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Revision 4606

Added by Aaron Marcuse-Kubitza over 12 years ago

inputs/: Generated combined unmapped_terms.csv, new_terms.csv for all inputs

View differences:

inputs/XAL/unmapped_terms.csv
1 
recordNumber/_alt/1
2 
recordNumber/_alt/2
inputs/TEAM/new_terms.csv
1 
1haPlotCode
2 
Collectors
3 
Comments
4 
ConditionCodes
5 
LocationCodes
6 
Method
7 
ObservationDate
8 
ProtocolLeadScientist
9 
ProtocolLeadScientistInstitution
10 
ProtocolVersion
11 
ResponsibleInstitution
12 
SamplingPeriod
13 
SamplingUnitName
14 
SiteName
15 
TreeNumber
16 
X_1haPlot
17 
Y_1haPlot
18 
dbh_new
19 
dbh_new_pom
20 
dbh_pom
21 
max_diam
22 
max_diam_pom
inputs/TEAM/unmapped_terms.csv
1 
""
inputs/NY/new_terms.csv
1 
PlantFungusDescription
2 
Substrate
3 
UniqueNYInternalRecordNumber
4 
Vegetation
5 
key
inputs/NY/unmapped_terms.csv
1 
""
2 
"Locality/_merge/2/_label[label=""substrate""]/value"
3 
"Locality/_merge/3/_label[label=""vegetation""]/value"
4 
"Notes/_merge/2/_label[label=""plant fungus""]/value"
5 
Locality/_merge/1
6 
MinimumElevation/_nullIf:[null=.]/value
7 
Notes/_merge/1
8 
OMIT
inputs/Madidi/unmapped_terms.csv
1 
""
2 
slopeAspect/_alt/1
3 
slopeAspect/_alt/2
inputs/Madidi/new_terms.csv
1 
"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)"
2 
"Carbón Orgánico (WSP S-9,10–%–0.06)"
3 
"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)"
4 
"Materia Orgánica (WSP S-9,10–%–0.1)"
5 
"Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)"
6 
"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)"
7 
"Type Inventory (C, PP, TP)"
8 
Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05)
9 
Altitude
10 
Arcilla (DIN 18 123–%–1)
11 
Area
12 
Arena (DIN 18 123–%–2.5)
13 
Autor (revised)
14 
Basal area
15 
Bole height
16 
CIC (ISRIC 11–cmolc/Kg–0.05)
17 
Circumference
18 
Collaborators
19 
Common name
20 
Conductividad electrica (ASPT 6–µS/cm– 1 - 10000)
21 
Coordinates
22 
Crown position
23 
Crown shape
24 
Determined by
25 
Diameter
26 
Direction
27 
Expedition
28 
Expedition name
29 
Expedition number
30 
Expedition specimen
31 
Family (revised)
32 
Field family
33 
Field name
34 
First evaluation
35 
Fósforo disponible (ISRIC 14-2–mg/Kg–1.5)
36 
Genera
37 
Index collector
38 
Installed and evaluated by
39 
Inventory code
40 
Inventory name
41 
Inventory number
42 
Latitude (DMS)
43 
Liana presence
44 
Limo (DIN 18 123–%–1)
45 
Locality description
46 
Longitude (DMS)
47 
Minimum altitude
48 
Nitrógeno total (ISRIC 6–%–0.0014)
49 
Number of inventory (expedition)
50 
Number of inventory (general)
51 
Number of stems
52 
Number of subplot
53 
Number of trees
54 
Observaciones
55 
Observations
56 
Orientación/exposicion
57 
Phenology
58 
Plot X
59 
Plot Y
60 
Plot specimen
61 
Project specimen
62 
Qualifier
63 
Related Epilocs
64 
Similar specimen
65 
Slope
66 
Soil sample
67 
Specie+autor
68 
Species and morphotypes
69 
Specimen
70 
Tag number
71 
Textural class
72 
Topographical situation
73 
Total height
74 
Tree number
75 
Trunk
76 
Vegetation type
77 
pH acuoso (ISRIC 4–– 1 - 14)
inputs/UNCC/new_terms.csv
1 
SciName
2 
accession
3 
authors
4 
campus
5 
collday
6 
collectno
7 
collector1
8 
collector2
9 
collector3
10 
collmonth
11 
collyear
12 
comment1
13 
comment2
14 
