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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5055 about 12 years Aaron Marcuse-Kubitza import_all: Added import of .TNRS datasource, w...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5072 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: taxonomic terms: ...
  lib 5071 about 12 years Aaron Marcuse-Kubitza db_xml.py: put(): Parse input columns and proce...
  mappings 5072 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: taxonomic terms: ...
  schemas 5054 about 12 years Aaron Marcuse-Kubitza Moved tnrs table from public (schemas/vegbien.s...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 about 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 about 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 11.3 KB 5040 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Starting column-based ...
map 1.28 KB 4981 about 12 years Aaron Marcuse-Kubitza root map: Fixed custom public schema override t...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5072 09/27/2012 10:37 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonomic terms: Changed _first to _alt because some datasources have NULL values in scientificNameWithAuthorship or scientificName, so it can't just be used in place of the joined-together taxonomic ranks
5071 09/27/2012 10:19 AM Aaron Marcuse-Kubitza

db_xml.py: put(): Parse input columns and process values in separate loops, so that structural XML function optimization code can be inserted between them
5070 09/27/2012 10:12 AM Aaron Marcuse-Kubitza

sql_io.py: put_table(): Removed comment that can support in_tables of any fixed-size iterable type, because the iterable must be ordered so that the first table can be treated specially
5069 09/27/2012 10:09 AM Aaron Marcuse-Kubitza

sql_io.py: put_table(): Support in_tables of any fixed-size iterable type
5068 09/27/2012 09:13 AM Aaron Marcuse-Kubitza

mappings/Veg+-VegCore.csv: cationExchangeCapacity->cationExchangeCapacity_cmol_kg mapping: Removed ? prefix because a mapping to only one set of units is unambiguous (if additional units for cationExchangeCapacity are found, this will become an ambiguous mapping). Note that canon automatically removes punctuation from VegCore terms, so this mapping would previously have had the ? prefix autoremoved anyway (both in inputs/*/*/map.csv and recently also in Veg+-VegCore.csv).
5067 09/27/2012 09:06 AM Aaron Marcuse-Kubitza

mappings/Makefile: .Veg+-VegCore.csv.last_cleanup: Translate VegCore terms using itself so that any mapping to another Veg+ term automatically becomes a mapping to a VegCore term. .VegX-VegCore.csv.last_cleanup: Translate VegCore terms using Veg+-VegCore.csv to keep the terms up to date.
5066 09/27/2012 09:04 AM Aaron Marcuse-Kubitza

mappings/VegX-VegCore.csv: Translated VegCore terms using Veg+-VegCore.csv
5065 09/27/2012 09:00 AM Aaron Marcuse-Kubitza

mappings/Makefile: .VegCore.csv.last_cleanup, .VegCore-VegBIEN.csv.last_cleanup: Apply Veg+-VegCore.csv so that terms can easily be renamed just by adding a mapping in Veg+-VegCore.csv, which will auto-translate all places that use the term. .VegCore-VegBIEN.csv.last_cleanup: Canonicalize to VegCore.csv so case changes in VegCore terms will automatically propagate to VegCore-VegBIEN.csv.
5064 09/27/2012 08:46 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped verbatimScientificNameWithAuthorship, so that it links a verbatim taxonpath to the scrubbed taxonpath created from the primary taxonomic terms
5063 09/27/2012 08:36 AM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Renamed unscrubbedScientificNameWithAuthorship to the more standard verbatimScientificNameWithAuthorship, which is available now that the original taxondetermination terms use the original* prefix

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