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1 6406 aaronmk
VegCore,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2 7646 aaronmk
accessionNumber,"/_if[@name=""if specimen""]/cond/_exists",
3 7527 aaronmk
dataProviderRecordID,"/_if[@name=""if specimen""]/cond/_exists",
4 6409 aaronmk
occurrenceID,"/_if[@name=""if specimen""]/cond/_exists",
5 10848 aaronmk
taxonID,"/_if[@name=""if specimen""]/cond/_exists",
6 10716 aaronmk
source__version,"/_if[@name=""if specimen""]/else/source/edition",
7 10720 aaronmk
source__modified_date,"/_if[@name=""if specimen""]/else/source/pubdate",
8 12879 aaronmk
specimen_duplicate_institutions,"/_if[@name=""if specimen""]/else/source/shortname",
9 10722 aaronmk
datasetURL,"/_if[@name=""if specimen""]/else/source/url",
10 7469 aaronmk
observationGranularity,"/_if[@name=""if specimen""]/else/source/observationtype",
11 7646 aaronmk
sourceType,"/_if[@name=""if specimen""]/else/source/sourcetype",
12 4987 aaronmk
subplot,"/location/_if[@name=""if subplot""]/cond/_exists",
13 5053 aaronmk
subplotID,"/location/_if[@name=""if subplot""]/cond/_exists",
14 6542 aaronmk
locationName,"/location/_if[@name=""if subplot""]/else/authorlocationcode",
15 4333 aaronmk
locationID,"/location/authorlocationcode/_if[@name=""if locationID""]/cond/_exists",
16 7469 aaronmk
authorEventCode,"/location/authorlocationcode/_if[@name=""if locationID""]/else",
17
observationGranularity,"/location/authorlocationcode/_if[@name=""if plot""]/cond",
18 7527 aaronmk
dataProviderRecordID,"/location/authorlocationcode/_if[@name=""if plot""]/else",
19 6756 aaronmk
occurrenceID,"/location/authorlocationcode/_if[@name=""if plot""]/else",
20 7646 aaronmk
accessionNumber,"/location/authorlocationcode/_if[@name=""if catalogNumber""]/cond/_exists",
21
accessionNumber,"/location/authorlocationcode/_if[@name=""if specimen""]/cond/_exists",
22 7527 aaronmk
dataProviderRecordID,"/location/authorlocationcode/_if[@name=""if specimen""]/cond/_exists",
23 6375 aaronmk
occurrenceID,"/location/authorlocationcode/_if[@name=""if specimen""]/cond/_exists",
24 12879 aaronmk
specimen_duplicate_institutions,"/location/authorlocationcode/_if[@name=""if specimen""]/then",
25 7527 aaronmk
collection,"/location/authorlocationcode/_if[@name=""if catalogNumber""]/then",
26 7646 aaronmk
collectionURL,"/location/authorlocationcode/_if[@name=""if catalogNumber""]/then",
27 4333 aaronmk
voucherType,"/location/authorlocationcode/_if[@name=""if indirect voucher""]/cond",
28 7646 aaronmk
accessionNumber,"/location/authorlocationcode/_if[@name=""if indirect voucher""]/else",
29 7464 aaronmk
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
30 6542 aaronmk
locationName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
31 4324 aaronmk
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
32 6834 aaronmk
rights,//location/accessconditions,
33
accessRights,//location/accesslevel,
34 4770 aaronmk
plotArea_m2,//location/area_m2,
35 4788 aaronmk
plotArea_ha,//location/area_m2/_ha_to_m2/value,
36 4232 aaronmk
subplot,//location/authorlocationcode,
37 4796 aaronmk
elevationInMeters,//location/elevation_m,
38 4753 aaronmk
verbatimElevation,//location/elevation_m,
39 7703 aaronmk
minimumElevationInMeters,//location/elevation_m,
40
verbatimElevation_m,//location/elevation_m,
41 4753 aaronmk
maximumElevationInMeters,//location/elevation_m,
42 4804 aaronmk
verbatimElevation_m,//location/elevation_m,
43 4805 aaronmk
verbatimElevation_m,//location/elevationrange_m,
44 4820 aaronmk
verbatimElevation_m,//location/elevationrange_m,
45 7527 aaronmk
collectorNumber,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
46 6313 aaronmk
individualID,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
47 7000 aaronmk
individualObservationID,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
48 6313 aaronmk
occurrenceID,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
49
taxonOccurrenceID,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
50 10172 aaronmk
cultivated,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/else",
51 6317 aaronmk
oldGrowth,"//location/iscultivated/_if[@name=""if TaxonOccurrence""]/else",