comment3
15 
comment4
16 
filler
17 
flower
18 
fruit
19 
herbarium
20 
infraname
21 
infrarank
22 
inorout
23 
leaves
24 
loanto
25 
root
26 
sheetno
27 
usdaRank
inputs/UNCC/unmapped_terms.csv
1 
""
2 
"fieldNotes/_merge/5/_label[label=""campus""]/value"
3 
"fieldNotes/_merge/6/_label[label=""loaned to""]/value"
4 
"fieldNotes/_merge/7/_label[label=""in or out""]/value"
5 
"reproductiveCondition/_map:[A=*,I=*,M=*]/value"
6 
Collector/_merge/1
7 
Collector/_merge/2
8 
Collector/_merge/3
9 
Collector/_merge/4
10 
associatedMedia
11 
fieldNotes/_merge/1
12 
fieldNotes/_merge/2
13 
fieldNotes/_merge/3
14 
fieldNotes/_merge/4
15 
taxonRank/_alt/1
16 
taxonRank/_alt/2
inputs/SALVIAS-CSV/unmapped_terms.csv
1 
""
2 
"acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value"
3 
"baseSaturation/_units:[default=""%"",to=]/value"
4 
"calcium/_units:[default=""%"",to=]/value"
5 
"carbon/_units:[default=""%"",to=]/value"
6 
"clay/_units:[default=""%"",to=]/value"
7 
"magnesium/_units:[default=""%"",to=]/value"
8 
"nitrogen/_units:[default=""%"",to=]/value"
9 
"organic/_units:[default=""%"",to=]/value"
10 
"phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value"
11 
"potassium/_units:[default=""%"",to=]/value"
12 
"sand/_units:[default=""%"",to=]/value"
13 
"silt/_units:[default=""%"",to=]/value"
14 
"sodium/_units:[default=""%"",to=]/value"
15 
catalogNumber/_alt/1
16 
catalogNumber/_alt/2
17 
height/_alt/1
18 
height/_alt/2
19 
previousTag/_alt/1
20 
previousTag/_alt/2
21 
tag/_alt/1
22 
tag/_alt/2
inputs/SALVIAS-CSV/new_terms.csv
1 
OBSERVATION_ID
2 
basal_diam
3 
census_date
4 
census_no
5 
cf_aff
6 
clay_percent
7 
coll_firstname
8 
coll_lastname
9 
coll_number
10 
collector_code
11 
comments
12 
date_finish
13 
date_start
14 
det_type
15 
elev_m
16 
elev_max_m
17 
elev_min_m
18 
fam_status
19 
gen_status
20 
height_m
21 
holdridge_life_zone
22 
ht_first_branch_m
23 
ind_id
24 
individual_code
25 
infra_ep_1
26 
infra_rank_1
27 
intercept_cm
28 
lat_decimal
29 
life_zone_code
30 
locality_description
31 
long_decimal
32 
major_geo
33 
no_of_individuals
34 
observation_type
35 
organic_percent
36 
orig_family
37 
orig_species
38 
plot_area_ha
39 
plot_code
40 
plot_methodology
41 
pol1
42 
pol2
43 
precip_mm
44 
project
45 
recensused
46 
sand_percent
47 
silt_percent
48 
soil_C
49 
soil_Ca
50 
soil_K
51 
soil_Mg
52 
soil_N
53 
soil_Na
54 
soil_P
55 
soil_acidity
56 
soil_base
57 
soil_cation_cap
58 
soil_conductivity
59 
soil_texture
60 
species_status
61 
specific_authority
62 
stem_canopy_form
63 
stem_canopy_position
64 
stem_dbh
65 
stem_height_first_branch_m
66 
stem_height_m
67 
stem_liana_infestation
68 
stem_tag1
69 
stem_tag2
70 
tag1
71 
tag2
72 
temp_c
73 
voucher_string
74 
x_position
75 
y_position
inputs/CVS/unmapped_terms.csv
1 
""
2 
OMIT
inputs/CVS/new_terms.csv
1 
%cover
2 
confidentialityStatus
3 
currentTaxonName sec Weakley 2006
4 
locationAccuracy-m
5 
obsStartDate
6 
publicLatitude
7 
publicLongitude
8 
realLatitude
9 
realLongitude
inputs/REMIB/new_terms.csv
1 
accession_number
2 
acronym
3 
coll_day
4 
coll_month
5 
coll_year
6 
lat_deg
7 
lat_min
8 
lat_sec
9 
long_deg
10 
long_min
11 
long_sec
inputs/REMIB/unmapped_terms.csv
1 
""
inputs/CTFS/new_terms.csv
1 
CountryID
2 
Description
3 
DimX
4 
