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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5928 about 12 years Aaron Marcuse-Kubitza bin/map: map_rows(): map_table(): Fixed bug whe...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5932 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: matched taxonlabe...
  lib 5913 about 12 years Aaron Marcuse-Kubitza lib/common.Makefile: Filesystem: $(wildcard/): ...
  mappings 5932 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: matched taxonlabe...
  schemas 5935 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Added _km_to_m()
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.87 KB 5679 about 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: Schemas: schemas/rot...
README.TXT 12.6 KB 5917 about 12 years Aaron Marcuse-Kubitza Calls to `make inputs/.TNRS/cleanup`: Do `make ...
map 989 Bytes 5158 over 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5935 11/01/2012 07:39 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added _km_to_m()

5934 11/01/2012 07:36 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added _km_to_m()

5933 11/01/2012 07:31 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: place: Added georeference_valid, distance_to_country_m, distance_to_state_m

5932 11/01/2012 07:18 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: matched taxonlabel's ancestors: Only create the cross links to NCBI if the name is accepted (taxonIsCanonical)

5931 11/01/2012 06:55 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: accepted* taxonomic terms: If is canonical name, don't populate a separate accepted taxonlabel because the taxonlabel itself is accepted. If is not canonical name, populate matched_label_id directly when the row is created instead of waiting until after all rows are created and using _taxonlabel_set_matched_label_id(). This is possible now that accepted taxonlabels occur only in TNRS's tnrs_accepted table, which is specially marked as taxonIsCanonical. Avoiding _taxonlabel_set_matched_label_id() should fix the slowdown that occurs when it's used on large tables.

5930 11/01/2012 06:48 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonIsCanonical: Moved then=0 into non-identifying _if statement attributes

5929 11/01/2012 06:41 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped taxonIsCanonical

5928 11/01/2012 06:41 AM Aaron Marcuse-Kubitza

bin/map: map_rows(): map_table(): Fixed bug where metadata values were being removed prematurely, by passing them through

5927 11/01/2012 06:40 AM Aaron Marcuse-Kubitza

bin/map: map_rows(): Fixed bug where metadata values were being passed to functions that expected columns, by placing them directly in the XML import tree and then removing them from the mappings

5926 11/01/2012 05:51 AM Aaron Marcuse-Kubitza

input.Makefile: Maps validation: %/new_terms.csv: Filter out metadata values, which are not new terms even though they are in the same map column as the input columns

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