationRemarks,,** No join mapping for identificationRemarks **
50 
language,,** No join mapping for language **
51 
locationRemarks,,** No join mapping for locationRemarks **
52 
modified,,** No join mapping for modified **
53 
municipality,,** No join mapping for municipality **
54 
occurrenceRemarks,,** No join mapping for occurrenceRemarks **
55 
ownerInstitutionCode,,** No join mapping for ownerInstitutionCode **
56 
reproductiveCondition,,** No join mapping for reproductiveCondition **
57 
rights,,** No join mapping for rights **
58 
rightsHolder,,** No join mapping for rightsHolder **
59 
type,,** No join mapping for type **
60 
verbatimDepth,,** No join mapping for verbatimDepth **
inputs/REMIB/specimens/map.full.csv
10 10 
locality,locality
11 11 
coll_month,monthCollected,
12 12 
accession_number,occurrenceID,
13 
preparation,preparation
14 13 
specificEpithet,specificEpithet
15 14 
state,state
16 15 
lat_deg,verbatimLatitude,
inputs/REMIB/specimens/VegBIEN.csv
23 23 
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
24 24 
locality,/location/locationnarrative/_merge/1,
25 25 
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
26 
preparation,,** No join mapping for preparation **
inputs/ARIZ/specimens/map.full.csv
1 1 
ARIZ[Veg+],Veg+,Comments
2 
BasisOfRecord,BasisOfRecord
3 2 
BoundingBox,BoundingBox
4 3 
CatalogNumberNumeric,CatalogNumber/_alt/1,
5 4 
CatalogNumber,CatalogNumber/_alt/2,Don't overwrite CatalogNumberNumeric
......
11 10 
CoordinateUncertaintyInMeters,CoordinateUncertaintyInMeters
12 11 
Country,Country
13 12 
County,County
14 
DateLastModified,DateLastModified
15 13 
DayCollected,DayCollected
16 14 
DayIdentified,DayIdentified
17 15 
DecimalLatitude,DecimalLatitude
......
20 18 
FieldNotes,FieldNotes
21 19 
Genus,Genus
22 20 
GlobalUniqueIdentifier,GlobalUniqueIdentifier
23 
HigherGeography,HigherGeography
24 21 
IdentifiedBy,IdentifiedBy
25 22 
IndividualCount,IndividualCount
26 23 
InstitutionCode,InstitutionCode
27 
Island,Island
28 
IslandGroup,IslandGroup
29 
JulianDay,JulianDay
30 24 
Kingdom,Kingdom
31 25 
Locality,Locality
32 26 
MaximumDepthInMeters,MaximumDepthInMeters
......
37 31 
MonthIdentified,MonthIdentified
38 32 
Order,Order
39 33 
Phylum,Phylum
40 
Preparations,Preparations
41 34 
OtherCatalogNumbers,RelatedCatalogItem/_alt/1,
42 35 
RelatedCatalogedItems,RelatedCatalogItem/_alt/2,Used only when OtherCatalogNumbers is NULL
43 36 
Remarks,Remarks
......
48 41 
StateProvince,StateProvince
49 42 
Subspecies,Subspecies
50 43 
TimeCollected,TimeOfDay,
51 
TypeStatus,TypeStatus
52 
VerbatimDepth,VerbatimDepth
53 44 
VerbatimElevation,VerbatimElevation
54 45 
VerbatimLatitude,VerbatimLatitude
55 46 
VerbatimLongitude,VerbatimLongitude
inputs/ARIZ/specimens/VegBIEN.csv
71 71 
MinimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
72 72 
Locality,/location/locationnarrative/_merge/1,
73 73 
AgeClass,,** No join mapping for lifeStage **
74 
BasisOfRecord,,** No join mapping for BasisOfRecord **
75 
DateLastModified,,** No join mapping for DateLastModified **
76 74 
GenBankNum,,"** No join mapping for associatedSequences/_label[label=""GenBank""]/value ** "
77 75 
GeorefMethod,,** No join mapping for georeferenceProtocol **
78 
HigherGeography,,** No join mapping for HigherGeography **
79 
Island,,** No join mapping for Island **
80 
IslandGroup,,** No join mapping for IslandGroup **
81 
JulianDay,,** No join mapping for JulianDay **
82 76 
LatLongComments,,** No join mapping for georeferenceRemarks **
83 77 
OriginalCoordinateSystem,,** No join mapping for verbatimSRS **
84 78 
OtherCatalogNumbers,,** No join mapping for RelatedCatalogItem/_alt/1 **
85 
Preparations,,** No join mapping for Preparations **
86 79 
RelatedCatalogedItems,,** No join mapping for RelatedCatalogItem/_alt/2 ** Used only when OtherCatalogNumbers is NULL
87 80 
TimeCollected,,** No join mapping for TimeOfDay **
88 
TypeStatus,,** No join mapping for TypeStatus **
89 
VerbatimDepth,,** No join mapping for VerbatimDepth **
inputs/SpeciesLink/specimens/map.full.csv
1 1 
"SpeciesLink[Veg+,dwc_dwcore_,dwc_curatorial_,dwc_geospatial_,http__purl_org_,dwc_terms_,conceptual_darwin_2003_1_0_]",Veg+,Comments
2 
BasisOfRecord,BasisOfRecord
3 2 
BoundingBox,BoundingBox
4 3 
CatalogNumber,CatalogNumber
5 4 
Class,Class
......
11 10 
CoordinatePrecision,CoordinatePrecision
12 11 
Country,Country
13 12 
County,County
14 
DateLastModified,DateLastModified
15 13 
DayCollected,DayCollected
16 14 
DayIdentified,DayIdentified
17 15 
DecimalLatitude,DecimalLatitude
......
42 40 
Notes,Notes
43 41 
Order,Order
44 42 
Phylum,Phylum
45 
PreparationType,PreparationType
46 
PreviousCatalogNumber,PreviousCatalogNumber
47 
RelatedCatalogItem,RelatedCatalogItem
48 
RelationshipType,RelationshipType
49 43 
Remarks,Remarks
50 44 
ScientificName,ScientificName
51 45 
ScientificNameAuthor,ScientificNameAuthor/_alt/1,
......
55 49 
SpecificEpithet,SpecificEpithet
56 50 
StateProvince,StateProvince
57 51 
Subspecies,Subspecies
58 
TimeOfDay,TimeOfDay
59 
TypeStatus,TypeStatus
60 52 
VerbatimLatitude,VerbatimLatitude
61 53 
VerbatimLongitude,VerbatimLongitude
62 54 
YearCollected,YearCollected
63 55 
YearIdentified,YearIdentified
64 
basisOfRecord,basisOfRecord
65 56 
catalogNumber,catalogNumber
66 57 
class,class
67 58 
collectionCode,collectionCode
......
71 62 
country,country
72 63 
county,county
73 64 
dateIdentified,dateIdentified
74 
day,day
75 65 
dc_terms_modified,dcterms:modified,
76 66 
decimalLatitude,decimalLatitude
77 67 
decimalLongitude,decimalLongitude
78 
endDayOfYear,endDayOfYear
79 
eventTime,eventTime
80 68 
family,family
81 69 
genus,genus
82 70 
identifiedBy,identifiedBy
......
89 77 
maximumElevationInMeters,maximumElevationInMeters
90 78 
minimumDepthInMeters,minimumDepthInMeters
91 79 
minimumElevationInMeters,minimumElevationInMeters
92 
month,month
93 
occurrenceRemarks,occurrenceRemarks
94 80 
order,order
95 
otherCatalogNumbers,otherCatalogNumbers
96 81 
phylum,phylum
97 
preparations,preparations
98 82 
recordNumber,recordNumber/_alt/1,
99 83 
FieldNumber,recordNumber/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
100 84 
-----
......
111 95 
scientificNameAuthorship,scientificNameAuthorship
112 96 
sex,sex
113 97 
specificEpithet,specificEpithet
114 
startDayOfYear,startDayOfYear
115 98 
stateProvince,stateProvince
116 
typeStatus,typeStatus
117 99 
verbatimLatitude,verbatimLatitude
118 100 
verbatimLongitude,verbatimLongitude
119 
year,year
inputs/SpeciesLink/specimens/VegBIEN.csv
138 138 
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
139 139 
Locality,/location/locationnarrative/_merge/1,
140 140 
locality,/location/locationnarrative/_merge/1,
141 
BasisOfRecord,,** No join mapping for BasisOfRecord **
142 
DateLastModified,,** No join mapping for DateLastModified **
143 141 
DayOfYear,,** No join mapping for JulianDay/_alt/2 **
144 142 
JulianDay,,** No join mapping for JulianDay/_alt/1 **
145 
PreparationType,,** No join mapping for PreparationType **
146 
PreviousCatalogNumber,,** No join mapping for PreviousCatalogNumber **
147 
RelatedCatalogItem,,** No join mapping for RelatedCatalogItem **
148 
RelationshipType,,** No join mapping for RelationshipType **
149 
TimeOfDay,,** No join mapping for TimeOfDay **
150 
TypeStatus,,** No join mapping for TypeStatus **
151 
basisOfRecord,,** No join mapping for basisOfRecord **
152 
day,,** No join mapping for day **
153 143 
dc_terms_modified,,** No join mapping for dcterms:modified **
154 
endDayOfYear,,** No join mapping for endDayOfYear **
155 
eventTime,,** No join mapping for eventTime **
156 
month,,** No join mapping for month **
157 
occurrenceRemarks,,** No join mapping for occurrenceRemarks **
158 
otherCatalogNumbers,,** No join mapping for otherCatalogNumbers **
159 
preparations,,** No join mapping for preparations **
