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# Status Priority Subject Assignee Updated Due date % Done
636 New Normal support TNRS-matching names in "", insted of encoding them and letting TNRS return no match Aaron Marcuse-Kubitza 04/28/2017 05:13 AM

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903 Resolved High fix Ubuntu 14.04 upgrade bug that prevents Apache from displaying vegbiendev.nceas.ucsb.edu properly Aaron Marcuse-Kubitza 04/28/2017 04:41 AM

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904 Resolved Normal add MySQL public user to allow accessing the normalized VegCore data dictionary Aaron Marcuse-Kubitza 04/28/2017 04:40 AM

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887 Rejected Normal fix disk space leak that fills the disk and crashes the import Aaron Marcuse-Kubitza 04/28/2017 04:39 AM

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902 Resolved Normal fix bug that causes joining on the wrong columns in the import Aaron Marcuse-Kubitza 04/28/2017 04:39 AM

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905 Resolved High narrow down the cause of the import bug (incorrect join columns and disk space leak) Aaron Marcuse-Kubitza 04/28/2017 04:39 AM

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908 New Normal generate the source-general derived columns directly on the denormalized staging table Aaron Marcuse-Kubitza 04/28/2017 04:39 AM

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917 New Normal TNRS: Instructions for new version with TPL Aaron Marcuse-Kubitza 04/28/2017 04:38 AM

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944 New High fix phpPgAdmin bug that crashes the DB when browsing large tables Aaron Marcuse-Kubitza 04/28/2017 04:35 AM

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946 New Normal update the column names in the VegBIEN example queries to reflect Brian M's renamings Aaron Marcuse-Kubitza 04/28/2017 04:34 AM

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953 New High CVS and VegBank data Aaron Marcuse-Kubitza 04/28/2017 04:30 AM

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915 New Normal Taxon Name Validation Aaron Marcuse-Kubitza 04/28/2017 04:21 AM

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970 New High Write perspectives paper Ryan Pavlick 12/12/2014 02:37 PM 01/15/2015

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898 New Immediate remove dependencies on the development machine Aaron Marcuse-Kubitza 11/17/2014 08:47 AM

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869 New Immediate enable schema changes to be made on vegbiendev rather than the development machine Aaron Marcuse-Kubitza 11/17/2014 08:47 AM

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886 New Immediate move test DB to vegbiendev VM Aaron Marcuse-Kubitza 11/17/2014 08:27 AM

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814 New High rename columns by name, not position Aaron Marcuse-Kubitza 10/31/2014 03:24 PM

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961 New High test that staging tables can be reloaded from scratch Aaron Marcuse-Kubitza 10/26/2014 05:16 PM

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966 New Normal figure out why some rows are not getting geoscrubbed Aaron Marcuse-Kubitza 10/25/2014 03:29 PM

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943 New High in TNRS, the Constrain by Source option is applied incorrectly to the results download Aaron Marcuse-Kubitza 10/24/2014 03:18 PM

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965 Resolved High some VegBank plots are missing the plot name Aaron Marcuse-Kubitza 10/19/2014 06:35 PM

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945 New High incorrect synonym being selected in TNRS 10/17/2014 03:40 PM

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950 Resolved High fix view_full_occurrence_individual_view rows with is_geovalid NULL Aaron Marcuse-Kubitza 10/17/2014 11:27 AM

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963 New High fix slow loading of pages hosted on vegbiendev Aaron Marcuse-Kubitza 10/16/2014 12:47 PM

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962 New High walk through loading of datasources from scratch Aaron Marcuse-Kubitza 10/16/2014 09:38 AM

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951 Resolved High test that `make install` is able to fully re-create vegbiendev Aaron Marcuse-Kubitza 10/16/2014 09:28 AM

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955 Resolved High fix geovalidation duplicated rows Aaron Marcuse-Kubitza 10/14/2014 02:59 PM

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957 Resolved High add mechanism to customize NULL-equivalent strings used by staging table import Aaron Marcuse-Kubitza 10/14/2014 10:16 AM

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949 New Normal fix shortened view_full_occurrence_individual column names that are now ambiguous Aaron Marcuse-Kubitza 10/03/2014 03:22 PM

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883 Rejected Normal have import scripts regularly check disk space and pause processes if getting close to limit Aaron Marcuse-Kubitza 10/03/2014 03:21 PM

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934 New High Data Dictionary Aaron Marcuse-Kubitza 10/03/2014 03:19 PM 06/06/2014