52 6432 aaronmk
locality,//location/iscultivated,
53
verbatimLocality,//location/iscultivated,
54
habitat,//location/iscultivated,
55 4082 aaronmk
landform,//location/landform,
56 3996 aaronmk
samplingProtocol,//method/name,
57 6137 aaronmk
observationMeasure,//method/observationmeasure,
58 11996 aaronmk
project_participant,//project/projectcontributor[]/*_id/party/fullname,use [!...] negative lookahead assertion so that multiple project_participant columns will properly map to separate projectcontributor rows
59 4082 aaronmk
projectName,//project/projectname,
60
projectID,//project/sourceaccessioncode,
61 6547 aaronmk
projectStartDate,//project/startdate,
62
projectEndDate,//project/stopdate,
63 4987 aaronmk
subplot,"//location/locationevent/_if[@name=""if subplot""]/cond/_exists",
64
subplotID,"//location/locationevent/_if[@name=""if subplot""]/cond/_exists",
65 7469 aaronmk
authorEventCode,"//location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
66 4340 aaronmk
eventID,"//location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
67 7469 aaronmk
authorEventCode,"//location/locationevent/_if[@name=""if has event""]/cond/_exists",
68 5977 aaronmk
endDate,"//location/locationevent/_if[@name=""if has event""]/cond/_exists",
69
eventDate,"//location/locationevent/_if[@name=""if has event""]/cond/_exists",
70
eventID,"//location/locationevent/_if[@name=""if has event""]/cond/_exists",
71
startDate,"//location/locationevent/_if[@name=""if has event""]/cond/_exists",
72 6002 aaronmk
subplotID,"//location/locationevent/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/cond",
73
subplot,"//location/locationevent/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/cond",
74 6542 aaronmk
locationName,"//location/locationevent/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
75 6002 aaronmk
subplotID,"//location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond",
76
subplot,"//location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond",
77
locationID,"//location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/then",
78 7469 aaronmk
authorEventCode,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/authoreventcode",
79 6217 aaronmk
endDate,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/obsenddate",
80
eventDate,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/obsenddate",
81
startDate,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/obsstartdate",
82
eventDate,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/obsstartdate",
83 5977 aaronmk
eventID,"//location/locationevent/_if[@name=""if has event""]/then/parent_id/locationevent/sourceaccessioncode",
84 4082 aaronmk
communityID,//*/commname,
85
communityName,//commconcept/commdescription,
86 11107 aaronmk
stratum__name,//stratum/stratumname,
87
eventID,//locationevent/sourceaccessioncode,
88 7307 aaronmk
acceptedScientificName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/cond/_exists",
89
acceptedTaxonName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/cond/_exists",
90
taxonIsCanonical,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/matched_label_id/_if[@name=""if is canonical name""]/cond",
91
acceptedCultivar,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=cultivar]/taxonepithet,
92
acceptedForma,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=forma]/taxonepithet,
93
acceptedVariety,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=variety]/taxonepithet,
94
acceptedSubspecies,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=subspecies]/taxonepithet,
95
acceptedSpecificEpithet,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=species]/taxonepithet,
96
taxonIsCanonical,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_if[@name=""if is canonical name""]/cond/_exists",
97
acceptedGenus,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel/taxonomicname",
98
acceptedGenus,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=genus]/taxonepithet,
99
taxonIsCanonical,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_if[@name=""if is canonical name""]/cond/_exists",
100
acceptedFamily,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel/taxonomicname",