160 
startDayOfYear,,** No join mapping for startDayOfYear **
161 
typeStatus,,** No join mapping for typeStatus **
162 
year,,** No join mapping for year **
inputs/MO/specimens/map.full.csv
1 1 
MO[Veg+],Veg+,Comments
2 
BasisOfRecord,BasisOfRecord
3 2 
CatalogNumber,CatalogNumber
4 3 
CollectionCode,CollectionCode
5 4 
Collector,Collector
......
7 6 
ContinentOcean,ContinentOcean
8 7 
Country,Country
9 8 
County,County
10 
DateLastModified,DateLastModified
11 9 
DayCollected,DayCollected
12 10 
IdentifiedBy,IdentifiedBy
13 11 
IndividualCount,IndividualCount
......
21 19 
ScientificNameAuthor,ScientificNameAuthor
22 20 
StateProvince,StateProvince
23 21 
Subspecies,Subspecies
24 
TypeStatus,TypeStatus
25 22 
YearCollected,YearCollected
26 23 
family,family
27 24 
genus,genus
inputs/MO/specimens/VegBIEN.csv
44 44 
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
45 45 
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
46 46 
Locality,/location/locationnarrative/_merge/1,
47 
BasisOfRecord,,** No join mapping for BasisOfRecord **
48 
DateLastModified,,** No join mapping for DateLastModified **
49 
TypeStatus,,** No join mapping for TypeStatus **
inputs/QMOR/specimens/map.full.csv
1 1 
QMOR[Veg+],Veg+,Comments
2 
acceptedNameUsage,acceptedNameUsage
3 
basisOfRecord,basisOfRecord
4 
behavior,behavior
5 
bibliographicCitation,bibliographicCitation
6 2 
catalogNumber,catalogNumber
7 3 
class,class
8 4 
collectionCode,collectionCode
......
11 7 
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters
12 8 
country,country
13 9 
county,county
14 
datasetID,datasetID
15 
datasetName,datasetName
16 10 
dateIdentified,dateIdentified
17 11 
decimalLatitude,decimalLatitude
18 12 
decimalLongitude,decimalLongitude
19 13 
eventDate,eventDate
20 
eventRemarks,eventRemarks
21 
eventTime,eventTime
22 14 
family,family
23 15 
footprintWKT,footprintWKT
24 16 
genus,genus
25 
geodeticDatum,geodeticDatum
26 
georeferenceProtocol,georeferenceProtocol
27 
georeferenceRemarks,georeferenceRemarks
28 
georeferenceSources,georeferenceSources
29 
georeferencedBy,georeferencedBy
30 
georeferencedDate,georeferencedDate
31 17 
habitat,habitat
32 18 
id,id
33 19 
identificationQualifier,identificationQualifier
34 
identificationRemarks,identificationRemarks
35 20 
identifiedBy,identifiedBy
36 21 
individualCount,individualCount
37 22 
infraspecificEpithet,infraspecificEpithet
38 23 
institutionCode,institutionCode
39 
institutionID,institutionID
40 24 
kingdom,kingdom
41 
language,language
42 
lifeStage,lifeStage
43 25 
locality,locality
44 
locationRemarks,locationRemarks
45 26 
maximumElevationInMeters,maximumElevationInMeters
46 27 
minimumElevationInMeters,minimumElevationInMeters
47 
modified,modified
48 
municipality,municipality
49 
nomenclaturalCode,nomenclaturalCode
50 
occurrenceRemarks,occurrenceRemarks
51 28 
order,order
52 
ownerInstitutionCode,ownerInstitutionCode
53 29 
phylum,phylum
54 
preparations,preparations
55 30 
recordedBy,recordedBy
56 
rights,rights
57 
rightsHolder,rightsHolder
58 31 
samplingProtocol,samplingProtocol
59 32 
scientificName,scientificName
60 33 
scientificNameAuthorship,scientificNameAuthorship
......
62 35 
specificEpithet,specificEpithet
63 36 
stateProvince,stateProvince
64 37 
taxonRank,taxonRank
65 
type,type
66 
typeStatus,typeStatus
67 
verbatimCoordinateSystem,verbatimCoordinateSystem
68 
verbatimCoordinates,verbatimCoordinates
69 38 
verbatimElevation,verbatimElevation
70 
verbatimEventDate,verbatimEventDate
71 39 
verbatimLatitude,verbatimLatitude
72 40 
verbatimLongitude,verbatimLongitude
73 
verbatimSRS,verbatimSRS
74 
waterBody,waterBody
inputs/QMOR/specimens/VegBIEN.csv
51 51 
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
52 52 
locality,/location/locationnarrative/_merge/1,
53 53 
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
54 
acceptedNameUsage,,** No join mapping for acceptedNameUsage **
55 
basisOfRecord,,** No join mapping for basisOfRecord **
56 
behavior,,** No join mapping for behavior **
57 
bibliographicCitation,,** No join mapping for bibliographicCitation **
58 
datasetID,,** No join mapping for datasetID **
59 
datasetName,,** No join mapping for datasetName **
60 
eventRemarks,,** No join mapping for eventRemarks **
61 
eventTime,,** No join mapping for eventTime **
62 
geodeticDatum,,** No join mapping for geodeticDatum **
63 
georeferenceProtocol,,** No join mapping for georeferenceProtocol **
64 
georeferenceRemarks,,** No join mapping for georeferenceRemarks **
65 
georeferenceSources,,** No join mapping for georeferenceSources **
66 
georeferencedBy,,** No join mapping for georeferencedBy **
67 
georeferencedDate,,** No join mapping for georeferencedDate **
68 
identificationRemarks,,** No join mapping for identificationRemarks **
69 
institutionID,,** No join mapping for institutionID **
70 
language,,** No join mapping for language **
71 
lifeStage,,** No join mapping for lifeStage **
72 
locationRemarks,,** No join mapping for locationRemarks **
73 
modified,,** No join mapping for modified **
74 
municipality,,** No join mapping for municipality **
75 
nomenclaturalCode,,** No join mapping for nomenclaturalCode **
76 
occurrenceRemarks,,** No join mapping for occurrenceRemarks **
77 
ownerInstitutionCode,,** No join mapping for ownerInstitutionCode **
78 
preparations,,** No join mapping for preparations **
79 
rights,,** No join mapping for rights **
80 
rightsHolder,,** No join mapping for rightsHolder **
81 
type,,** No join mapping for type **
82 
typeStatus,,** No join mapping for typeStatus **
83 
verbatimCoordinateSystem,,** No join mapping for verbatimCoordinateSystem **
84 
verbatimCoordinates,,** No join mapping for verbatimCoordinates **
85 
verbatimEventDate,,** No join mapping for verbatimEventDate **
86 
verbatimSRS,,** No join mapping for verbatimSRS **
87 
waterBody,,** No join mapping for waterBody **
mappings/VegCore.self.csv
25 25 
collectionID,collectionID
26 26 
communityID,communityID
27 27 
communityName,communityName
28 
computer.family,computer.family
29 
computer.genus,computer.genus
30 
computer.infraspecificEpithet,computer.infraspecificEpithet
31 
computer.scientificNameAuthorship,computer.scientificNameAuthorship
32 
computer.specificEpithet,computer.specificEpithet
33 
computer.taxonRank,computer.taxonRank
34 28 
conductivity,conductivity
35 29 
continent,continent
36 30 
coordinatePrecision,coordinatePrecision
......
211 205 
stemCount,stemCount
212 206 
stemNotes,stemNotes
213 207 
subgenus,subgenus
208 
subplot,subplot
214 209 
tag,tag
215 210 
taxonConceptID,taxonConceptID
216 211 
taxonID,taxonID
......
220 215 
temperature,temperature
221 216 
texture,texture
222 217 
typeStatus,typeStatus
218 
verbatimClass,verbatimClass
223 219 
verbatimCoordinateSystem,verbatimCoordinateSystem
224 220 
verbatimCoordinates,verbatimCoordinates
225 221 
verbatimDepth,verbatimDepth
226 222 
verbatimElevation,verbatimElevation
227 223 
verbatimEventDate,verbatimEventDate
224 
verbatimFamily,verbatimFamily
225 
verbatimGenus,verbatimGenus
226 
verbatimIdentificationQualifier,verbatimIdentificationQualifier
227 
verbatimInfraspecificEpithet,verbatimInfraspecificEpithet
228 
verbatimKingdom,verbatimKingdom
228 229 
verbatimLatitude,verbatimLatitude
229 230 
verbatimLocality,verbatimLocality
230 231 
verbatimLongitude,verbatimLongitude
232 
verbatimOrder,verbatimOrder
233 
verbatimPhylum,verbatimPhylum
231 234 
verbatimSRS,verbatimSRS
235 
verbatimScientificName,verbatimScientificName
236 
verbatimScientificNameAuthorship,verbatimScientificNameAuthorship
237 
verbatimSpecificEpithet,verbatimSpecificEpithet
232 238 
verbatimTaxonRank,verbatimTaxonRank
233 239 
vernacularName,vernacularName
234 240 
volumeCanopy,volumeCanopy
mappings/Makefile
12 12 
VegX-VegCore.csv
13 13 