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937 New Normal fix missing date fields Aaron Marcuse-Kubitza 10/03/2014 03:18 PM

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947 New Normal have all scripts that replace DB items rename the existing item out of the way rather than dropping it Aaron Marcuse-Kubitza 10/03/2014 03:17 PM

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952 New High refresh GBIF so it can be published Aaron Marcuse-Kubitza 09/16/2014 05:12 PM

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907 Resolved High troubleshoot rsync verification errors Aaron Marcuse-Kubitza 09/10/2014 05:45 PM

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476 New Normal develop map spreadsheet -> header override file translation utility Aaron Marcuse-Kubitza 09/10/2014 03:58 PM

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483 Resolved Normal rename staging table columns according to map.csv Aaron Marcuse-Kubitza 09/10/2014 03:56 PM

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948 Resolved High fix duplicated rows in view_full_occurrence_individual Aaron Marcuse-Kubitza 09/04/2014 10:04 AM

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928 New High switch to new TNRS setup Aaron Marcuse-Kubitza 08/25/2014 05:19 PM 05/16/2014

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831 New High make tests use their own public schema Aaron Marcuse-Kubitza 07/28/2014 04:50 PM

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940 Resolved High resequence datasources in dependency order Aaron Marcuse-Kubitza 07/14/2014 01:25 PM

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929 New Normal change TNRS client to store metadata Aaron Marcuse-Kubitza 06/26/2014 05:24 PM

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938 New Normal Enquist's taxon validation Aaron Marcuse-Kubitza 06/25/2014 01:19 PM

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916 New High Taxon name validation: VegBank Aaron Marcuse-Kubitza 06/19/2014 11:00 AM 05/16/2014

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935 Resolved High TNRS crashes when scrubbing names with two infraspecific epithets Aaron Marcuse-Kubitza 06/17/2014 05:25 PM

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936 New High in TNRS client, detect Internal Server Errors when they occur instead of after the pauses have timed out Aaron Marcuse-Kubitza 06/05/2014 04:42 AM

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927 Resolved Normal move morphospecies name formation to normalized DB Aaron Marcuse-Kubitza 05/27/2014 09:24 PM

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932 New Normal Discovering BIEN data through iPlant Brian Enquist 05/22/2014 04:43 PM

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931 New Normal BIEN db at iPlant Martha Narro 05/22/2014 04:32 PM

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909 New Normal in aggregating validations pipeline, support using input result sets from CSVs instead of only by querying the staging tables Aaron Marcuse-Kubitza 05/03/2014 05:30 PM

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884 Rejected High fix Postgres bug that causes query planner to use seq scans and slow sorts instead of index scans in the import Aaron Marcuse-Kubitza 04/23/2014 04:00 PM

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901 New Normal schedule regular pg_dump backups of the DB Aaron Marcuse-Kubitza 04/23/2014 03:16 PM

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878 New Normal fix crow's foot notation in ERD Aaron Marcuse-Kubitza 04/16/2014 10:16 PM

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899 New Normal remove dependencies on Mac Aaron Marcuse-Kubitza 04/16/2014 10:14 PM

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345 Resolved Normal integrate GNRS into VegBIEN 04/10/2014 03:24 AM

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326 Rejected Normal generic MOU template to request data 04/10/2014 03:21 AM

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485 New Normal track data provider's citation requirements in VegBIEN Aaron Marcuse-Kubitza 04/10/2014 03:19 AM

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882 Rejected High add limit on the # of parallel import processes Aaron Marcuse-Kubitza 04/02/2014 10:10 AM

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562 New Normal flatten the mappings Aaron Marcuse-Kubitza 03/28/2014 03:05 AM

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539 Rejected Normal get analytical_stem_view to use merge joins instead of hash joins Aaron Marcuse-Kubitza 03/28/2014 02:55 AM

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440 New Normal aggregating validations of imports Aaron Marcuse-Kubitza 03/28/2014 02:53 AM

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290 Resolved Normal benchmark tests for database loading Aaron Marcuse-Kubitza 03/28/2014 02:52 AM

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767 New High autodetect column mismatches Aaron Marcuse-Kubitza 03/18/2014 03:15 AM

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577 Rejected Normal use views instead of map spreadsheets to store the datasource mappings Aaron Marcuse-Kubitza 03/18/2014 03:10 AM

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584 Resolved Normal enable running all the import steps from one runscript Aaron Marcuse-Kubitza 03/18/2014 03:07 AM

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871 New Normal grant bien_read access to validation result tables Aaron Marcuse-Kubitza 02/23/2014 08:03 PM