DimY
5 
ExactDate
6 
FamilyID
7 
FieldFamily
8 
GenusAuthority
9 
GenusID
10 
GenusReferenceID
11 
HOM
12 
IDLevel
13 
InfraSpecificLevel
14 
MeasureID
15 
PrimaryStem
16 
ReferenceID
17 
ReferenceX
18 
ReferenceY
19 
SpeciesAuthority
20 
SpeciesCurrentTaxonFlag
21 
SpeciesID
22 
SpeciesMnemonic
23 
SpeciesObsoleteTaxonFlag
24 
SpeciesReferenceID
25 
StemDescription
26 
SubSpeciesAuthority
27 
SubSpeciesCurrentTaxonFlag
28 
SubSpeciesID
29 
SubSpeciesMnemonic
30 
SubSpeciesObsoleteTaxonFlag
31 
TreeID
32 
row_num
33 
x
34 
y
inputs/CTFS/unmapped_terms.csv
1 
""
2 
OMIT
inputs/FIA/unmapped_terms.csv
1 
""
inputs/FIA/new_terms.csv
1 
HOM
2 
MeasDay
3 
MeasMon
4 
MeasYear
5 
PlotCD
6 
TreeTag
inputs/SALVIAS/new_terms.csv
1 
AccessCode
2 
DetType
3 
Elev
4 
ElevSource
5 
GenAuth
6 
Ind
7 
IsMorpho
8 
LatDec
9 
Line
10 
Locality_Description
11 
LongDec
12 
MajorGeo
13 
MethodCode
14 
NoInd
15 
OrigAuth
16 
OrigFamily
17 
OrigGenus
18 
OrigRecordID
19 
OrigSpecies
20 
PlotCode
21 
PlotMethod
22 
PlotObsID
23 
PolDiv1
24 
Precip
25 
PrecipSource
26 
PrimOwnerID
27 
RevisionComments
28 
SiteCode
29 
SiteName
30 
SourceVoucher
31 
SpAuthStatus
32 
Temp
33 
TempSource
34 
allow_download_all
35 
auth
36 
basal_diam
37 
bearing
38 
census_date
39 
census_no
40 
cfaff
41 
clay_percent
42 
coll_firstname
43 
coll_inits
44 
coll_lastname
45 
coll_number
46 
collector_code
47 
common_name
48 
date_finish
49 
date_start
50 
det_by
51 
dist
52 
elev_max_m
53 
elev_min_m
54 
fam_status
55 
gen_status
56 
gentry_dbh
57 
height_class
58 
height_m
59 
height_m_commercial
60 
ht_first_branch_m
61 
ind_id
62 
infra_auth_1
63 
infra_ep_1
64 
infra_rank_1
65 
intercept_cm
66 
ipr_specific
67 
ipr_specific_updated
68 
lat_long_accuracy
69 
lat_string
70 
life_zone
71 
life_zone_code
72 
long_string
73 
morphocf
74 
morphoname
75 
name_status
76 
new_world
77 
on_project_list_index
78 
organic_percent
79 
orig_filename
80 
origrecord_id_stems
81 
other_annotations
82 
perp_dist
83 
phenology
84 
plot_administrator
85 
plot_area_ha
86 
pol1_type
87 
pol2
88 
pol2_type
89 
project_distinct_index
90 
project_name_index
91 
project_pi
92 
recensused
93 
sand_percent
94 
silt_percent
95 
soil_C
96 
soil_Ca
97 
soil_K
98 
soil_Mg
99 
soil_N
100 
soil_Na
101 
soil_P
102 
soil_acidity
103 
soil_base
104 
soil_cation_cap
105 
soil_conductivity
106 
soil_texture
107 
species_code
108 
stem_canopy_form
109 
stem_canopy_position
110 
stem_dbh
111 
stem_height_first_branch_m
112 
stem_height_m
113 
stem_liana_infestation
114 
stem_tag1
115 
stem_tag2
116 
tag1
117 
tag2
118 
temp_dbh
119 
temp_liandbh
120 
tmp_del
121 
topography_desc
122 
vegetation_1
123 
vegetation_2
124 
x_position
125 
y_position
inputs/SALVIAS/unmapped_terms.csv
1 
""
2 
"acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value"
3 
"baseSaturation/_units:[default=""%"",to=]/value"
4 
"calcium/_units:[default=""%"",to=]/value"
5 
"carbon/_units:[default=""%"",to=]/value"
6 
"clay/_units:[default=""%"",to=]/value"
7 
"magnesium/_units:[default=""%"",to=]/value"
8 
"nitrogen/_units:[default=""%"",to=]/value"
9 
"organic/_units:[default=""%"",to=]/value"
10 
"phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value"
11 
"potassium/_units:[default=""%"",to=]/value"
12 
"sand/_units:[default=""%"",to=]/value"