  		




  14
  14
  
    
# Via formats


  		




  15
  
  
    
coreMaps := $(wildcard *-VegBIEN.*.csv)


  		




  
  15
  
    
coreMaps := $(wildcard *-VegBIEN.csv)


  		




  16
  16
  
    
filenameVia = $(shell echo '$(1)'|grep --only-matching --extended-regexp\


  		




  17
  17
  
    
'^[a-zA-Z+]+')


  		




  18
  18
  
    
# can't use --ignore-case because in Mac grep, a bug causes it to break [] exprs


  		




  ......




  59
  59
  
    

  		




  60
  60
  
    
selfMaps :=


  		




  61
  61
  
    

  		




  62
  
  
    
viaCoreMap = $(via)-VegBIEN.%.csv


  		




  63
  
  
    
viaSelfMap = $(via).self.%.csv


  		




  
  62
  
    
viaCoreMap = $(via)-VegBIEN.csv


  		




  
  63
  
    
viaSelfMap = $(via).self.csv


  		




  64
  64
  
    
viaCoreMaps = $(wildcard $(subst %,*,$(viaCoreMap)))


  		




  65
  65
  
    

  		




  66
  66
  
    
define selfMapTargets


  		












  

    
      mappings/Veg+.self.csv
    
  





  1
  1
  
    
Veg+,Veg+


  		




  2
  
  
    
AcceptedNameUsage,AcceptedNameUsage


  		




  3
  
  
    
AcceptedNameUsageID,AcceptedNameUsageID


  		




  4
  
  
    
AccessRights,AccessRights


  		




  5
  2
  
    
Acidity,Acidity


  		




  6
  
  
    
AssociatedMedia,AssociatedMedia


  		




  7
  
  
    
AssociatedOccurrences,AssociatedOccurrences


  		




  8
  
  
    
AssociatedReferences,AssociatedReferences


  		




  9
  
  
    
AssociatedSequences,AssociatedSequences


  		




  10
  
  
    
AssociatedTaxa,AssociatedTaxa


  		




  11
  3
  
    
AuthorObsCode,AuthorObsCode


  		




  12
  4
  
    
AuthorPlantCode,AuthorPlantCode


  		




  13
  5
  
    
BasalDiameter,BasalDiameter


  		




  14
  6
  
    
BaseSaturation,BaseSaturation


  		




  15
  
  
    
BasisOfRecord,BasisOfRecord


  		




  16
  
  
    
Bed,Bed


  		




  17
  
  
    
Behavior,Behavior


  		




  18
  
  
    
BibliographicCitation,BibliographicCitation


  		




  19
  7
  
    
BoundingBox,BoundingBox


  		




  20
  8
  
    
Calcium,Calcium


  		




  21
  9
  
    
CanopyForm,CanopyForm


  		




  ......




  35
  23
  
    
CollectorNumber,CollectorNumber


  		




  36
  24
  
    
CommunityID,CommunityID


  		




  37
  25
  
    
CommunityName,CommunityName


  		




  38
  
  
    
Computer.family,Computer.family


  		




  39
  
  
    
Computer.genus,Computer.genus


  		




  40
  
  
    
Computer.infraspecificEpithet,Computer.infraspecificEpithet


  		




  41
  
  
    
Computer.scientificNameAuthorship,Computer.scientificNameAuthorship


  		




  42
  
  
    
Computer.specificEpithet,Computer.specificEpithet


  		




  43
  
  
    
Computer.taxonRank,Computer.taxonRank


  		




  44
  26
  
    
Conductivity,Conductivity


  		




  45
  27
  
    
Continent,Continent


  		




  46
  28
  
    
ContinentOcean,ContinentOcean


  		




  47
  29
  
    
CoordinatePrecision,CoordinatePrecision


  		




  48
  30
  
    
CoordinateUncertaintyInMeters,CoordinateUncertaintyInMeters


  		




  49
  31
  
    
Country,Country


  		




  50
  
  
    
CountryCode,CountryCode


  		




  
  32
  
    
CountryName,CountryName


  		




  51
  33
  
    
County,County


  		




  52
  34
  
    
CoverPercent,CoverPercent


  		




  53
  
  
    
DataGeneralizations,DataGeneralizations


  		




