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Name Size Revision Age Author Comment
  BIEN2 10896 over 11 years Aaron Marcuse-Kubitza added BIEN2/traits_observation_counts.xls
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  backups 11355 about 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 11423 about 11 years Aaron Marcuse-Kubitza bugfix: bin/make_analytical_db: when running in...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  derived 11347 about 11 years Paul Sarando Added instructions for dependencies in the README.
  exports 10853 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.zip
  inputs 11397 about 11 years Aaron Marcuse-Kubitza inputs/CVS/_src/: added refresh from Mike Lee
  lib 11426 about 11 years Aaron Marcuse-Kubitza bugfix: lib/sh/util.sh: is_dot_script(): need t...
  mappings 11107 about 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: nest all ...
  planning 11402 about 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: updated fo...
  schemas 11424 about 11 years Aaron Marcuse-Kubitza bugfix: schemas/vegbien.sql: taxondetermination...
  web 11403 about 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.7 KB 11150 about 11 years Aaron Marcuse-Kubitza /Makefile: mk_db: config/users.sql: unset ON_ER...
README.TXT 24.2 KB 11263 about 11 years Aaron Marcuse-Kubitza /README.TXT: Single datasource import: added po...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 661 Bytes 10881 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): updated runtime (2...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
11426 10/24/2013 03:17 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: is_dot_script(): need to subtract 1 from ${#BASH_LINENO[@]}, because this is the array length rather than the index of the last element as in Perl

11425 10/24/2013 02:58 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: added is_dot_script()

11424 10/24/2013 01:15 PM Aaron Marcuse-Kubitza

bugfix: schemas/vegbien.sql: taxondetermination_set_iscurrent(): is_datasource_current (used by analytical_stem_view): need to separately check if `determinationtype IS NULL`, because `determinationtype NOT IN (accepted, matched))` will return NULL (false) if determinationtype is NULL, causing no match

11423 10/24/2013 01:11 PM Aaron Marcuse-Kubitza

bugfix: bin/make_analytical_db: when running into a public schema other than "public", also pass this to `/run export_` (which currently uses $schema instead of $public)

11422 10/24/2013 01:10 PM Aaron Marcuse-Kubitza

bugfix: bin/import_all: fix $ when .-included without args (which causes bash to put the wrong values in $ instead of leaving it empty)

11421 10/24/2013 01:09 PM Aaron Marcuse-Kubitza

bin/import_all: `make schemas/$version/install`: reinstall instead to allow re-running the import to the same custom schema (e.g. 2013-10-18.Brian_Enquist.Canadensys)

11420 10/24/2013 01:07 PM Aaron Marcuse-Kubitza

bin/import_all: `make schemas/$version/install`: ignore errors if schema exists, to support running with -e

11419 10/23/2013 11:10 PM Aaron Marcuse-Kubitza

bugfix: bin/import_all: removing inputs/.TNRS/tnrs/tnrs.make.lock: use `"rm" -f` instead of plain "rm" to avoid having an error exit status, which will abort the script if run with the -e flag (as runscripts are)

11418 10/23/2013 11:02 PM Aaron Marcuse-Kubitza

lib/runscripts/util.run: run script template: changed sample command name to all() because each runscript requires this in order to be run without args

11417 10/23/2013 11:00 PM Aaron Marcuse-Kubitza

lib/runscripts/util.run: support scripts that are run as shell-includes (with leading "."), by allowing the calling script to manually invoke on_exit() without it then being invoked twice (the end of a shell-include does not trigger the EXIT trap)

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