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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5413 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonconcept: Renamed cano...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5441 over 12 years Aaron Marcuse-Kubitza input.Makefile: Staging tables installation: Do...
  lib 5444 over 12 years Aaron Marcuse-Kubitza sql_io.py: put_table(): insert_into_pkeys(): Ta...
  mappings 5420 over 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Mapped matchedGen...
  schemas 5440 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: *_ancestor tables: Added d...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 over 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 12.7 KB 5424 over 12 years Aaron Marcuse-Kubitza README.TXT: Documentation: To import and scrub ...
map 989 Bytes 5158 over 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5444 10/12/2012 12:11 AM Aaron Marcuse-Kubitza

sql_io.py: put_table(): insert_into_pkeys(): Take a query as the param instead of sql.mk_select()'s params, to allow the caller to pass in any query without needing insert_into_pkeys() to manually pass through those args
5443 10/11/2012 11:40 PM Aaron Marcuse-Kubitza

sql.py: constraint_cond(): Fixed NotImplementedError message to apply to this function
5442 10/11/2012 09:36 PM Aaron Marcuse-Kubitza

sql_io.py: put_table(): ignore_cond(): Log message: Replaced don't with do not so it wouldn't mess up syntax highlighting when viewing the log file in a text editor
5441 10/11/2012 09:07 PM Aaron Marcuse-Kubitza

input.Makefile: Staging tables installation: Don't delete %/header.csv on error, because header.csv is a byproduct rather than the primary output and is created roughly atomically
5440 10/11/2012 08:40 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: *_ancestor tables: Added descriptive comment that these are ancestor cross link tables
5439 10/11/2012 08:23 PM Aaron Marcuse-Kubitza

csvs.py: sniff(): Support multi-char delims using \t, such as \t|\t used by NCBI. Support custom line suffixes, such as \t| used by NCBI.
5438 10/11/2012 08:18 PM Aaron Marcuse-Kubitza

csvs.py: TsvReader.next(): Remove only the autodetected line ending instead of any standard line ending. Note that this requires all header override files to use the same line ending as the CSV they override, which is now the case.
5437 10/11/2012 08:15 PM Aaron Marcuse-Kubitza

csvs.py: is_tsv(): Support multi-char delimiters by checking only the first char of the delimiter
5436 10/11/2012 08:12 PM Aaron Marcuse-Kubitza

csvs.py: sniff(): Also autodetect the line ending
5435 10/11/2012 08:11 PM Aaron Marcuse-Kubitza

csvs.py: sniff(): Also autodetect the line ending

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