13 
"silt/_units:[default=""%"",to=]/value"
14 
"sodium/_units:[default=""%"",to=]/value"
15 
"texture/_units:[default=""%"",to=]/value"
16 
catalogNumber/_alt/1
17 
catalogNumber/_alt/2
inputs/U/new_terms.csv
1 
Addcoll
2 
Alt
3 
Alt2
4 
Barcode
5 
Colldd
6 
Collmm
7 
Collyy
8 
Coorsyst
9 
DateInfo
10 
Detby
11 
Detyy
12 
EW
13 
Ecology
14 
Gazetteer
15 
Lat
16 
Locnotes
17 
Long
18 
Majorarea
19 
NS
20 
Newgazett
21 
Number
22 
Phenology
23 
Prefix
24 
Suffix
25 
cf
inputs/U/unmapped_terms.csv
1 
""
2 
"VerbatimLocality/_merge/1/_label[label=""gazetteer""]/value/_merge/1"
3 
"VerbatimLocality/_merge/1/_label[label=""gazetteer""]/value/_merge/2"
4 
Collector/_merge/1
5 
Collector/_merge/2
6 
ReproductiveCondition
7 
VerbatimLocality/_merge/2
inputs/ARIZ/unmapped_terms.csv
1 
""
2 
"associatedSequences/_label[label=""GenBank""]/value"
3 
CatalogNumber/_alt/1
4 
CatalogNumber/_alt/2
5 
OMIT
6 
RelatedCatalogItem/_alt/1
7 
RelatedCatalogItem/_alt/2
8 
ScientificName/_alt/1
9 
ScientificName/_alt/2
10 
dateCollected/_alt/0
11 
eventTime
12 
georeferenceProtocol
13 
georeferenceRemarks
14 
lifeStage
15 
verbatimSRS
inputs/ARIZ/new_terms.csv
1 
AgeClass
2 
CatalogNumberNumeric
3 
GenBankNum
4 
GeorefMethod
5 
HorizontalDatum
6 
IdentificationModifier
7 
LatLongComments
8 
OriginalCoordinateSystem
9 
OtherCatalogNumbers
10 
RelatedCatalogedItems
11 
TimeCollected
12 
Tissues
13 
VerbatimCollectingDate
inputs/GBIF/new_terms.csv
1 
AuthorOfScientificName
2 
CatalogNO
3 
CollectionCD
4 
GBIFFamilyOriginal
5 
GBIFGenusOriginal
6 
InstitutionCD
7 
LastDateModified
8 
LatestDateCollected
9 
MaximumElevationInMeter
10 
MinimumElevationInMeter
11 
ScientificNameOriginal
inputs/NCU-NCSC/new_terms.csv
1 
Accession Number
2 
Accuracy
3 
Alt E/W
4 
Alt N/S
5 
Barcode
6 
Collect Date
7 
FIPS
8 
Format
9 
Full Taxon Name
10 
Lat (-=S)
11 
Long (-=W)
12 
SeriesName
13 
Typology
inputs/SpeciesLink/new_terms.csv
1 
AuthorYearOfScientificName
2 
DayOfYear
3 
dc_terms_modified
inputs/VegBank/unmapped_terms.csv
1 
""
2 
OMIT
3 
parentPlotID
inputs/GBIF/unmapped_terms.csv
1 
dcterms:modified
inputs/NCU-NCSC/unmapped_terms.csv
1 
""
2 
"Latitude/_replace:[""\?$""=]/value"
3 
"Longitude/_replace:[""\?$""=]/value"
4 
preparations
5 
typeStatus
inputs/SpeciesLink/unmapped_terms.csv
1 
JulianDay/_alt/1
2 
JulianDay/_alt/2
3 
ScientificNameAuthor/_alt/1
4 
ScientificNameAuthor/_alt/2
5 
ScientificNameAuthor/_alt/3
6 
dcterms:modified
7 
recordNumber/_alt/1
8 
recordNumber/_alt/2
9 
recordNumber/_alt/3
inputs/MO/new_terms.csv
1 
convertednotes
inputs/VegBank/new_terms.csv
1 
Division
2 
Forma
3 
Geographic Name
4 
Subclass
5 
Subdivision
6 
Subkingdom
7 
Superdivision
8 
Variety
9 
accessioncode
10 
area
11 
area|country|territory
12 
authordatum
13 
authore
14 
authorlocation
15 
authorn
16 
authorplantname
17 
authorplotcode
18 
authorzone
19 
autotaxoncover
20 
azimuth
21 
basalarea
22 
bryophytequality
23 
collectiondate
24 
collectionnumber
25 
collector_id
26 
confidentialityreason
27 
confidentialitystatus
28 
coverdispersion
29 
covermethod_id
30 
currentinterpretation
31 
d_currentaccepted
32 
d_obscount
33 
dateaccuracy
34 
dateentered
35 
dominantstratum
36 
dsgpoly
37 
effortlevel
38 
elevationaccuracy
39 
elevationrange
40 
