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785
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aaronmk
|
##### Vars/functions
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| 2 |
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| 3 |
895
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aaronmk
|
bin := ../bin
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| 4 |
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| 5 |
748
|
aaronmk
|
coreMaps := DwC-VegBIEN.specimens.csv VegX-VegBIEN.organisms.csv
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| 6 |
744
|
aaronmk
|
chRootMaps := VegX-VegBIEN.plots.csv VegX-VegBIEN.stems.csv
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| 7 |
882
|
aaronmk
|
all := $(wildcard for_review/*) $(chRootMaps)
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| 8 |
744
|
aaronmk
|
|
| 9 |
785
|
aaronmk
|
##### General targets
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| 10 |
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| 11 |
744
|
aaronmk
|
all: _always $(coreMaps) $(chRootMaps)
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| 12 |
199
|
aaronmk
|
./review
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| 13 |
150
|
aaronmk
|
|
| 14 |
223
|
aaronmk
|
.SUFFIXES:
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| 15 |
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| 16 |
383
|
aaronmk
|
_always:
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| 17 |
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.PHONY: _always
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| 18 |
188
|
aaronmk
|
|
| 19 |
383
|
aaronmk
|
clean: _always
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| 20 |
196
|
aaronmk
|
$(RM) $(all)
|
| 21 |
188
|
aaronmk
|
|
| 22 |
423
|
aaronmk
|
remake: _always clean all ;
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| 23 |
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|
| 24 |
785
|
aaronmk
|
##### Core maps cleanup
|
| 25 |
198
|
aaronmk
|
|
| 26 |
895
|
aaronmk
|
ifneq ($(filter .%.last_cleanup,$(MAKECMDGOALS)),)
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| 27 |
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.%.last_cleanup: %
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| 28 |
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$(bin)/in_place $< $(bin)/simplify_xpath
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| 29 |
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$(bin)/in_place $< $(bin)/sort 1 0
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| 30 |
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touch $@
|
| 31 |
779
|
aaronmk
|
.PRECIOUS: .%.last_cleanup
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| 32 |
895
|
aaronmk
|
else
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| 33 |
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$(coreMaps): _always
|
| 34 |
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$(MAKE) $(@:%=.%.last_cleanup)
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| 35 |
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endif
|
| 36 |
350
|
aaronmk
|
|
| 37 |
785
|
aaronmk
|
##### Maps generated with ch_root
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| 38 |
212
|
aaronmk
|
|
| 39 |
744
|
aaronmk
|
chRoot = $(bin)/ch_root <$< >$@
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| 40 |
197
|
aaronmk
|
|
| 41 |
438
|
aaronmk
|
VegX-VegBIEN.plots.csv: VegX-VegBIEN.organisms.csv
|
| 42 |
188
|
aaronmk
|
env \
|
| 43 |
439
|
aaronmk
|
left_in_root='/*s/individualOrganismObservation/*ID->/*s/plotObservation' \
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| 44 |
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left_out_root='/*s/plotObservation' \
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| 45 |
525
|
aaronmk
|
right_in_root='/taxonoccurrence/*_id/locationevent' \
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| 46 |
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right_out_root='/locationevent' \
|
| 47 |
439
|
aaronmk
|
$(chRoot)
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| 48 |
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| 49 |
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VegX-VegBIEN.stems.csv: VegX-VegBIEN.organisms.csv
|
| 50 |
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env \
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| 51 |
441
|
aaronmk
|
left_in_root='/*s/individualOrganismObservation->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]' \
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| 52 |
504
|
aaronmk
|
left_out_root='/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]' \
|
| 53 |
681
|
aaronmk
|
right_in_root='/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation' \
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| 54 |
673
|
aaronmk
|
right_out_root='/stemobservation' \
|
| 55 |
439
|
aaronmk
|
$(chRoot)
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