  54
  
  
    
DatasetID,DatasetID


  		




  55
  
  
    
DatasetName,DatasetName


  		




  56
  35
  
    
DateCollected,DateCollected


  		




  57
  36
  
    
DateCollected/_alt,DateCollected/_alt


  		




  58
  37
  
    
DateIdentified,DateIdentified


  		




  59
  38
  
    
DateIdentified/_alt,DateIdentified/_alt


  		




  60
  
  
    
DateLastModified,DateLastModified


  		




  61
  
  
    
Day,Day


  		




  62
  39
  
    
DayCollected,DayCollected


  		




  63
  40
  
    
DayIdentified,DayIdentified


  		




  64
  
  
    
Dcterms:accessRights,Dcterms:accessRights


  		




  65
  
  
    
Dcterms:bibliographicCitation,Dcterms:bibliographicCitation


  		




  66
  
  
    
Dcterms:language,Dcterms:language


  		




  67
  
  
    
Dcterms:modified,Dcterms:modified


  		




  68
  
  
    
Dcterms:references,Dcterms:references


  		




  69
  
  
    
Dcterms:rights,Dcterms:rights


  		




  70
  
  
    
Dcterms:rightsHolder,Dcterms:rightsHolder


  		




  71
  
  
    
Dcterms:type,Dcterms:type


  		




  72
  41
  
    
DecimalLatitude,DecimalLatitude


  		




  73
  42
  
    
DecimalLongitude,DecimalLongitude


  		




  
  43
  
    
DescriptionOfSite,DescriptionOfSite


  		




  74
  44
  
    
DiameterBreastHeight,DiameterBreastHeight


  		




  75
  45
  
    
DiameterBreastHeightGentry,DiameterBreastHeightGentry


  		




  76
  
  
    
Disposition,Disposition


  		




  77
  
  
    
DynamicProperties,DynamicProperties


  		




  78
  
  
    
EarliestAgeOrLowestStage,EarliestAgeOrLowestStage


  		




  79
  
  
    
EarliestEonOrLowestEonothem,EarliestEonOrLowestEonothem


  		




  80
  
  
    
EarliestEpochOrLowestSeries,EarliestEpochOrLowestSeries


  		




  81
  
  
    
EarliestEraOrLowestErathem,EarliestEraOrLowestErathem


  		




  82
  
  
    
EarliestPeriodOrLowestSystem,EarliestPeriodOrLowestSystem


  		




  83
  
  
    
EndDayOfYear,EndDayOfYear


  		




  
  46
  
    
Elevation,Elevation


  		




  84
  47
  
    
EstablishmentMeans,EstablishmentMeans


  		




  85
  48
  
    
EventDate,EventDate


  		




  86
  
  
    
EventID,EventID


  		




  87
  
  
    
EventRemarks,EventRemarks


  		




  88
  
  
    
EventTime,EventTime


  		




  89
  49
  
    
Family,Family


  		




  90
  50
  
    
FieldNotes,FieldNotes


  		




  91
  51
  
    
FieldNumber,FieldNumber


  		




  92
  
  
    
FootprintSRS,FootprintSRS


  		




  93
  
  
    
FootprintSpatialFit,FootprintSpatialFit


  		




  94
  52
  
    
FootprintWKT,FootprintWKT


  		




  95
  
  
    
Formation,Formation


  		




  96
  53
  
    
Genus,Genus


  		




  97
  
  
    
GeodeticDatum,GeodeticDatum


  		




  98
  
  
    
GeologicalContextID,GeologicalContextID


  		




  99
  
  
    
GeoreferenceProtocol,GeoreferenceProtocol


  		




  100
  
  
    
GeoreferenceRemarks,GeoreferenceRemarks


  		




  101
  
  
    
GeoreferenceSources,GeoreferenceSources


  		




  102
  
  
    
GeoreferenceVerificationStatus,GeoreferenceVerificationStatus


  		




  103
  
  
    
GeoreferencedBy,GeoreferencedBy


  		




  104
  
  
    
GeoreferencedDate,GeoreferencedDate


  		




  105
  54
  
    
GlobalUniqueIdentifier,GlobalUniqueIdentifier


  		




  106
  
  
    
Group,Group


  		




  107
  55
  
    
GrowthForm,GrowthForm


  		




  108
  56
  
    
Habit,Habit


  		




  109
  57
  
    
Habitat,Habitat


  		




  110
  58
  
    
Height,Height


  		




  111
  59
  
    
HeightFirstBranch,HeightFirstBranch


  		




  112
  
  
    
HigherClassification,HigherClassification


  		




  113
  
  
    
HigherGeography,HigherGeography


  		




  114
  
  
    
HigherGeographyID,HigherGeographyID


  		




  115
  
  
    
HighestBiostratigraphicZone,HighestBiostratigraphicZone


  		




  116
  60
  
    
Id,Id


  		




  117
  
  
    
IdentificationID,IdentificationID


  		




  118
  61
  
    
IdentificationQualifier,IdentificationQualifier


  		




  119
  
  
    
IdentificationReferences,IdentificationReferences


  		




  120
  
  
    
IdentificationRemarks,IdentificationRemarks


  		




  121
  
  
    
IdentificationVerificationStatus,IdentificationVerificationStatus


  		




  122
  62
  
    
IdentifiedBy,IdentifiedBy


  		




  123
  63
  
    
IdentifiedDate,IdentifiedDate


  		




  124
  64
  
    
IndividualCount,IndividualCount


  		




  125
  65
  
    
IndividualID,IndividualID


  		




  126
  
  
    
InformationWithheld,InformationWithheld


  		




  127
  66
  
    
InfraspecificEpithet,InfraspecificEpithet


  		




  128
  67
  
    
InstitutionCode,InstitutionCode


  		




  129
  
  
    
InstitutionID,InstitutionID


  		




  130
  
  
    
Island,Island


  		




  131
  
  
    
IslandGroup,IslandGroup


  		




  132
  
  
    
JulianDay,JulianDay


  		




  133
  68
  
    
Kingdom,Kingdom


  		




  134
  69
  
    
Landform,Landform


  		




  135
  
  
    
Language,Language


  		




  136
  
  
    
LatestAgeOrHighestStage,LatestAgeOrHighestStage


  		




  137
  
  
    
LatestEonOrHighestEonothem,LatestEonOrHighestEonothem


  		




  138
  
  
    
LatestEpochOrHighestSeries,LatestEpochOrHighestSeries


  		




  139
  
  
    
LatestEraOrHighestErathem,LatestEraOrHighestErathem


  		




  140
  
  
    
LatestPeriodOrHighestSystem,LatestPeriodOrHighestSystem


  		




  141
  70
  
    
Latitude,Latitude


  		




  142
  71
  
    
LianaInfestation,LianaInfestation


  		




  143
  
  
    
LifeStage,LifeStage


  		




  144
  
  
    
LithostratigraphicTerms,LithostratigraphicTerms


  		




  145
  72
  
    
Locality,Locality


  		




  146
  
  
    
LocationAccordingTo,LocationAccordingTo


  		




  147
  73
  
    
LocationID,LocationID


  		




  
  74
  
    
LocationName,LocationName


  		




  148
  75
  
    
LocationNarrative,LocationNarrative


  		




  149
  
  
    
LocationRemarks,LocationRemarks


  		




  150
  76
  
    
Longitude,Longitude


  		




  151
  
  
    
LowestBiostratigraphicZone,LowestBiostratigraphicZone


  		




  152
  77
  
    
Magnesium,Magnesium


  		




  153
  78
  
    
MaximumDepth,MaximumDepth


  		




  154
  79
  
    
MaximumDepthInMeters,MaximumDepthInMeters


  		