emb_observation
41 
emb_plot
42 
emb_soilobs
43 
emb_taxoninterpretation
44 
emb_taxonobservation
45 
exchangecapacity
46 
fieldcover
47 
fieldht
48 
floatingcover
49 
floristicquality
50 
grouptype
51 
growthform1cover
52 
growthform1type
53 
growthform2cover
54 
growthform2type
55 
growthform3cover
56 
growthform3type
57 
homogeneity
58 
hydrologicregime
59 
int_currplantcode
60 
int_currplantcommon
61 
int_currplantconcept_id
62 
int_currplantscifull
63 
int_currplantscinamenoauth
64 
int_origplantcode
65 
int_origplantcommon
66 
int_origplantconcept_id
67 
int_origplantscifull
68 
int_origplantscinamenoauth
69 
interp_bestfit_cc_id
70 
interp_bestfit_ci_id
71 
interp_bestfit_code
72 
interp_bestfit_party_id
73 
interp_bestfit_partyname
74 
interp_bestfit_sciname
75 
interp_current_cc_id
76 
interp_current_ci_id
77 
interp_current_code
78 
interp_current_party_id
79 
interp_current_partyname
80 
interp_current_sciname
81 
interp_orig_cc_id
82 
interp_orig_ci_id
83 
interp_orig_code
84 
interp_orig_party_id
85 
interp_orig_partyname
86 
interp_orig_sciname
87 
interpretationdate
88 
interpretationtype
89 
landscapenarrative
90 
layoutnarrative
91 
lichenquality
92 
locationaccuracy
93 
methodnarrative
94 
museum_id
95 
museumaccessionnumber
96 
nameother
97 
nonvascularcover
98 
nonvascularht
99 
notesmgt
100 
notespublic
101 
numberoftaxa
102 
obsenddate
103 
observation_id
104 
observationnarrative
105 
obsstartdate
106 
organicdepth
107 
originaldata
108 
originalinterpretation
109 
parent_id
110 
party_id
111 
percentbaresoil
112 
percentbedrock
113 
percentlitter
114 
percentother
115 
percentrockgravel
116 
percentwater
117 
percentwood
118 
permanence
119 
phenologicaspect
120 
placementmethod
121 
plantcode
122 
plantconcept__accessioncode
123 
plantconcept__reference_id
124 
plantconcept_id
125 
plantdescription
126 
plantname
127 
plantname_id
128 
plotrationalenarrative
129 
plotvalidationlevel
130 
previousobs_id
131 
quadrangle
132 
reallatitude
133 
reallongitude
134 
reference_id
135 
region|state|province
136 
representativeness
137 
revisions
138 
rocktype
139 
role_id
140 
row_num
141 
shape
142 
shoredistance
143 
shrubcover
144 
shrubht
145 
soilclay
146 
soilcoarse
147 
soilcolor
148 
soildepth
149 
soildepthbottom
150 
soildepthtop
151 
soildescription
152 
soildrainage
153 
soilhorizon
154 
soilmoistureregime
155 
soilobs_id
156 
soilorganic
157 
soilph
158 
soilsand
159 
soilsilt
160 
soiltaxon_id
161 
soiltaxonsrc
162 
soiltexture
163 
standmaturity
164 
standsize
165 
stemlocation_id
166 
stemobservationarea
167 
stemsamplemethod
168 
stemsizelimit
169 
stratummethod_id
170 
submergedcover
171 
submergedht
172 
submitter_email
173 
submitter_givenname
174 
submitter_surname
175 
successionalstatus
176 
surficialdeposits
177 
taxonconfidence
178 
taxoninferencearea
179 
taxoninterpretation_accessioncode
180 
taxoninterpretation_id
181 
taxoninterpretation_plantname_id
182 
taxonobservation_accessioncode
183 
taxonobservation_id
184 
taxonobservation_reference_id
185 
taxonobservationarea
186 
topoposition
187 
toptaxon1name
188 
toptaxon2name
189 
toptaxon3name
190 
toptaxon4name
191 
toptaxon5name
192 
totalcover
193 
treecover
194 
treeht
195 
waterdepth
196 
watersalinity

Also available in: Unified diff