101
acceptedFamily,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=family]/taxonepithet,
102
acceptedOrder,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=order]/taxonepithet,
103
acceptedClass,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=class]/taxonepithet,
104
acceptedPhylum,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=phylum]/taxonepithet,
105
acceptedKingdom,//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id[rank=kingdom]/taxonepithet,
106
acceptedTaxonRank,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/rank",
107
acceptedInfraspecificEpithet,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet",
108
acceptedTaxonRank,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/rank",
109
acceptedScientificNameID,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/sourceaccessioncode",
110
acceptedFamily,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
111
acceptedScientificName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
112
acceptedTaxonName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
113
acceptedGenus,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
114
acceptedSpecificEpithet,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
115
acceptedSubspecies,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
116
acceptedInfraspecificEpithet,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_if[@name=""if has infraspecificEpithet""]/cond",
117
acceptedTaxonRank,"//locationevent/taxonoccurrence/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_if[@name=""if has infraspecificEpithet""]/then",
118
acceptedInfraspecificEpithet,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
119
acceptedVariety,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
120
acceptedForma,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
121
acceptedCultivar,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
122
acceptedScientificNameAuthorship,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname",
123
acceptedScientificNameAuthorship,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/author",
124
acceptedFamily,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/family",
125
acceptedGenus,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/genus",
126 7605 aaronmk
morphospeciesSuffix,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/morphospecies",
127 7307 aaronmk
acceptedSpecificEpithet,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/specific_epithet",
128
acceptedTaxonName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/taxonname",
129
acceptedScientificName,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/taxonomicname",
130
acceptedTaxonRank,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/*_id/taxonverbatim/verbatimrank",
131
dateIdentified,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/determinationdate",
132
dayIdentified,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/determinationdate",
133
monthIdentified,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/determinationdate",
134
yearIdentified,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/determinationdate",
135
taxonRemarks,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/notes",
136 7608 aaronmk
matchedFamilyConfidence_fraction,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/taxonconfidence",
137
matchedGenusConfidence_fraction,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/taxonconfidence",
138
matchedSpeciesConfidence_fraction,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/taxonconfidence",
139
matchedTaxonConfidence_fraction,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/taxonconfidence",
140 7307 aaronmk
identificationQualifier,"//locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination/taxonfit",
141 6217 aaronmk
dateCollected,//aggregateoccurrence/collectiondate,
142 4566 aaronmk
dayCollected,//aggregateoccurrence/collectiondate,
143
monthCollected,//aggregateoccurrence/collectiondate,
144
yearCollected,//aggregateoccurrence/collectiondate,
145 3982 aaronmk
individualCount,//aggregateoccurrence/count,
146 4789 aaronmk
