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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8943 over 11 years Aaron Marcuse-Kubitza bin/my2pg: support $sql_ascii mode, where varbi...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9434 over 11 years Aaron Marcuse-Kubitza inputs/GBIF/raw_occurrence_record/run: dynamica...
  lib 9443 over 11 years Aaron Marcuse-Kubitza lib/sh/util.sh: sed: use case statement instead...
  mappings 9415 over 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: place.geovalid: added latL...
  planning 9403 over 11 years Aaron Marcuse-Kubitza added planning/workflow/validation/GeoDistKM.sq...
  schemas 9416 over 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: cultivated_family_location...
  web 9389 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 21.3 KB 9401 over 11 years Aaron Marcuse-Kubitza /README.TXT: Full database import: before runni...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9443 05/17/2013 02:55 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: sed: use case statement instead of test to determine flag letter, to easily allow matching multiple `uname` OSes or adding additional flag letters

9442 05/17/2013 02:46 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: die(): documented that its msg can use $?, because it has not yet been overridden by another command

9441 05/17/2013 02:45 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: die_e(): use die(), which performs the necessary save_e/rethrow. this requires using $? instead of $e for the exit status, because $e has not yet been set.

9440 05/17/2013 02:42 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: inlined log_e() into die_e() because that's the only place it's used

9439 05/17/2013 02:37 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: command(): print "command exited with error" message using new die_e() if command returns false. this requires removing manual die_e()/log_e() calls elsewhere.

9438 05/17/2013 02:34 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: command(): moved increase of indent inside () so that error-handling statements after () will use the outer log_level

9437 05/17/2013 02:31 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added die_e(), which logs that a command exited with an error

9436 05/17/2013 02:18 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: command(): determine redirections before echoing the command so they can be logged along with the command, instead of as separate exec statements. (these had a higher log_level to avoid cluttering the output with `exec` lines, which usually suppressed the redirections completely.) inline the command__set_fds() nested func so the redirections are all in one place.

9435 05/17/2013 01:54 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: use simpler `if can_log; then indent; fi` instead of `can_log && indent || true`. however, the `&& indent || true` syntax is still required in aliases such as echo_func which need to allow prefixing the command with a wrapper command or kw param assignments.

9434 05/16/2013 09:28 PM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: dynamically generate herbaria_filter.csv_ from herbaria.ih in new target herbaria_filter.csv_/make()

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