  155
  
  
    
MaximumDistanceAboveSurfaceInMeters,MaximumDistanceAboveSurfaceInMeters


  		




  156
  80
  
    
MaximumElevation,MaximumElevation


  		




  157
  81
  
    
MaximumElevationInMeters,MaximumElevationInMeters


  		




  158
  
  
    
MeasurementAccuracy,MeasurementAccuracy


  		




  159
  
  
    
MeasurementDeterminedBy,MeasurementDeterminedBy


  		




  160
  
  
    
MeasurementDeterminedDate,MeasurementDeterminedDate


  		




  161
  
  
    
MeasurementID,MeasurementID


  		




  162
  
  
    
MeasurementMethod,MeasurementMethod


  		




  163
  
  
    
MeasurementRemarks,MeasurementRemarks


  		




  164
  
  
    
MeasurementType,MeasurementType


  		




  165
  
  
    
MeasurementUnit,MeasurementUnit


  		




  166
  
  
    
MeasurementValue,MeasurementValue


  		




  167
  
  
    
Member,Member


  		




  168
  82
  
    
MinimumDepth,MinimumDepth


  		




  169
  83
  
    
MinimumDepthInMeters,MinimumDepthInMeters


  		




  170
  
  
    
MinimumDistanceAboveSurfaceInMeters,MinimumDistanceAboveSurfaceInMeters


  		




  171
  84
  
    
MinimumElevation,MinimumElevation


  		




  172
  85
  
    
MinimumElevationInMeters,MinimumElevationInMeters


  		




  173
  
  
    
Modified,Modified


  		




  174
  
  
    
Month,Month


  		




  175
  86
  
    
MonthCollected,MonthCollected


  		




  176
  87
  
    
MonthIdentified,MonthIdentified


  		




  177
  
  
    
Municipality,Municipality


  		




  178
  
  
    
NameAccordingTo,NameAccordingTo


  		




  179
  
  
    
NameAccordingToID,NameAccordingToID


  		




  180
  
  
    
NamePublishedIn,NamePublishedIn


  		




  181
  
  
    
NamePublishedInID,NamePublishedInID


  		




  182
  
  
    
NamePublishedInYear,NamePublishedInYear


  		




  183
  88
  
    
Nitrogen,Nitrogen


  		




  184
  
  
    
NomenclaturalCode,NomenclaturalCode


  		




  185
  
  
    
NomenclaturalStatus,NomenclaturalStatus


  		




  186
  89
  
    
Notes,Notes


  		




  187
  90
  
    
OccurrenceID,OccurrenceID


  		




  188
  
  
    
OccurrenceRemarks,OccurrenceRemarks


  		




  189
  
  
    
OccurrenceStatus,OccurrenceStatus


  		




  190
  91
  
    
Order,Order


  		




  191
  92
  
    
Organic,Organic


  		




  192
  
  
    
OriginalNameUsage,OriginalNameUsage


  		




  193
  
  
    
OriginalNameUsageID,OriginalNameUsageID


  		




  194
  
  
    
OtherCatalogNumbers,OtherCatalogNumbers


  		




  195
  
  
    
OwnerInstitutionCode,OwnerInstitutionCode


  		




  196
  93
  
    
ParentLocationID,ParentLocationID


  		




  197
  
  
    
ParentNameUsage,ParentNameUsage


  		




  198
  
  
    
ParentNameUsageID,ParentNameUsageID


  		




  199
  94
  
    
ParentPlotID,ParentPlotID


  		




  200
  95
  
    
ParentPlotName,ParentPlotName


  		




  201
  96
  
    
Ph,Ph


  		




  ......




  203
  98
  
    
Phylum,Phylum


  		




  204
  99
  
    
PlotArea,PlotArea


  		




  205
  100
  
    
PlotEventEndDate,PlotEventEndDate


  		




  206
  
  
    
PlotEventID,PlotEventID


  		




  207
  101
  
    
PlotEventStartDate,PlotEventStartDate


  		




  208
  102
  
    
PlotID,PlotID


  		




  209
  103
  
    
PlotName,PlotName


  		




  210
  104
  
    
PlotNotes,PlotNotes


  		




  211
  
  
    
PointRadiusSpatialFit,PointRadiusSpatialFit


  		




  212
  105
  
    
Potassium,Potassium


  		




  213
  106
  
    
Precipitation,Precipitation


  		




  214
  
  
    
Preparation,Preparation


  		




  215
  
  
    
PreparationType,PreparationType


  		




  216
  
  
    
Preparations,Preparations


  		




  217
  
  
    
PreviousCatalogNumber,PreviousCatalogNumber


  		




  218
  
  
    
PreviousIdentifications,PreviousIdentifications


  		




  219
  107
  
    
PreviousTag,PreviousTag


  		




  220
  108
  
    
ProjectID,ProjectID


  		




  221
  109
  
    
ProjectName,ProjectName


  		




  222
  110
  
    
RecordNumber,RecordNumber


  		




  
  111
  
    
RecordNumber/_alt,RecordNumber/_alt


  		




  223
  112
  
    
RecordedBy,RecordedBy


  		




  224
  113
  
    
RecordedBy.givenName,RecordedBy.givenName


  		




  225
  114
  
    
RecordedBy.surName,RecordedBy.surName


  		




  226
  
  
    
References,References


  		




  227
  
  
    
RelatedCatalogItem,RelatedCatalogItem


  		




  228
  
  
    
RelatedResourceID,RelatedResourceID


  		




  229
  
  
    
RelationshipAccordingTo,RelationshipAccordingTo


  		




  230
  
  
    
RelationshipEstablishedDate,RelationshipEstablishedDate


  		




  231
  
  
    
RelationshipOfResource,RelationshipOfResource


  		




  232
  
  
    
RelationshipRemarks,RelationshipRemarks


  		




  233
  
  
    
RelationshipType,RelationshipType


  		




  234
  115
  
    
RelativePlotX,RelativePlotX


  		




  235
  116
  
    
RelativePlotY,RelativePlotY


  		




  236
  117
  
    
Remarks,Remarks


  		




  237
  
  
    
ReproductiveCondition,ReproductiveCondition


  		




  238
  
  
    
ResourceID,ResourceID


  		




  239
  
  
    
ResourceRelationshipID,ResourceRelationshipID


  		




  240
  
  
    
Rights,Rights


  		




  241
  
  
    
RightsHolder,RightsHolder


  		




  242
  
  
    
SamplingEffort,SamplingEffort


  		




  243
  118
  
    
SamplingProtocol,SamplingProtocol


  		




  244
  119
  
    
Sand,Sand


  		




  245
  120
  
    
ScientificName,ScientificName


  		




  246
  121
  
    
ScientificNameAuthor,ScientificNameAuthor


  		




  247
  122
  
    
ScientificNameAuthorship,ScientificNameAuthorship


  		




  248
  
  
    
ScientificNameID,ScientificNameID


  		




  
  123
  
    
ScientificNameAuthorship/_alt,ScientificNameAuthorship/_alt


  		




  249
  124
  
    
Sex,Sex


  		




  
  125
  
    
ShapeOfSite,ShapeOfSite


  		




  250
  126
  
    
Silt,Silt


  		




  
  127
  
    
SizeOfSite,SizeOfSite


  		




  251
  128
  
    
SlopeAspect,SlopeAspect


  		




  252
  129
  
    
SlopeGradient,SlopeGradient


  		




  253
  130
  
    
Sodium,Sodium


  		




  254
  131
  
    
Species,Species


  		




  255
  132
  
    
SpecificEpithet,SpecificEpithet


  		




  256
  
  
    
StartDayOfYear,StartDayOfYear


  		




