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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10031 over 11 years Aaron Marcuse-Kubitza bugfix: backups/.rsync_filter.download: need to...
  bin 10023 over 11 years Aaron Marcuse-Kubitza bugfix: bin/make: need to leave bin/, ~/bin/ in...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10043 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: test*.xml: turn on syncin...
  lib 10047 over 11 years Aaron Marcuse-Kubitza bugfix: lib/sh/make.sh: make(): invoke only the...
  mappings 9882 over 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: genus->taxonlabel...
  planning 9978 over 11 years Aaron Marcuse-Kubitza planning/workflow/bien3_architecture.pptx: stag...
  schemas 9991 over 11 years Aaron Marcuse-Kubitza schemas/VegBIEN/taxonomy/higherPlantGroup.xlsx....
  web 9997 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.5 KB 9917 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres-Linux: phpPgAdmin: ...
README.TXT 23 KB 10040 over 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: synchronization: fixe...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10047 06/26/2013 12:28 AM Aaron Marcuse-Kubitza

bugfix: lib/sh/make.sh: make(): invoke only the system make command instead of any wrapper for it in the PATH (by using self_sys instead of self), to prevent infinite recursion. single recursion is resolved by nonrecursive=1, but there are cases where mutual recursion occurs due to the presence of two, different bin/makes in the PATH (e.g. if you have two working copies with bin/make, and one is symlinked in your ~/bin/ folder), and these cases can only be resolved by clearing out the PATH completely (since the bin/makes do not know of each other's existence, in order to remove their parent dirs from the PATH).

10046 06/26/2013 12:23 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: self_sys alias: use new sys_cmd() instead of `command -p` so that only the command path resolution is performed with a limited PATH, and the invoked command itself inherits the full PATH

10045 06/26/2013 12:22 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added sys_cmd(), which runs a system command and allows running a system command of the same name as the script

10044 06/26/2013 12:20 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added echo_builtin()

10043 06/25/2013 06:37 PM Aaron Marcuse-Kubitza

inputs/.rsync_ignore: test*.xml: turn on syncing again, but always treat the local side of the sync (starscream or vegbiendev) as the authoritative copy since they are the machines the tests can be run on

10042 06/25/2013 05:18 PM Aaron Marcuse-Kubitza

/.rsync_ignore: temp files: hide them on upload so that they are never synced to jupiter. hiding is different than unidirectionally exclude'ing them, because it also causes them to be deleted on the destination if they were uploaded in previous syncs.

10041 06/25/2013 04:57 PM Aaron Marcuse-Kubitza

inputs/VegBIEN/TWiki/.rsync_ignore: /**: turn syncing back on, but only allow it unidirectionally from vegbiendev->jupiter->starscream to avoid clobbering the live site or the jupiter backup. this is probably the only dir whose authoritative copy is always on vegbiendev. for all other dirs, edits can be made wherever convenient, so no copy is authoritative and no sync directions need to be restricted.

10040 06/25/2013 04:27 PM Aaron Marcuse-Kubitza

/README.TXT: Maintenance: synchronization: fixed whitespace

10039 06/25/2013 04:07 PM Aaron Marcuse-Kubitza

inputs/.rsync_ignore: install.log.sql: only exclude this on starscream (the local machine), using new machine-specific .rsync_filters, so that vegbiendev's copies of this will be backed up

10038 06/25/2013 03:46 PM Aaron Marcuse-Kubitza

lib/sh/sync.sh: upload(): .rsync_filter: also support machine-specific filters, for cases when different machines produce the same file (e.g. a log file) but only one machine's copy should be backed up

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