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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5159 about 12 years Aaron Marcuse-Kubitza tnrs_db: Updated query for new three-level taxo...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5162 about 12 years Aaron Marcuse-Kubitza input.Makefile: Staging tables installation: $(...
  lib 5166 about 12 years Aaron Marcuse-Kubitza tnrs.py: encode_map: Removed '&', which is actu...
  mappings 5138 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: non-TNRS taxonpat...
  schemas 5141 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: placepath.canon_placepath_...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 over 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 11.3 KB 5040 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Starting column-based ...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5166 10/02/2012 09:04 PM Aaron Marcuse-Kubitza

tnrs.py: encode_map: Removed '&', which is actually not a special character for TNRS (although ';' is)

5165 10/02/2012 09:02 PM Aaron Marcuse-Kubitza

tnrs.py: encode_map: Added '_', which TNRS replaces with space

5164 10/02/2012 08:56 PM Aaron Marcuse-Kubitza

sql_io.py: append_csv(): In INSERT mode, print # rows read (different from # lines read if some fields contained embedded newlines) and # rows inserted (different from # rows read if some violated a constraint)

5163 10/02/2012 08:42 PM Aaron Marcuse-Kubitza

sql.py: insert(): Explicitly return None if the insert failed and a DuplicateKeyException or NullValueException was suppressed

5162 10/02/2012 07:13 PM Aaron Marcuse-Kubitza

input.Makefile: Staging tables installation: $(logInstall*Add): Fixed bug where the existing install log would be overwritten in quiet mode, even though this function should append its output to the log. Note that plain $(logInstall*) always overwrites the existing install log because it is used by the first install command.

5161 10/02/2012 06:53 PM Aaron Marcuse-Kubitza

strings.py: json_encode(): Fixed bug where '\n' and '\r' also needed to be encoded

5160 10/02/2012 06:50 PM Aaron Marcuse-Kubitza

tnrs.py: repeated_tnrs_request(): Also retry request in debug mode if an HTTPError is thrown, so that debugging info can also be obtained if there is a bug in the TNRS client

5159 10/01/2012 10:44 PM Aaron Marcuse-Kubitza

tnrs_db: Updated query for new three-level taxonpath hierarchy, where the concatenated name is now stored in identifyingtaxonomicname instead of taxonomicnamewithauthor

5158 10/01/2012 10:41 PM Aaron Marcuse-Kubitza

root map: Removed no longer needed public schema override, which is now handled by vegbien_dest

5157 10/01/2012 10:40 PM Aaron Marcuse-Kubitza

vegbien_dest: Allow user to specify a custom public schema in the $public env var. This makes custom public schema functionality available to all VegBIEN-accessing scripts, not just map.

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