coverPercent,//aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
147 4082 aaronmk
censusNumber,"//aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]/definedvalue",
148 4781 aaronmk
intercept_m,//aggregateoccurrence/linecover_m,
149 4788 aaronmk
intercept_cm,//aggregateoccurrence/linecover_m/_cm_to_m/value,
150 7713 aaronmk
occurrenceRemarks,//aggregateoccurrence/notes,
151 7195 aaronmk
individualCode,//plantobservation/authorplantcode,
152 7527 aaronmk
collectorNumber,//plantobservation/authorplantcode,
153 3969 aaronmk
sex,"//plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
154 7610 aaronmk
reproductiveCondition,//plantobservation/reproductivecondition,
155 7000 aaronmk
individualObservationID,//plantobservation/sourceaccessioncode,
156 4075 aaronmk
individualID,//plantobservation/sourceaccessioncode,
157 4082 aaronmk
voucherType,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond",
158 7646 aaronmk
accessionNumber,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
159 7527 aaronmk
collection,//specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
160 7646 aaronmk
collectionURL,//specimenreplicate/collectioncode_dwc,
161 7198 aaronmk
voucherType,"//specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/cond",
162 7527 aaronmk
collectorNumber,"//specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
163 12886 aaronmk
accessionNumber,"//duplicate_institutions_sourcelist_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
164
dataProviderRecordID,"//duplicate_institutions_sourcelist_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
165
occurrenceID,"//duplicate_institutions_sourcelist_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
166
specimen_duplicate_institutions,"//duplicate_institutions_sourcelist_id/sourcelist/_if[@name=""if specimen""]/then/name",
167
specimen_duplicate_institutions,"//duplicate_institutions_sourcelist_id/sourcelist/sourcename/name/_split:[separator=""[,;] *""]/value",
168 7527 aaronmk
dataProviderRecordID,//specimenreplicate/sourceaccessioncode,
169 3969 aaronmk
occurrenceID,//specimenreplicate/sourceaccessioncode,
170 4082 aaronmk
stemCount,//plantobservation/stemcount,
171 4364 aaronmk
authorStemCode,//stemobservation/authorstemcode,
172 7469 aaronmk
basalDiameter_m,//stemobservation/basaldiameter_m,
173 7467 aaronmk
basalDiameter_cm,//stemobservation/basaldiameter_m/_cm_to_m/value,
174 7468 aaronmk
basalDiameter_in,//stemobservation/basaldiameter_m/_in_to_m/value,
175 4082 aaronmk
canopyForm,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
176
canopyPosition,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
177 7469 aaronmk
diameterBreastHeightGentry_m,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue",
178 7467 aaronmk
diameterBreastHeightGentry_cm,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue/_cm_to_m/value",
179 4082 aaronmk
lianaInfestation,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
180
stemNotes,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue",
181 4846 aaronmk
diameterBreastHeight_m,//stemobservation/diameterbreastheight_m,
182 4860 aaronmk
diameterBreastHeight_cm,//stemobservation/diameterbreastheight_m/_cm_to_m/value,
183 4864 aaronmk
diameterBreastHeight_in,//stemobservation/diameterbreastheight_m/_in_to_m/value,
184 5540 aaronmk
height_m,//stemobservation/height_m,
185 5560 aaronmk
height_ft,//stemobservation/height_m/_ft_to_m/value,
186 7469 aaronmk
heightFirstBranch_m,//stemobservation/heightfirstbranch_m,
187 4359 aaronmk
stemID,//stemobservation/sourceaccessioncode,
188 4828 aaronmk
tag,//stemobservation/tag,
189 5532 aaronmk
organismX_m,//stemobservation/xposition_m,
190
organismY_m,//stemobservation/yposition_m,
191 7469 aaronmk
aggregateOrganismObservationID,//aggregateoccurrence/sourceaccessioncode,
192
authorEventCode,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
193 5176 aaronmk
eventID,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
194
locationID,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
195 6542 aaronmk
locationName,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
196 6999 aaronmk