  257
  133
  
    
State,State


  		




  258
  134
  
    
StateProvince,StateProvince


  		




  259
  135
  
    
StemCount,StemCount


  		




  260
  136
  
    
StemNotes,StemNotes


  		




  261
  
  
    
Subgenus,Subgenus


  		




  
  137
  
    
Subplot,Subplot


  		




  262
  138
  
    
Subspecies,Subspecies


  		




  263
  139
  
    
Tag,Tag


  		




  264
  
  
    
TaxonConceptID,TaxonConceptID


  		




  265
  140
  
    
TaxonFit,TaxonFit


  		




  266
  
  
    
TaxonID,TaxonID


  		




  267
  141
  
    
TaxonRank,TaxonRank


  		




  268
  142
  
    
TaxonRemarks,TaxonRemarks


  		




  269
  
  
    
TaxonomicStatus,TaxonomicStatus


  		




  270
  143
  
    
Temperature,Temperature


  		




  271
  144
  
    
Texture,Texture


  		




  272
  
  
    
TimeOfDay,TimeOfDay


  		




  273
  
  
    
Type,Type


  		




  274
  
  
    
TypeStatus,TypeStatus


  		




  275
  
  
    
VerbatimCoordinateSystem,VerbatimCoordinateSystem


  		




  276
  
  
    
VerbatimCoordinates,VerbatimCoordinates


  		




  277
  
  
    
VerbatimDepth,VerbatimDepth


  		




  
  145
  
    
VerbatimClass,VerbatimClass


  		




  278
  146
  
    
VerbatimElevation,VerbatimElevation


  		




  279
  
  
    
VerbatimEventDate,VerbatimEventDate


  		




  
  147
  
    
VerbatimFamily,VerbatimFamily


  		




  
  148
  
    
VerbatimGenus,VerbatimGenus


  		




  
  149
  
    
VerbatimGrowthForm,VerbatimGrowthForm


  		




  
  150
  
    
VerbatimIdentificationQualifier,VerbatimIdentificationQualifier


  		




  
  151
  
    
VerbatimInfraspecificEpithet,VerbatimInfraspecificEpithet


  		




  
  152
  
    
VerbatimKingdom,VerbatimKingdom


  		




  280
  153
  
    
VerbatimLatitude,VerbatimLatitude


  		




  281
  154
  
    
VerbatimLocality,VerbatimLocality


  		




  282
  155
  
    
VerbatimLongitude,VerbatimLongitude


  		




  283
  
  
    
VerbatimSRS,VerbatimSRS


  		




  284
  
  
    
VerbatimTaxonRank,VerbatimTaxonRank


  		




  285
  
  
    
VernacularName,VernacularName


  		




  
  156
  
    
VerbatimOrder,VerbatimOrder


  		




  
  157
  
    
VerbatimPhylum,VerbatimPhylum


  		




  
  158
  
    
VerbatimScientificName,VerbatimScientificName


  		




  
  159
  
    
VerbatimScientificNameAuthorship,VerbatimScientificNameAuthorship


  		




  
  160
  
    
VerbatimSpecificEpithet,VerbatimSpecificEpithet


  		




  286
  161
  
    
VolumeCanopy,VolumeCanopy


  		




  287
  162
  
    
VoucherType,VoucherType


  		




  288
  
  
    
WaterBody,WaterBody


  		




  289
  
  
    
Year,Year


  		




  290
  163
  
    
YearCollected,YearCollected


  		




  291
  164
  
    
YearIdentified,YearIdentified


  		




  292
  
  
    
acceptedNameUsage,acceptedNameUsage


  		




  293
  
  
    
acceptedNameUsageID,acceptedNameUsageID


  		




  294
  
  
    
accessRights,accessRights


  		




  295
  165
  
    
acidity,acidity


  		




  296
  
  
    
associatedMedia,associatedMedia


  		




  297
  
  
    
associatedOccurrences,associatedOccurrences


  		




  298
  
  
    
associatedReferences,associatedReferences


  		




  299
  
  
    
associatedSequences,associatedSequences


  		




  300
  
  
    
associatedTaxa,associatedTaxa


  		




  301
  166
  
    
authorObsCode,authorObsCode


  		




  302
  167
  
    
authorPlantCode,authorPlantCode


  		




  303
  168
  
    
basalDiameter,basalDiameter


  		




  304
  169
  
    
baseSaturation,baseSaturation


  		




  305
  
  
    
basisOfRecord,basisOfRecord


  		




  306
  
  
    
bed,bed


  		




  307
  
  
    
behavior,behavior


  		




  308
  
  
    
bibliographicCitation,bibliographicCitation


  		




  309
  170
  
    
boundingBox,boundingBox


  		




  310
  171
  
    
calcium,calcium


  		




  311
  172
  
    
canopyForm,canopyForm


  		




  ......




  325
  186
  
    
collectorNumber,collectorNumber


  		




  326
  187
  
    
communityID,communityID


  		




  327
  188
  
    
communityName,communityName


  		




  328
  
  
    
computer.family,computer.family


  		




  329
  
  
    
computer.genus,computer.genus


  		




  330
  
  
    
computer.infraspecificEpithet,computer.infraspecificEpithet


  		




  331
  
  
    
computer.scientificNameAuthorship,computer.scientificNameAuthorship


  		




  332
  
  
    
computer.specificEpithet,computer.specificEpithet


  		




  333
  
  
    
computer.taxonRank,computer.taxonRank


  		




  334
  189
  
    
conductivity,conductivity


  		




  335
  190
  
    
continent,continent


  		




  336
  191
  
    
continentOcean,continentOcean


  		




  337
  192
  
    
coordinatePrecision,coordinatePrecision


  		




  338
  193
  
    
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters


  		




  339
  194
  
    
country,country


  		




  340
  
  
    
countryCode,countryCode


  		




  341
  195
  
    
county,county


  		




  342
  196
  
    
coverPercent,coverPercent


  		




  343
  
  
    
dataGeneralizations,dataGeneralizations


  		




  344
  
  
    
datasetID,datasetID


  		




  345
  
  
    
datasetName,datasetName


  		




  346
  197
  
    
dateCollected,dateCollected


  		




  347
  198
  
    
dateCollected/_alt,dateCollected/_alt


  		




  348
  199
  
    
dateIdentified,dateIdentified


  		




  349
  200
  
    
dateIdentified/_alt,dateIdentified/_alt


  		




  350
  
  
    
dateLastModified,dateLastModified


  		




  351
  
  
    
day,day


  		




  352
  201
  
    
dayCollected,dayCollected


  		




  353
  202
  
    
dayIdentified,dayIdentified


  		




  354
  
  
    
dcterms:accessRights,dcterms:accessRights


  		




  355
  
  
    
dcterms:bibliographicCitation,dcterms:bibliographicCitation


  		




  356
  
  
    
dcterms:language,dcterms:language


  		




  357
  
  
    
dcterms:modified,dcterms:modified


  		




  358
  
  
    
dcterms:references,dcterms:references


  		




  359
  
  
    
dcterms:rights,dcterms:rights


  		




  360
  
  
    
dcterms:rightsHolder,dcterms:rightsHolder


  		




  361
  
  
    
dcterms:type,dcterms:type


  		




  362
  203
  
    
decimalLatitude,decimalLatitude


  		




  363
  204
  
    
decimalLongitude,decimalLongitude


  		




  364
  205
  
    
diameterBreastHeight,diameterBreastHeight


  		




  365
  206
  
    
diameterBreastHeightGentry,diameterBreastHeightGentry


  		




  366
  
  
    
disposition,disposition


  		




  367
  
  
    
dynamicProperties,dynamicProperties


  		




