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1 6406 aaronmk
bien_web,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2 6409 aaronmk
observationID,"/_if[@name=""if specimen""]/cond/_exists",
3
dataSourceName,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",
4 6777 aaronmk
observationType,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
5 5756 aaronmk
plotCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
6 6073 aaronmk
plotID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
7 6774 aaronmk
observationType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
8 6756 aaronmk
observationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
9
observationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
10
dataSourceName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then",
11 6073 aaronmk
plotID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode/_if[@name=""if geovalidation""]/else",
12 5756 aaronmk
plotCode,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
13 6073 aaronmk
plotID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
14 5756 aaronmk
plotAreaHa,/location/area_m2/_ha_to_m2/value,
15
elevation_m,/location/elevation_m/_alt/1,
16 6432 aaronmk
collectionNumber,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
17
observationID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
18
isCultivated,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_alt/2",
19 5756 aaronmk
plotMethod,/location/locationevent/*_id/method/name,
20 6002 aaronmk
plotCode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
21 6073 aaronmk
plotID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/then",
22 6235 aaronmk
observationDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
23 5756 aaronmk
pctCover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
24
collectionNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
25 6791 aaronmk
observationID,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
26
dataSourceName,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name",
27 6795 aaronmk
dataSourceName,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_split:[separator="", ""]/value",
28 6374 aaronmk
observationID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
29 6992 aaronmk
plotCode,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
30
plotID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
31
collectionNumber,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/1",
32
taxon,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
33 6177 aaronmk
collector,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
34 6313 aaronmk
collectionNumber,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
35 6374 aaronmk
observationID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
36 6317 aaronmk
isCultivated,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/then/_alt/2",
37 6374 aaronmk
observationID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
38 5756 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname,
39 6359 aaronmk
taxon,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/null/_first/2",
40
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value",
41 6179 aaronmk
taxon,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/1",
42
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2",
43
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
44
taxonAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/2",
45 5756 aaronmk
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
46 6179 aaronmk
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
47 5756 aaronmk
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
48 6179 aaronmk
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
49 5756 aaronmk
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
50 6359 aaronmk
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/null/_first/2,
51
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value,
52 5788 aaronmk
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/1,
53
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2,
54
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
55
taxonAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/2,
56 5756 aaronmk
taxonAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,
57
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
58
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
59 5783 aaronmk
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
60 5756 aaronmk
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname,
61 5861 aaronmk
latitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
62
longitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
63 5855 aaronmk
country,/location/locationplace/*_id/place/country,
64
countyParish,/location/locationplace/*_id/place/county,
65 6179 aaronmk
latitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
66
longitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
67
country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
68 6303 aaronmk
countyParish,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
69 6179 aaronmk
stateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
70 5855 aaronmk
stateProvince,/location/locationplace/*_id/place/stateprovince,
71 7009 aaronmk
plotID,"/location/sourceaccessioncode/_if[@name=""if locationID""]/cond/_exists",
72
plotID,"/location/sourceaccessioncode/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/1",
73 6073 aaronmk
abund,,** No join mapping for *abund **
74
abund1,,** No join mapping for *abund1 **
75
abund10,,** No join mapping for *abund10 **
76
abund2.5,,** No join mapping for *abund2.5 **
77
acceptance,,** No join mapping for *acceptance **
78 6075 aaronmk
acceptance_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
79 6073 aaronmk
bien2_DBPlotID,,** No join mapping for *bien2_DBPlotID **
80 6075 aaronmk
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
81 6073 aaronmk
bien2_ObservationID,,** No join mapping for *bien2_ObservationID **
82 6075 aaronmk
bien2_ObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
83 6073 aaronmk
bien2_OccurID,,** No join mapping for *bien2_OccurID **
84 6075 aaronmk
bien2_OccurID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
85 6073 aaronmk
bien2_TraitObservationID,,** No join mapping for *bien2_TraitObservationID **
86 6075 aaronmk
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
87 6073 aaronmk
bien2_taxonomyID,,** No join mapping for *bien2_taxonomyID **
88 6075 aaronmk
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
89
collector_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
90 6073 aaronmk
countryError,,** No join mapping for *countryError **
91 6075 aaronmk
country_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
92 6073 aaronmk
dataSourceID,,** No join mapping for *dataSourceID **
93 6075 aaronmk
dataSourceID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
94 6073 aaronmk
dataSourceNamePrimary,,** No join mapping for *dataSourceNamePrimary **
95 6075 aaronmk
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
96
dataSourceName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
97
family_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
98
genus_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
99 6073 aaronmk
higherPlantGroup,,** No join mapping for higherPlantGroup **
100 6075 aaronmk
higherPlantGroup_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
101
identifiedBy_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
102 5756 aaronmk
isCultivatedReason,,** No join mapping for cultivatedBasis **
103 6075 aaronmk
isCultivatedReason_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
104
isCultivated_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
105 6073 aaronmk
isGeovalid,,** No join mapping for *isGeovalid **
106 6075 aaronmk
isGeovalid_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
107 6073 aaronmk
isNewWorld,,** No join mapping for isNewWorld **
108 6075 aaronmk
isNewWorld_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
109 6073 aaronmk
isValidLatLong,,** No join mapping for *isValidLatLong **
110 6075 aaronmk
isValidLatLong_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
111 6073 aaronmk
localityDescription,,** No join mapping for *localityDescription **
112 6075 aaronmk
observationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
113
observationType_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
114
plotAreaHa_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
115
plotCode_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
116
plotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
117
plotMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
118 6073 aaronmk
plotMinDbh,,** No join mapping for *plotMinDbh **
119 6075 aaronmk
plotMinDbh_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
120 6073 aaronmk
rank,,** No join mapping for *rank **
121 6075 aaronmk
rank_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
122
species_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
123 6073 aaronmk
stateProvinceError,,** No join mapping for *stateProvinceError **
124 6075 aaronmk
stateProvince_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
125
taxonAuthor_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
126 6073 aaronmk
taxonAuthorityVerbatim,,** No join mapping for *taxonAuthorityVerbatim **
127 6075 aaronmk
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
128 5756 aaronmk
taxonMorphospecies,,** No join mapping for scientificNameWithMorphospecies **
129 6075 aaronmk
taxonMorphospecies_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
130
taxon_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
131 6073 aaronmk
traitMethod,,** No join mapping for *traitMethod **
132 6075 aaronmk
traitMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
133 7045 aaronmk
traitName,,** No join mapping for traitName **
134 6075 aaronmk
traitName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
135 6073 aaronmk
traitUnit,,** No join mapping for *traitUnit **
136 6075 aaronmk
traitUnit_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
137 6073 aaronmk
traitValue,,** No join mapping for *traitValue **