individualID,"//taxonoccurrence/authortaxoncode/_if[@name=""if individual""]/cond/_exists",
197 7000 aaronmk
individualObservationID,"//taxonoccurrence/authortaxoncode/_if[@name=""if individual""]/cond/_exists",
198 6999 aaronmk
stemID,"//taxonoccurrence/authortaxoncode/_if[@name=""if individual""]/cond/_exists",
199
authorTaxonCode,"//taxonoccurrence/authortaxoncode/_if[@name=""if individual""]/else",
200 7195 aaronmk
individualCode,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
201
tag,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
202 7527 aaronmk
collectorNumber,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
203 5947 aaronmk
originalTaxonName,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
204 5632 aaronmk
scientificName,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
205 5947 aaronmk
taxonName,"//taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then",
206 6171 aaronmk
recordedBy,//party/fullname,
207 6831 aaronmk
recordedBy_givenName,//party/fullname,
208
recordedBy_surName,//party/fullname,
209 4082 aaronmk
growthForm,//taxonoccurrence/growthform,
210 7527 aaronmk
collectorNumber,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
211
dataProviderRecordID,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
212 6313 aaronmk
individualID,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
213 7000 aaronmk
individualObservationID,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
214 6313 aaronmk
occurrenceID,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
215
taxonOccurrenceID,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
216 10172 aaronmk
cultivated,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/then",
217 6317 aaronmk
oldGrowth,"//taxonoccurrence/iscultivated/_if[@name=""if TaxonOccurrence""]/then",
218 3969 aaronmk
establishmentMeans,//taxonoccurrence/iscultivated,
219
establishmentMeans,//taxonoccurrence/isnative,
220 4371 aaronmk
taxonOccurrenceID,//taxonoccurrence/sourceaccessioncode,
221 7469 aaronmk
aggregateOrganismObservationID,"//taxonoccurrence/sourceaccessioncode/_if[@name=""if organism in AggregateOccurrence""]/cond/_exists",
222 7000 aaronmk
individualObservationID,"//taxonoccurrence/sourceaccessioncode/_if[@name=""if organism in AggregateOccurrence""]/else",
223 4976 aaronmk
individualID,"//taxonoccurrence/sourceaccessioncode/_if[@name=""if organism in AggregateOccurrence""]/else",
224 7527 aaronmk
dataProviderRecordID,//taxonoccurrence/sourceaccessioncode,
225 4834 aaronmk
occurrenceID,//taxonoccurrence/sourceaccessioncode,
226 12961 aaronmk
aggregateOrganismObservationID,//taxonoccurrence/sourceaccessioncode,
227 11512 aaronmk
identifiedBy,//taxonoccurrence/taxondetermination[=true]/*_id/party/fullname,
228
parentScientificNameID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel/sourceaccessioncode,
229
parentTaxonConceptID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel/sourceaccessioncode,
230
parentTaxonID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel/sourceaccessioncode,
231 5930 aaronmk
taxonIsCanonical,"//taxonlabel/matched_label_id/_if[@name=""if is canonical name""]/cond",
232 5608 aaronmk
parentScientificNameID,"//parent_id/taxonlabel/_if[@name=""if has explicit parent""]/cond/_exists",
233
parentTaxonConceptID,"//parent_id/taxonlabel/_if[@name=""if has explicit parent""]/cond/_exists",
234
parentTaxonID,"//parent_id/taxonlabel/_if[@name=""if has explicit parent""]/cond/_exists",
235
taxonRank,"//parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
236
cultivar,//taxonlabel/parent_id[rank=cultivar]/taxonepithet,
237
forma,//taxonlabel/parent_id[rank=forma]/taxonepithet,
238
variety,//taxonlabel/parent_id[rank=variety]/taxonepithet,
239
subspecies,//taxonlabel/parent_id[rank=subspecies]/taxonepithet,
240
specificEpithet,//taxonlabel/parent_id[rank=species]/taxonepithet,
241
genus,//taxonlabel/parent_id[rank=genus]/taxonepithet,
242
family,//taxonlabel/parent_id[rank=family]/taxonepithet,
243
order,//taxonlabel/parent_id[rank=order]/taxonepithet,
244
class,//taxonlabel/parent_id[rank=class]/taxonepithet,
245
phylum,//taxonlabel/parent_id[rank=phylum]/taxonepithet,
246
