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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 about 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 over 11 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 7802 over 11 years Aaron Marcuse-Kubitza my2pg.data: Replace \0 (with the backslash) wit...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  inputs 7809 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Regenerated from wiki. Ed...
  lib 7728 over 11 years Aaron Marcuse-Kubitza lib/common.Makefile: rsync: $(rsync): Also excl...
  mappings 7809 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Regenerated from wiki. Ed...
  planning 7786 over 11 years Aaron Marcuse-Kubitza Added planning/use_cases/rare_species.png
  schemas 7810 over 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: _locationnarrative_is_cult...
  validation 5971 over 11 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 12.1 KB 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
README.TXT 19 KB 7804 over 11 years Aaron Marcuse-Kubitza README.TXT: Full database import: To view progr...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 over 11 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 over 11 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 over 11 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
7810 03/05/2013 11:05 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: _locationnarrative_is_cultivated(): Fixed bug where need to use NULL instead of false (and bool_or() instead of OR) for a non-match, because the absence of a match doesn't mean it's not cultivated

7809 03/05/2013 03:02 AM Aaron Marcuse-Kubitza

mappings/VegCore.htm: Regenerated from wiki. Editing: Changed ambiguous terms templates to list the name of the alternative itself in the alternatives list, instead of the ambiguous term + a source suffix. This avoids the need to choose a source suffix for each alternative of an ambiguous term, as the ambiguous term itself (without the suffix) can be listed as the synonym. Coordinates: Disambiguated verbatimCoordinateSystem.

7808 03/05/2013 02:30 AM Aaron Marcuse-Kubitza

mappings/Makefile: VegCore.thesaurus.csv: `uniq`ify the map after applying initial translations, to support mappings that appear twice (once as the result of an alternative's synonym entry and again as the result of an ambiguous term's alternatives listing)

7807 03/04/2013 11:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: Added temperature_C, precipitation_m for possible use in John Wiens' plant climatic niche evolution project ("how fast is the rate of climatic niche evolution among species compared to projected changes in climate over the next 100 years? How do these rates compare for temperature and precipitation variables?")

7806 03/01/2013 08:17 PM Aaron Marcuse-Kubitza

mappings/VegCore.htm: Regenerated from wiki. Added specimenDescription.

7805 03/01/2013 08:00 PM Aaron Marcuse-Kubitza

mappings/VegCore.htm: Regenerated from wiki. Split apart identificationQualifier and taxonFit. Split apart taxonConfidence and identificationVerificationStatus. Moved identificationQualifier to new QualifiedTaxonName table.

7804 03/01/2013 07:48 PM Aaron Marcuse-Kubitza

README.TXT: Full database import: To view progress: Use tail -100 to show more of the log files, and not tail -f to avoid blocking when the user just wants to check the status

7803 03/01/2013 04:56 PM Aaron Marcuse-Kubitza

inputs/BRIT/specimen_flat/map.csv: Only map Notes_Plant to occurrenceRemarks if there is a separate Locality_Description, in order to filter out Notes_Plant values that concatenate everything together (often including a herbarium name that would mess up the cultivated flag parsing)

7802 03/01/2013 04:49 PM Aaron Marcuse-Kubitza

my2pg.data: Replace \0 (with the backslash) with 0 because \0 isn't allowed in UTF-8

7801 03/01/2013 03:53 PM Aaron Marcuse-Kubitza

root Makefile: VegBIEN DB: mk_db: Added command to import arbitrary DB users from a config file

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