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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 9496 over 11 years Aaron Marcuse-Kubitza added backups/*.md5
  bin 9530 over 11 years Aaron Marcuse-Kubitza bin/tnrs_db: documented how to estimate total r...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9541 over 11 years Aaron Marcuse-Kubitza inputs/.TNRS/schema.sql: MatchedTaxon: matchedF...
  lib 9547 over 11 years Aaron Marcuse-Kubitza lib/sh/binsearch.sh: binsearch(): echo $i at lo...
  mappings 9459 over 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: place.geo...
  planning 9403 over 11 years Aaron Marcuse-Kubitza added planning/workflow/validation/GeoDistKM.sq...
  schemas 9529 over 11 years Aaron Marcuse-Kubitza inputs/.TNRS/schema.sql, data.sql: updated TNRS...
  web 9389 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 22.8 KB 9532 over 11 years Aaron Marcuse-Kubitza bugfix: README.TXT: Full database import: scree...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9547 05/23/2013 11:30 PM Aaron Marcuse-Kubitza

lib/sh/binsearch.sh: binsearch(): echo $i at log_level 1 so it's displayed by default, as a progress indicator
9546 05/23/2013 11:29 PM Aaron Marcuse-Kubitza

lib/sh/binsearch.sh: binsearch(): echo the command being run using new echo_run()
9545 05/23/2013 11:25 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: log+: set PS4 from $log_level instead of relative to its previous value. this allows PS4 to work properly at negative log_levels, in spite of the inability to store a "negative" value in a prefix string.
9544 05/23/2013 11:23 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: added float_set_min()
9543 05/23/2013 11:22 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: log+(): log_level: set it using simpler $(()), since log_level will never be fractional (although verbosity can be). log_level may of course be fractional in invoked scripts, but that does not affect util.sh.
9542 05/23/2013 10:44 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: log++: also track a numeric log_level var, which follows the PS4 prefix
9541 05/23/2013 10:35 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: MatchedTaxon: matchedFamily: use Accepted_family when the Name_matched_accepted_family is not provided, as it's omitted by the current TNRS CSV schema
9540 05/23/2013 09:54 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: log+(): PS4: split if statement onto multiple lines for clarity
9539 05/23/2013 09:44 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: added back echo_run(), usable for internal commands where command() would be used for external commands
9538 05/23/2013 09:33 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: added int2bool()

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