kingdom,//taxonlabel/parent_id[rank=kingdom]/taxonepithet,
247 11512 aaronmk
infraspecificEpithet,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
248
taxonRank,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/rank,
249
scientificNameID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/sourceaccessioncode,
250
taxonConceptID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/sourceaccessioncode,
251
taxonID,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/sourceaccessioncode,
252
nameAccordingTo,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonconcept/concept_reference_id/source/shortname,
253 5733 aaronmk
taxonRank,"//taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond",
254 5946 aaronmk
taxonNameOrEpithet,"//taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/then",
255 11512 aaronmk
family,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
256
scientificName,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
257
taxonName,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
258
genus,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
259
specificEpithet,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
260 7150 aaronmk
taxonIsCanonical,"//taxonlabel/taxonomicname/_if[@name=""if has verbatim name""]/cond/_exists",
261 7605 aaronmk
morphospeciesSuffix,"//taxonlabel/taxonomicname/_if[@name=""if has verbatim name""]/else",
262 11512 aaronmk
subspecies,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
263 5656 aaronmk
infraspecificEpithet,"//taxonlabel/taxonomicname/_if[@name=""if has infraspecificEpithet""]/cond",
264
taxonRank,"//taxonlabel/taxonomicname/_if[@name=""if has infraspecificEpithet""]/then",
265 11512 aaronmk
infraspecificEpithet,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
266
variety,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
267
forma,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
268
cultivar,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
269
scientificNameAuthorship,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
270
taxonNameOrEpithet,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
271
taxonomicStatus,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus,
272
scientificNameAuthorship,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/author,
273
family,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/family,
274
genus,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/genus,
275
morphospeciesSuffix,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/morphospecies,
276
specificEpithet,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/specific_epithet,
277 13115 aaronmk
subspecies,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/subspecies,
278 11512 aaronmk
taxonName,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/taxonname,
279
scientificName,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/taxonomicname,
280
taxonRank,//taxonoccurrence/taxondetermination[=true]/*_id/taxonverbatim/verbatimrank,
281 7149 aaronmk
taxonOccurrenceID,"//taxonoccurrence/taxondetermination/_if[@name=""if has taxondetermination""]/cond/_exists",
282 7608 aaronmk
matchedFamilyConfidence_fraction,"//taxonoccurrence/taxondetermination/_if[@name=""if has taxondetermination""]/then/taxonconfidence",
283
matchedGenusConfidence_fraction,"//taxonoccurrence/taxondetermination/_if[@name=""if has taxondetermination""]/then/taxonconfidence",
284
matchedSpeciesConfidence_fraction,"//taxonoccurrence/taxondetermination/_if[@name=""if has taxondetermination""]/then/taxonconfidence",
285
matchedTaxonConfidence_fraction,"//taxonoccurrence/taxondetermination/_if[@name=""if has taxondetermination""]/then/taxonconfidence",
286 11512 aaronmk
dateIdentified,//taxonoccurrence/taxondetermination[=true]/determinationdate,
287
dayIdentified,//taxonoccurrence/taxondetermination[=true]/determinationdate,
288
monthIdentified,//taxonoccurrence/taxondetermination[=true]/determinationdate,
289
yearIdentified,//taxonoccurrence/taxondetermination[=true]/determinationdate,
290
identificationType,//taxonoccurrence/taxondetermination[=true]/determinationtype,
291 11513 aaronmk
