1 |
7070
|
aaronmk
|
TNRS,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
2 |
7101
|
aaronmk
|
:0,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",Enables the taxonoccurrence CHECK constraint to pass
|
3 |
7070
|
aaronmk
|
Name_matched,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/3",
|
4 |
7101
|
aaronmk
|
:0,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",Enables the taxonoccurrence CHECK constraint to pass
|
5 |
|
|
:0,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,Enables the taxonoccurrence CHECK constraint to pass
|
6 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/cond/_exists","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
7 |
|
|
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_first/1",Contains family based on matched name
|
8 |
|
|
Family_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_first/2",Contains family in original string (uncommon)
|
9 |
7142
|
aaronmk
|
Name_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1",
|
10 |
|
|
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
11 |
|
|
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
12 |
|
|
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
|
13 |
|
|
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
14 |
|
|
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
15 |
|
|
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
16 |
7151
|
aaronmk
|
Name_matched_author,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2/_first/1",Contains author based on matched name
|
17 |
|
|
Author_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2/_first/2",Contains author in original string
|
18 |
7109
|
aaronmk
|
:_,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/1/_dateRangeStart/value/_now,
|
19 |
7131
|
aaronmk
|
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/matched_label_id/_if[@name=""if is canonical name""]/else/taxonlabel/taxonverbatim/morphospecies/_if[@name=""if has accepted name""]/then",
|
20 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/matched_label_id/_if[@name=""if is canonical name""]:[then=0]/cond","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
21 |
7070
|
aaronmk
|
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
|
22 |
|
|
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/taxonverbatim/verbatimrank",
|
23 |
|
|
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
24 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/cond/_exists","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
25 |
7070
|
aaronmk
|
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
26 |
|
|
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
27 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/cond/_exists","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
28 |
|
|
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_first/1",Contains family based on matched name
|
29 |
|
|
Family_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_first/2",Contains family in original string (uncommon)
|
30 |
|
|
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_first/1",Contains family based on matched name
|
31 |
|
|
Family_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_first/2",Contains family in original string (uncommon)
|
32 |
7070
|
aaronmk
|
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
|
33 |
|
|
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/rank,
|
34 |
|
|
Name_matched_url,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/sourceaccessioncode,
|
35 |
|
|
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond/_alt:[2=true]/1/_taxonomic_name_is_epithet/rank",
|
36 |
7149
|
aaronmk
|
:0,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/cond/_exists",Enables the taxonoccurrence CHECK constraint to pass
|
37 |
|
|
Family_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/else/_max/1",
|
38 |
|
|
Genus_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/else/_max/2",
|
39 |
|
|
Specific_epithet_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/else/_max/3",
|
40 |
|
|
Overall_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/else/_max/4",Assuming is a fraction based on the range of values
|
41 |
7070
|
aaronmk
|
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/taxonverbatim/morphospecies/_if[@name=""if has verbatim name""]/then",
|
42 |
7151
|
aaronmk
|
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_first/1,Contains family based on matched name
|
43 |
|
|
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_first/2,Contains family in original string (uncommon)
|
44 |
7142
|
aaronmk
|
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
|
45 |
|
|
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
46 |
|
|
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
|
47 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2/_if[@name=""if has verbatim name""]/cond/_exists","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
48 |
7142
|
aaronmk
|
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2/_if[@name=""if has verbatim name""]/else",
|
49 |
|
|
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
50 |
|
|
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
51 |
|
|
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
|
52 |
7151
|
aaronmk
|
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2/_first/1,Contains author based on matched name
|
53 |
|
|
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2/_first/2,Contains author in original string
|
54 |
7070
|
aaronmk
|
Taxonomic_status,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus,
|
55 |
7151
|
aaronmk
|
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author/_first/1,Contains author based on matched name
|
56 |
|
|
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author/_first/2,Contains author in original string
|
57 |
|
|
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_first/1,Contains family based on matched name
|
58 |
|
|
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_first/2,Contains family in original string (uncommon)
|
59 |
7070
|
aaronmk
|
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
60 |
7151
|
aaronmk
|
:true,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/morphospecies/_if[@name=""if has verbatim name""]/cond/_exists","This table contains only canonicalized names. (Not all names are accepted, but those that aren’t don’t (yet) have an accepted match.)"
|
61 |
7070
|
aaronmk
|
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/morphospecies/_if[@name=""if has verbatim name""]/else",
|
62 |
|
|
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
|
63 |
|
|
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonname,
|
64 |
|
|
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank,
|
65 |
7149
|
aaronmk
|
:0,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/cond/_exists",Enables the taxonoccurrence CHECK constraint to pass
|
66 |
|
|
Family_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/then/taxonfit/_max/1",
|
67 |
|
|
Genus_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/then/taxonfit/_max/2",
|
68 |
|
|
Specific_epithet_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/then/taxonfit/_max/3",
|
69 |
|
|
Overall_score,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/then/taxonfit/_max/4",Assuming is a fraction based on the range of values
|
70 |
7109
|
aaronmk
|
:_,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value/_now,
|
71 |
7102
|
aaronmk
|
:computer,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationtype,
|
72 |
7070
|
aaronmk
|
taxonoccurrence_id,/location/locationevent/taxonoccurrence/taxonoccurrence_id,
|
73 |
|
|
Annotations,,** No join mapping for *Annotations **
|
74 |
|
|
Author_score,,** No join mapping for *Author_score **
|
75 |
|
|
Infraspecific_epithet_2_matched,,** No non-empty join mapping for UNUSED **
|
76 |
|
|
Infraspecific_epithet_2_score,,** No non-empty join mapping for UNUSED **
|
77 |
|
|
Infraspecific_epithet_score,,** No join mapping for *Infraspecific_epithet_score **
|
78 |
7155
|
aaronmk
|
Infraspecific_rank,,** No non-empty join mapping for OMIT ** Omitted because Name_matched_rank is populated more often
|
79 |
7070
|
aaronmk
|
Infraspecific_rank_2,,** No non-empty join mapping for UNUSED **
|
80 |
|
|
Name_number,,** No non-empty join mapping for OMIT ** Identifies name only within one TNRS batch. Omitted because not globally unique.
|
81 |
|
|
Name_score,,** No join mapping for *Name_score **
|
82 |
7151
|
aaronmk
|
Name_submitted,,** No non-empty join mapping for OMIT ** Omitted because taxonoccurrence_id used to identify the taxonoccurrence instead
|
83 |
7070
|
aaronmk
|
Selected,,** No join mapping for *Selected **
|
84 |
|
|
Source,,** No join mapping for *Source **
|
85 |
|
|
Time_submitted,,** No join mapping for *Time_submitted **
|
86 |
|
|
Warnings,,** No join mapping for *Warnings **
|