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870 New Normal grant bien_read access to publishable staging tables Aaron Marcuse-Kubitza 02/23/2014 08:02 PM

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446 New Normal fix deadlock in INSERT IGNORE replacement Aaron Marcuse-Kubitza 02/23/2014 08:01 PM

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501 Resolved Normal find out which datasources won't allow their data to be publicly accessible Aaron Marcuse-Kubitza 02/23/2014 07:57 PM

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859 New Normal fix slowness in _taxonlabel_set_parent_id() Aaron Marcuse-Kubitza 01/20/2014 09:14 PM

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856 New Normal data provider feedback tables: include the individual records that have errors Aaron Marcuse-Kubitza 01/16/2014 10:42 AM

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857 New Normal standardize taxon ranks to a common vocabulary Aaron Marcuse-Kubitza 01/16/2014 10:40 AM

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816 New Normal re-run TNRS on mis-scrubbed names Aaron Marcuse-Kubitza 01/09/2014 09:44 AM

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561 New Normal make VegBIEN ID fields plain-text instead of numeric Aaron Marcuse-Kubitza 12/03/2013 05:54 AM

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815 New Normal auto-prepend table name to columns Aaron Marcuse-Kubitza 11/08/2013 10:10 PM

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294 Resolved Normal find plot data source provider to work with Aaron Brad Boyle 10/03/2013 01:10 PM

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297 Resolved Normal Request new data dump of specimen data from GBIF, this time in DwC format Brad Boyle 10/03/2013 01:10 PM

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301 Resolved Normal RAINFOR data Brad Boyle 10/03/2013 01:10 PM

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305 Resolved Normal Complete full-dataset validations for NYBG & SALVIAS Aaron Marcuse-Kubitza 10/03/2013 01:09 PM

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306 Resolved Normal Acquire additional plot data sets from providers willing to work with Aaron on mappings and validations Brad Boyle 10/03/2013 01:09 PM

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307 Resolved Normal Acquire additional specimen data sets in both DwC and DwCA format, esp. GBIF Brad Boyle 10/03/2013 01:09 PM

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312 Resolved Normal Finish importing SALVIAS data Aaron Marcuse-Kubitza 10/03/2013 01:09 PM

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320 Rejected Normal Convert user-defined VegX fields to first-class fields Aaron Marcuse-Kubitza 10/03/2013 01:08 PM

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324 Resolved Normal NYBG validations Aaron Marcuse-Kubitza 10/03/2013 01:08 PM

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333 Resolved Normal add traits table to VegBIEN Aaron Marcuse-Kubitza 10/03/2013 01:07 PM

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344 Resolved Normal contact John about GNRS/georeferencing Jim Regetz 10/03/2013 01:07 PM

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346 New Normal add georeferencing support to schema Aaron Marcuse-Kubitza 10/03/2013 01:06 PM

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377 Resolved Normal ask NYBG for direct access to server Brad Boyle 10/03/2013 01:06 PM

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424 New Normal Finish translating XML functions to SQL functions for column-based import Aaron Marcuse-Kubitza 10/03/2013 01:05 PM

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465 New Normal move issue tracker comments to wiki pages to ensure version history Aaron Marcuse-Kubitza 10/03/2013 01:03 PM

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466 Rejected Normal column-based import: avoid most exceptions by introspecting the DB structure instead of waiting for a parseable exception to be raised Aaron Marcuse-Kubitza 10/03/2013 01:03 PM

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467 New Normal underline all to do items in meetings notes Aaron Marcuse-Kubitza 10/03/2013 01:02 PM

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482 New Normal translate README.TXT to wiki page Aaron Marcuse-Kubitza 10/03/2013 01:01 PM

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544 New Normal integrate creation of analytical DB into automated testing Aaron Marcuse-Kubitza 10/03/2013 01:00 PM

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560 New Normal move VegCore data dictionary to a phpPgAdmin-accessible database Aaron Marcuse-Kubitza 10/03/2013 01:00 PM

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575 New Normal put all wiki attachments in svn Aaron Marcuse-Kubitza 10/03/2013 12:56 PM

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747 New Normal Run interpolation over all five case study regions 08/22/2013 12:23 PM

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746 New Normal Generate Global Monthly Median (Climatologies) MODIS LST 08/22/2013 12:19 PM

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745 New Normal Run interpolation over tiles for North America Alberto Guzman 08/22/2013 12:01 PM

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744 New Normal Create Global Grid for Interpolation Alberto Guzman 08/22/2013 11:58 AM

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