taxon_determination__is_current,//taxonoccurrence/taxondetermination[=true]/iscurrent__verbatim,
292
taxon_determination__is_original,//taxonoccurrence/taxondetermination[=true]/isoriginal,
293 11512 aaronmk
taxonRemarks,//taxonoccurrence/taxondetermination[=true]/notes,
294
identificationQualifier,//taxonoccurrence/taxondetermination[=true]/taxonfit,
295 5657 aaronmk
originalScientificNameAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/author,
296
originalFamily,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/family,
297
originalGenus,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/genus,
298 7200 aaronmk
morphoname,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/morphoname,
299 5783 aaronmk
originalSpecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/specific_epithet,
300 5948 aaronmk
originalTaxonName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonname,
301 5657 aaronmk
originalScientificName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonomicname,
302
originalTaxonRank,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/verbatimrank,
303 5062 aaronmk
originalIdentificationQualifier,//taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
304 7069 aaronmk
taxonOccurrencePkey,//taxonoccurrence/taxonoccurrence_id,
305 7505 aaronmk
measurementName,//trait/name,
306 6882 aaronmk
measurementUnit,//trait/units,
307
measurementValue,//trait/value,
308 4082 aaronmk
voucherType,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond",
309 7646 aaronmk
accessionNumber,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
310 7197 aaronmk
voucherType,"//specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/cond",
311 7527 aaronmk
collectorNumber,"//specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
312 12000 aaronmk
event__participant,//locationevent/locationeventcontributor[]/*_id/party/fullname,use [!...] negative lookahead assertion so that multiple event__participant columns will properly map to separate locationeventcontributor rows
313 11107 aaronmk
endDate,//locationevent/obsenddate,
314
eventDate,//locationevent/obsenddate,
315
startDate,//locationevent/obsstartdate,
316
eventDate,//locationevent/obsstartdate,
317
precipitation_m,//locationevent/precipitation_m,
318
precipitation_mm,//locationevent/precipitation_m/_mm_to_m/value,
319
acidity_percent,//soilsample/acidity_fraction/_percent_to_fraction/value,
320
baseSaturation_percent,//soilsample/basesaturation_fraction/_percent_to_fraction/value,
321
calcium_percent,//soilsample/calcium_fraction/_percent_to_fraction/value,
322
carbon_percent,//soilsample/carbon_fraction/_percent_to_fraction/value,
323
cationExchangeCapacity_cmol_kg,//soilsample/cationexchangecapacity_cmol_kg,
324
clay_percent,//soilsample/clay_fraction/_percent_to_fraction/value,
325
conductivity,//soilsample/conductivity,
326
magnesium_percent,//soilsample/magnesium_fraction/_percent_to_fraction/value,
327
nitrogen_percent,//soilsample/nitrogen_fraction/_percent_to_fraction/value,
328
organic_percent,//soilsample/organic_fraction/_percent_to_fraction/value,
329
ph,//soilsample/ph,
330
phosphorus_percent,//soilsample/phosphorus_fraction/_percent_to_fraction/value,
331
potassium_percent,//soilsample/potassium_fraction/_percent_to_fraction/value,
332
sand_percent,//soilsample/sand_fraction/_percent_to_fraction/value,
333
silt_percent,//soilsample/silt_fraction/_percent_to_fraction/value,
334
sodium_percent,//soilsample/sodium_fraction/_percent_to_fraction/value,
335
texture,//soilsample/texture,
336 7469 aaronmk
temperature_C,//locationevent/temperature_c,
337 7703 aaronmk
minimumDepthInMeters,//locationevent/waterdepth_m,
338 4753 aaronmk
maximumDepthInMeters,//locationevent/waterdepth_m,
339 3969 aaronmk
locality,//location/locationnarrative,
340
verbatimLocality,//location/locationnarrative,
341
habitat,"//location/locationnarrative/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
342 8078 aaronmk
locationRemarks,//location/locationnarrative,
343 6250 aaronmk
coordinateUncertaintyInMeters,//coordinates/coordsaccuracy_m,
344 5861 aaronmk
footprintWKT,//coordinates/footprintgeometry_dwc,
345 7665 aaronmk