  368
  
  
    
earliestAgeOrLowestStage,earliestAgeOrLowestStage


  		




  369
  
  
    
earliestEonOrLowestEonothem,earliestEonOrLowestEonothem


  		




  370
  
  
    
earliestEpochOrLowestSeries,earliestEpochOrLowestSeries


  		




  371
  
  
    
earliestEraOrLowestErathem,earliestEraOrLowestErathem


  		




  372
  
  
    
earliestPeriodOrLowestSystem,earliestPeriodOrLowestSystem


  		




  373
  
  
    
endDayOfYear,endDayOfYear


  		




  374
  207
  
    
establishmentMeans,establishmentMeans


  		




  375
  208
  
    
eventDate,eventDate


  		




  376
  
  
    
eventID,eventID


  		




  377
  
  
    
eventRemarks,eventRemarks


  		




  378
  
  
    
eventTime,eventTime


  		




  379
  209
  
    
family,family


  		




  380
  210
  
    
fieldNotes,fieldNotes


  		




  381
  211
  
    
fieldNumber,fieldNumber


  		




  382
  
  
    
footprintSRS,footprintSRS


  		




  383
  
  
    
footprintSpatialFit,footprintSpatialFit


  		




  384
  212
  
    
footprintWKT,footprintWKT


  		




  385
  
  
    
formation,formation


  		




  386
  213
  
    
genus,genus


  		




  387
  
  
    
geodeticDatum,geodeticDatum


  		




  388
  
  
    
geologicalContextID,geologicalContextID


  		




  389
  
  
    
georeferenceProtocol,georeferenceProtocol


  		




  390
  
  
    
georeferenceRemarks,georeferenceRemarks


  		




  391
  
  
    
georeferenceSources,georeferenceSources


  		




  392
  
  
    
georeferenceVerificationStatus,georeferenceVerificationStatus


  		




  393
  
  
    
georeferencedBy,georeferencedBy


  		




  394
  
  
    
georeferencedDate,georeferencedDate


  		




  395
  214
  
    
globalUniqueIdentifier,globalUniqueIdentifier


  		




  396
  
  
    
group,group


  		




  397
  215
  
    
growthForm,growthForm


  		




  398
  216
  
    
habit,habit


  		




  399
  217
  
    
habitat,habitat


  		




  400
  218
  
    
height,height


  		




  401
  219
  
    
heightFirstBranch,heightFirstBranch


  		




  402
  
  
    
higherClassification,higherClassification


  		




  403
  
  
    
higherGeography,higherGeography


  		




  404
  
  
    
higherGeographyID,higherGeographyID


  		




  405
  
  
    
highestBiostratigraphicZone,highestBiostratigraphicZone


  		




  406
  220
  
    
id,id


  		




  407
  
  
    
identificationID,identificationID


  		




  408
  221
  
    
identificationQualifier,identificationQualifier


  		




  409
  
  
    
identificationReferences,identificationReferences


  		




  410
  
  
    
identificationRemarks,identificationRemarks


  		




  411
  
  
    
identificationVerificationStatus,identificationVerificationStatus


  		




  412
  222
  
    
identifiedBy,identifiedBy


  		




  413
  223
  
    
identifiedDate,identifiedDate


  		




  414
  224
  
    
individualCount,individualCount


  		




  415
  225
  
    
individualID,individualID


  		




  416
  
  
    
informationWithheld,informationWithheld


  		




  417
  226
  
    
infraspecificEpithet,infraspecificEpithet


  		




  418
  227
  
    
institutionCode,institutionCode


  		




  419
  
  
    
institutionID,institutionID


  		




  420
  
  
    
island,island


  		




  421
  
  
    
islandGroup,islandGroup


  		




  422
  
  
    
julianDay,julianDay


  		




  423
  228
  
    
kingdom,kingdom


  		




  424
  229
  
    
landform,landform


  		




  425
  
  
    
language,language


  		




  426
  
  
    
latestAgeOrHighestStage,latestAgeOrHighestStage


  		




  427
  
  
    
latestEonOrHighestEonothem,latestEonOrHighestEonothem


  		




  428
  
  
    
latestEpochOrHighestSeries,latestEpochOrHighestSeries


  		




  429
  
  
    
latestEraOrHighestErathem,latestEraOrHighestErathem


  		




  430
  
  
    
latestPeriodOrHighestSystem,latestPeriodOrHighestSystem


  		




  431
  230
  
    
latitude,latitude


  		




  432
  231
  
    
lianaInfestation,lianaInfestation


  		




  433
  
  
    
lifeStage,lifeStage


  		




  434
  
  
    
lithostratigraphicTerms,lithostratigraphicTerms


  		




  435
  232
  
    
locality,locality


  		




  436
  
  
    
locationAccordingTo,locationAccordingTo


  		




  437
  233
  
    
locationID,locationID


  		




  438
  234
  
    
locationNarrative,locationNarrative


  		




  439
  
  
    
locationRemarks,locationRemarks


  		




  440
  235
  
    
longitude,longitude


  		




  441
  
  
    
lowestBiostratigraphicZone,lowestBiostratigraphicZone


  		




  442
  236
  
    
magnesium,magnesium


  		




  443
  237
  
    
maximumDepth,maximumDepth


  		




  444
  238
  
    
maximumDepthInMeters,maximumDepthInMeters


  		




  445
  
  
    
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters


  		




  446
  239
  
    
maximumElevation,maximumElevation


  		




  447
  240
  
    
maximumElevationInMeters,maximumElevationInMeters


  		




  448
  
  
    
measurementAccuracy,measurementAccuracy


  		




  449
  
  
    
measurementDeterminedBy,measurementDeterminedBy


  		




  450
  
  
    
measurementDeterminedDate,measurementDeterminedDate


  		




  451
  
  
    
measurementID,measurementID


  		




  452
  
  
    
measurementMethod,measurementMethod


  		




  453
  
  
    
measurementRemarks,measurementRemarks


  		




  454
  
  
    
measurementType,measurementType


  		




  455
  
  
    
measurementUnit,measurementUnit


  		




  456
  
  
    
measurementValue,measurementValue


  		




  457
  
  
    
member,member


  		




  458
  241
  
    
minimumDepth,minimumDepth


  		




  459
  242
  
    
minimumDepthInMeters,minimumDepthInMeters


  		




  460
  
  
    
minimumDistanceAboveSurfaceInMeters,minimumDistanceAboveSurfaceInMeters


  		




  461
  243
  
    
minimumElevation,minimumElevation


  		




  462
  244
  
    
minimumElevationInMeters,minimumElevationInMeters


  		




  463
  
  
    
modified,modified


  		




  464
  
  
    
month,month


  		




  465
  245
  
    
monthCollected,monthCollected


  		




  466
  246
  
    
monthIdentified,monthIdentified


  		




  467
  
  
    
municipality,municipality


  		




  468
  
  
    
nameAccordingTo,nameAccordingTo


  		




  469
  
  
    
nameAccordingToID,nameAccordingToID


  		




  470
  
  
    
namePublishedIn,namePublishedIn


  		




  471
  
  
    
namePublishedInID,namePublishedInID


  		




  472
  
  
    
namePublishedInYear,namePublishedInYear


  		




  473
  247
  
    
nitrogen,nitrogen


  		




  474
  
  
    
nomenclaturalCode,nomenclaturalCode


  		




  475
  
  
    
nomenclaturalStatus,nomenclaturalStatus


  		




  476
  248
  
    
notes,notes


  		




  477
  249
  
    
occurrenceID,occurrenceID


  		




  478
  
  
    
occurrenceRemarks,occurrenceRemarks


  		




  479
  
  
    
occurrenceStatus,occurrenceStatus


  		




  480
  250
  
    
order,order


  		




  481
  251
  
    
organic,organic


  		




  482
  
  
    
originalNameUsage,originalNameUsage


  		




  483
  
  
    
originalNameUsageID,originalNameUsageID


  		




  484
  
  
    
otherCatalogNumbers,otherCatalogNumbers


  		




  485
  
  
    
ownerInstitutionCode,ownerInstitutionCode


  		




  486
  252
  
    
parentLocationID,parentLocationID


  		




  487
  
  
    
parentNameUsage,parentNameUsage


  		




  488
  
  
    
parentNameUsageID,parentNameUsageID


  		




  489
  253
  
    
parentPlotID,parentPlotID


  		




  490
  254
  
    
parentPlotName,parentPlotName


  		




  491
  255
  
    
ph,ph


  		




  ......




