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| Revision:
Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 9496 over 11 years Aaron Marcuse-Kubitza added backups/*.md5
  bin 9869 over 11 years Aaron Marcuse-Kubitza bugfix: bin/make: use verbosity_compat because ...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9880 over 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: $(dontImport): also supp...
  lib 9879 over 11 years Aaron Marcuse-Kubitza bugfix: lib/sh/local.sh: removed make() overrid...
  mappings 9459 over 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: place.geo...
  planning 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  schemas 9859 over 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: added _filter_genus()
  web 9854 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: use simpler .rel() instead of `. "$...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.4 KB 9742 over 11 years Aaron Marcuse-Kubitza /Makefile: new config target (part of install):...
README.TXT 22.8 KB 9532 over 11 years Aaron Marcuse-Kubitza bugfix: README.TXT: Full database import: scree...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 390 Bytes 9854 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: use simpler .rel() instead of `. "$...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9880 06/12/2013 10:45 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: $(dontImport): also support putting a _no_import file at the top level in the datasource to exclude the entire datasource

9879 06/12/2013 10:30 AM Aaron Marcuse-Kubitza

bugfix: lib/sh/local.sh: removed make() override, which is no longer needed now that its operations are performed by verbosity_compat(), and which caused errors by setting $verbosity to the invalid value ""

9878 06/12/2013 10:28 AM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: verbosity_compat(): always use default verbosity (`unset verbosity`) when verbosity == 1, regardless of whether the caller has set $verbosity to the special value "", because $verbosity is supposed to be an integer field and "" is not supported by most functions that use $verbosity. in cases where a util.sh script is invoked, it will set $verbosity back to the default value 1, so this will function as before for util.sh scripts and fix $verbosity for scripts that use a different verbosity system.

9877 06/12/2013 10:05 AM Aaron Marcuse-Kubitza

added inputs/GBIF/raw_occurrence_record_plants/table.tsv.md5

9876 06/12/2013 09:51 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record_plants/test.xml.ref: regenerated. updated for new staging table input columns, which are now the same as the output columns.

9875 06/12/2013 09:41 AM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: %/VegBIEN.csv: use header from map.csv instead of the new columns, so that source.shortname is set to GBIF instead of VegCore

9874 06/12/2013 09:24 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: %/VegBIEN.csv: when a runscript is available, instead map the output columns of map.csv to VegBIEN, because the columns have been renamed in the staging table

9873 06/12/2013 08:32 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record_plants/VegBIEN.csv: regenerated, which adds row_num input col

9872 06/12/2013 08:16 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: echo_func(): check can_log at beginning of function, so that the resource-intensive func_loc (which calls `readlink -f`) does not need to be called if echo_cmd would not log anything at the current verbosity

9871 06/12/2013 08:02 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: echo_func(): removed no longer used $minor flag. use `clog++... echo_func` instead.

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