latitude_deg,//coordinates/latitude_deg/_dms_to_dd/deg,
346
latitude_min,//coordinates/latitude_deg/_dms_to_dd/min,
347 7667 aaronmk
latitude_sec,//coordinates/latitude_deg/_dms_to_dd/sec,
348 7680 aaronmk
latitude_DMS,//coordinates/latitude_deg/_dms_to_dd/value,
349 5861 aaronmk
decimalLatitude,//coordinates/latitude_deg,
350 7665 aaronmk
longitude_deg,//coordinates/longitude_deg/_dms_to_dd/deg,
351
longitude_min,//coordinates/longitude_deg/_dms_to_dd/min,
352 7667 aaronmk
longitude_sec,//coordinates/longitude_deg/_dms_to_dd/sec,
353 7680 aaronmk
longitude_DMS,//coordinates/longitude_deg/_dms_to_dd/value,
354 5861 aaronmk
decimalLongitude,//coordinates/longitude_deg,
355 6560 aaronmk
verbatimCoordinates,//coordinates/verbatimcoordinates,
356 5861 aaronmk
latitude_DMS,//coordinates/verbatimlatitude,
357
verbatimLatitude,//coordinates/verbatimlatitude,
358
longitude_DMS,//coordinates/verbatimlongitude,
359
verbatimLongitude,//coordinates/verbatimlongitude,
360 10565 aaronmk
municipality,//*_id/placename[rank=municipality]/placename,
361 5855 aaronmk
continent,//place/continent,
362
country,//place/country,
363
county,//place/county,
364 6122 aaronmk
acceptedDecimalLatitude,//*_id/coordinates/latitude_deg,""".,"" sorts it with other coordinates mappings"
365
acceptedDecimalLongitude,//*_id/coordinates/longitude_deg,""".,"" sorts it with other coordinates mappings"
366 7668 aaronmk
latitude_deg,//*_id/coordinates/latitude_deg/_dms_to_dd/deg,
367
latitude_min,//*_id/coordinates/latitude_deg/_dms_to_dd/min,
368
latitude_sec,//*_id/coordinates/latitude_deg/_dms_to_dd/sec,
369 7680 aaronmk
latitude_DMS,//*_id/coordinates/latitude_deg/_dms_to_dd/value,
370 6122 aaronmk
decimalLatitude,//*_id/coordinates/latitude_deg,""".,"" sorts it with other coordinates mappings"
371 7668 aaronmk
longitude_deg,//*_id/coordinates/longitude_deg/_dms_to_dd/deg,
372
longitude_min,//*_id/coordinates/longitude_deg/_dms_to_dd/min,
373
longitude_sec,//*_id/coordinates/longitude_deg/_dms_to_dd/sec,
374 7680 aaronmk
longitude_DMS,//*_id/coordinates/longitude_deg/_dms_to_dd/value,
375 6122 aaronmk
decimalLongitude,//*_id/coordinates/longitude_deg,""".,"" sorts it with other coordinates mappings"
376 5997 aaronmk
acceptedCountry,//place/country,
377 6279 aaronmk
acceptedCounty,//place/county,
378 5997 aaronmk
acceptedStateProvince,//place/stateprovince,
379 5958 aaronmk
country,//place/country,
380 6279 aaronmk
county,//place/county,
381 5936 aaronmk
distanceToCountry_km,//place/distance_to_country_m/_km_to_m/value,
382
distanceToStateProvince_km,//place/distance_to_state_m/_km_to_m/value,
383 9459 aaronmk
geovalid,//place/geovalid,
384
latLongDomainValid,//place/geovalid,
385
latLongInCountry,//place/geovalid,
386
latLongInStateProvince,//place/geovalid,
387
latLongInCounty,//place/geovalid,
388 5958 aaronmk
stateProvince,//place/stateprovince,
389 5855 aaronmk
stateProvince,//place/stateprovince,
390 4852 aaronmk
parentPlotName,//location/authorlocationcode,
391
parentLocationID,//location/sourceaccessioncode,
392 4753 aaronmk
slopeAspect,//location/slopeaspect_deg,
393 7703 aaronmk
minSlopeAspect,//location/slopeaspect_deg,
394 4753 aaronmk
maxSlopeAspect,//location/slopeaspect_deg,
395 4786 aaronmk
slopeGradient,//location/slopegradient_fraction,
396 7703 aaronmk
minSlopeGradient,//location/slopegradient_fraction,
397 4786 aaronmk
maxSlopeGradient,//location/slopegradient_fraction,
398 4286 aaronmk
subplotID,//location/sourceaccessioncode,
399 7009 aaronmk
locationID,"//location/sourceaccessioncode/_if[@name=""if locationID""]/cond/_exists",
400
subplot,"//location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_exists",
401
locationID,"//location/sourceaccessioncode/_if[@name=""if subplot""]/then",
402
subplot,"//location/sourceaccessioncode/_if[@name=""if subplot""]/then",
403 4753 aaronmk
subplotX,//location/sublocationxposition_m,
404
subplotY,//location/sublocationyposition_m,
405 4818 aaronmk
verbatimElevation,//location/verbatimelevation,
406 4806 aaronmk
verbatimElevation_m,//location/verbatimelevation,
407 10288 aaronmk
DUPLICATE,,
408 10616 aaronmk
EQUIV,,
409 4895 aaronmk
OMIT,,
410
PRIVATE,,
411
UNUSED,,