  493
  257
  
    
phylum,phylum


  		




  494
  258
  
    
plotArea,plotArea


  		




  495
  259
  
    
plotEventEndDate,plotEventEndDate


  		




  496
  
  
    
plotEventID,plotEventID


  		




  497
  260
  
    
plotEventStartDate,plotEventStartDate


  		




  498
  261
  
    
plotID,plotID


  		




  499
  262
  
    
plotName,plotName


  		




  500
  263
  
    
plotNotes,plotNotes


  		




  501
  
  
    
pointRadiusSpatialFit,pointRadiusSpatialFit


  		




  502
  264
  
    
potassium,potassium


  		




  503
  265
  
    
precipitation,precipitation


  		




  504
  
  
    
preparation,preparation


  		




  505
  
  
    
preparationType,preparationType


  		




  506
  
  
    
preparations,preparations


  		




  507
  
  
    
previousCatalogNumber,previousCatalogNumber


  		




  508
  
  
    
previousIdentifications,previousIdentifications


  		




  509
  266
  
    
previousTag,previousTag


  		




  510
  267
  
    
projectID,projectID


  		




  511
  268
  
    
projectName,projectName


  		




  512
  269
  
    
recordNumber,recordNumber


  		




  
  270
  
    
recordNumber/_alt,recordNumber/_alt


  		




  513
  271
  
    
recordedBy,recordedBy


  		




  514
  272
  
    
recordedBy.givenName,recordedBy.givenName


  		




  515
  273
  
    
recordedBy.surName,recordedBy.surName


  		




  516
  
  
    
references,references


  		




  517
  
  
    
relatedCatalogItem,relatedCatalogItem


  		




  518
  
  
    
relatedResourceID,relatedResourceID


  		




  519
  
  
    
relationshipAccordingTo,relationshipAccordingTo


  		




  520
  
  
    
relationshipEstablishedDate,relationshipEstablishedDate


  		




  521
  
  
    
relationshipOfResource,relationshipOfResource


  		




  522
  
  
    
relationshipRemarks,relationshipRemarks


  		




  523
  
  
    
relationshipType,relationshipType


  		




  524
  274
  
    
relativePlotX,relativePlotX


  		




  525
  275
  
    
relativePlotY,relativePlotY


  		




  526
  276
  
    
remarks,remarks


  		




  527
  
  
    
reproductiveCondition,reproductiveCondition


  		




  528
  
  
    
resourceID,resourceID


  		




  529
  
  
    
resourceRelationshipID,resourceRelationshipID


  		




  530
  
  
    
rights,rights


  		




  531
  
  
    
rightsHolder,rightsHolder


  		




  532
  
  
    
samplingEffort,samplingEffort


  		




  533
  277
  
    
samplingProtocol,samplingProtocol


  		




  534
  278
  
    
sand,sand


  		




  535
  279
  
    
scientificName,scientificName


  		




  536
  280
  
    
scientificNameAuthor,scientificNameAuthor


  		




  537
  281
  
    
scientificNameAuthorship,scientificNameAuthorship


  		




  538
  
  
    
scientificNameID,scientificNameID


  		




  
  282
  
    
scientificNameAuthorship/_alt,scientificNameAuthorship/_alt


  		




  539
  283
  
    
sex,sex


  		




  540
  284
  
    
silt,silt


  		




  541
  285
  
    
slopeAspect,slopeAspect


  		




  ......




  543
  287
  
    
sodium,sodium


  		




  544
  288
  
    
species,species


  		




  545
  289
  
    
specificEpithet,specificEpithet


  		




  546
  
  
    
startDayOfYear,startDayOfYear


  		




  547
  290
  
    
state,state


  		




  548
  291
  
    
stateProvince,stateProvince


  		




  549
  292
  
    
stemCount,stemCount


  		




  550
  293
  
    
stemNotes,stemNotes


  		




  551
  
  
    
subgenus,subgenus


  		




  
  294
  
    
subplot,subplot


  		




  552
  295
  
    
subspecies,subspecies


  		




  553
  296
  
    
tag,tag


  		




  554
  
  
    
taxonConceptID,taxonConceptID


  		




  555
  297
  
    
taxonFit,taxonFit


  		




  556
  
  
    
taxonID,taxonID


  		




  557
  298
  
    
taxonRank,taxonRank


  		




  558
  299
  
    
taxonRemarks,taxonRemarks


  		




  559
  
  
    
taxonomicStatus,taxonomicStatus


  		




  560
  300
  
    
temperature,temperature


  		




  561
  301
  
    
texture,texture


  		




  562
  
  
    
timeOfDay,timeOfDay


  		




  563
  
  
    
type,type


  		




  564
  
  
    
typeStatus,typeStatus


  		




  565
  
  
    
verbatimCoordinateSystem,verbatimCoordinateSystem


  		




  566
  
  
    
verbatimCoordinates,verbatimCoordinates


  		




  567
  
  
    
verbatimDepth,verbatimDepth


  		




  
  302
  
    
verbatimClass,verbatimClass


  		




  568
  303
  
    
verbatimElevation,verbatimElevation


  		




  569
  
  
    
verbatimEventDate,verbatimEventDate


  		




  
  304
  
    
verbatimFamily,verbatimFamily


  		




  
  305
  
    
verbatimGenus,verbatimGenus


  		




  
  306
  
    
verbatimGrowthForm,verbatimGrowthForm


  		




  
  307
  
    
verbatimIdentificationQualifier,verbatimIdentificationQualifier


  		




  
  308
  
    
verbatimInfraspecificEpithet,verbatimInfraspecificEpithet


  		




  
  309
  
    
verbatimKingdom,verbatimKingdom


  		




  570
  310
  
    
verbatimLatitude,verbatimLatitude


  		




  571
  311
  
    
verbatimLocality,verbatimLocality


  		




  572
  312
  
    
verbatimLongitude,verbatimLongitude


  		




  573
  
  
    
verbatimSRS,verbatimSRS


  		




  574
  
  
    
verbatimTaxonRank,verbatimTaxonRank


  		




  575
  
  
    
vernacularName,vernacularName


  		




  
  313
  
    
verbatimOrder,verbatimOrder


  		




  
  314
  
    
verbatimPhylum,verbatimPhylum


  		




  
  315
  
    
verbatimScientificName,verbatimScientificName


  		




  
  316
  
    
verbatimScientificNameAuthorship,verbatimScientificNameAuthorship


  		




  
  317
  
    
verbatimSpecificEpithet,verbatimSpecificEpithet


  		




  576
  318
  
    
volumeCanopy,volumeCanopy


  		




  577
  319
  
    
voucherType,voucherType


  		




  578
  
  
    
waterBody,waterBody


  		




  579
  
  
    
year,year


  		




  580
  320
  
    
yearCollected,yearCollected


  		




  581
  321
  
    
yearIdentified,yearIdentified


  		












Also available in:  Unified diff