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aaronmk
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#!/usr/bin/env python
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# Loads a command's CSV output stream into a PostgreSQL table.
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# The command may be run more than once.
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import csv
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import os.path
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import re
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import subprocess
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import sys
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sys.path.append(os.path.dirname(__file__)+"/../lib")
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import csvs
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import exc
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import opts
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import sql
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import sql_io
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import sql_gen
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import streams
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import strings
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import util
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def main():
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# Usage
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env_names = []
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def usage_err():
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raise SystemExit('Usage: '+opts.env_usage(env_names)+' '+sys.argv[0]
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+' input_cmd [args...]')
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# Parse args
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input_cmd = sys.argv[1:]
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# Get config from env vars
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table = opts.get_env_var('table', None, env_names)
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schema = opts.get_env_var('schema', 'public', env_names)
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has_row_num = opts.env_flag('has_row_num', True, env_names)
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db_config = opts.get_env_vars(sql.db_config_names, None, env_names)
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errors_table_only = opts.env_flag('errors_table_only', False, env_names)
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verbosity = util.cast(float, opts.get_env_var('verbosity', 3, env_names))
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if not ((errors_table_only or input_cmd != []) and table != None
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and 'engine' in db_config):
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usage_err()
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# Connect to DB
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def log(msg, level=1):
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'''Higher level -> more verbose'''
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if level <= verbosity:
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sys.stderr.write(strings.to_raw_str(msg.rstrip('\n')+'\n'))
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db = sql.connect(db_config, log_debug=log)
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table = sql_gen.Table(table, schema)
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log('Creating errors table')
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errors_table = sql_io.errors_table(db, table, if_exists=False)
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if errors_table_only: sql.drop_table(db, errors_table)
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typed_cols = [
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sql_gen.TypedCol('column', 'text', nullable=False),
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sql_gen.TypedCol('value', 'text'),
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sql_gen.TypedCol('error_code', 'character varying(5)',
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nullable=False),
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sql_gen.TypedCol('error', 'text', nullable=False),
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]
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sql.create_table(db, errors_table, typed_cols, has_pkey=False)
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index_cols = ['column', 'value', 'error_code', 'error']
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sql.add_index(db, index_cols, errors_table, unique=True)
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use_copy_from = [True]
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# Loads data into the table using the currently-selected approach.
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def load():
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# Open input stream
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proc = subprocess.Popen(input_cmd, stdout=subprocess.PIPE, bufsize=-1)
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in_ = proc.stdout
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# Get format info
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info = csvs.stream_info(in_, parse_header=True)
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dialect = info.dialect
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if csvs.is_tsv(dialect): use_copy_from[0] = False
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col_names = map(strings.to_unicode, info.header)
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for i, col in enumerate(col_names): # replace empty column names
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if col == '': col_names[i] = 'column_'+str(i)
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# Select schema and escape names
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def esc_name(name): return db.esc_name(name)
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typed_cols = [sql_gen.TypedCol(v, 'text') for v in col_names]
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if has_row_num:
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typed_cols.insert(0, sql_gen.TypedCol('row_num', 'serial',
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nullable=False))
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log('Creating table')
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sql.create_table(db, table, typed_cols, has_pkey=has_row_num,
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col_indexes=False)
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# Remove rows from any failed COPY FROM
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sql.truncate(db, table)
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def load_():
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# Create COPY FROM statement
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if use_copy_from[0]:
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copy_from = ('COPY '+table.to_str(db)+' ('
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+(', '.join(map(esc_name, col_names)))
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+') FROM STDIN DELIMITER '+db.esc_value(dialect.delimiter)
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+' NULL '+db.esc_value(''))
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assert not csvs.is_tsv(dialect)
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copy_from += ' CSV'
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if dialect.quoting != csv.QUOTE_NONE:
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quote_str = db.esc_value(dialect.quotechar)
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copy_from += ' QUOTE '+quote_str
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if dialect.doublequote: copy_from += ' ESCAPE '+quote_str
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copy_from += ';\n'
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# Load the data
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line_in = streams.ProgressInputStream(in_, sys.stderr, n=1000)
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try:
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if use_copy_from[0]:
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log('Using COPY FROM')
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log(copy_from, level=2)
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db.db.cursor().copy_expert(copy_from, line_in)
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else:
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log('Using INSERT')
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cols_ct = len(col_names)+1 # +1 for row_num
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for row in csvs.make_reader(line_in, dialect):
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row = map(strings.to_unicode, row)
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row.insert(0, sql.default) # row_num is autogen
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util.list_set_length(row, cols_ct) # truncate extra cols
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sql.insert(db, table, row, cacheable=False, log_level=5)
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finally:
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line_in.close() # also closes proc.stdout
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proc.wait()
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sql.with_savepoint(db, load_)
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log('Cleaning up table')
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sql_io.cleanup_table(db, table, col_names)
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log('Vacuuming and reanalyzing table')
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sql.vacuum(db, table)
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if not errors_table_only:
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try: load()
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except sql.DatabaseErrors, e:
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if use_copy_from[0]: # first try
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exc.print_ex(e, plain=True)
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use_copy_from[0] = False
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load() # try again with different approach
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else: raise
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main()
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