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Revision 4638

Added by Aaron Marcuse-Kubitza almost 12 years ago

inputs/*/*/map.csv: Changed empty mappings to self mappings, using the steps at <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Map_refactoring#Change-empty-mappings-to-self-mappings&gt;. Note that in map.full.csv and VegBIEN.csv, lines that have changed are always the result of the input field's case being changed to match the case of the datasource's actual column name.

View differences:

VegBIEN.csv
66 66 
DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
67 67 
coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1",Brad: Map instead as for voucher_string
68 68 
SourceVoucher,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."
69 
GenAuth,,** No join mapping for GenAuth **
70 
IsMorpho,,** No join mapping for IsMorpho **
71 
OrigAuth,,** No join mapping for OrigAuth **
72 
OrigRecordID,,** No join mapping for OrigRecordID **
73 
PlotID_index,,** No join mapping for PlotID_index **
74 
SpAuthStatus,,** No join mapping for SpAuthStatus **
75 
coll_inits,,** No join mapping for coll_inits **
76 
collector_code,,** No join mapping for collector_code ** Brad: OMIT
77 
common_name,,** No join mapping for common_name **
78 
det_by,,** No join mapping for det_by **
79 
dist,,** No join mapping for dist **
80 
fam_status,,** No join mapping for fam_status ** Brad: OMIT. This will be determined later by using TNRS.
81 
gen_status,,** No join mapping for gen_status ** Brad: OMIT. This will be determined later by using TNRS.
82 
height_class,,** No join mapping for height_class **
83 
height_m_commercial,,** No join mapping for height_m_commercial **
84 
ind_id,,** No join mapping for ind_id ** Brad: OMIT
85 
infra_auth_1,,** No join mapping for infra_auth_1 **
86 
morphocf,,** No join mapping for morphocf **
87 
morphoname,,** No join mapping for morphoname **
88 
name_status,,"** No join mapping for name_status ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
89 
other_annotations,,** No join mapping for other_annotations **
90 
perp_dist,,** No join mapping for perp_dist **
91 
phenology,,** No join mapping for phenology **
92 
species_code,,** No join mapping for species_code **
93 
temp_liandbh,,** No join mapping for temp_liandbh **
94 
tmp_del,,** No join mapping for tmp_del **

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