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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10031 over 11 years Aaron Marcuse-Kubitza bugfix: backups/.rsync_filter.download: need to...
  bin 10077 over 11 years Aaron Marcuse-Kubitza bin/src_map: support custom (or no) new_term_pr...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10109 over 11 years Aaron Marcuse-Kubitza empty inputs/*/import_order.txt: added subdirs ...
  lib 10097 over 11 years Aaron Marcuse-Kubitza bugfix: lib/runscripts/datasrc_dir.run, subdir....
  mappings 9882 over 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: genus->taxonlabel...
  planning 10079 over 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: added Relo...
  schemas 10071 over 11 years Aaron Marcuse-Kubitza schemas/util.sql: try_create(): also ignore wro...
  web 10099 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.5 KB 9917 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres-Linux: phpPgAdmin: ...
README.TXT 23.2 KB 10093 over 11 years Aaron Marcuse-Kubitza bugfix: /README.TXT: Maintenance: syncing ~/bie...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10109 06/28/2013 04:54 PM Aaron Marcuse-Kubitza

empty inputs/*/import_order.txt: added subdirs in the order they are used by inputs/input.Makefile, by running make on the inputs to auto-populate import_order.txt. import_order.txt is needed by the runscripts to run the right set of subdirs in the right order.

10108 06/28/2013 04:48 PM Aaron Marcuse-Kubitza

added inputs/.TNRS/grants.sql, with statements to provide SELECT access to bien_read. these statements must be in grants.sql to avoid them being filtered out by pg_dump_limit.

10107 06/28/2013 04:47 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: added support for separate grants.sql file, which may contain GRANT statements that would normally be filtered out by pg_dump_limit

10106 06/28/2013 04:44 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: sql/install: added $debug option to run the *.sql import verbosely, to display which statements are being run. this should only be used for SQL files that use COPY FROM to import data, to avoid echoing pages of insert statements.

10105 06/28/2013 01:53 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: keep $(sortFile) up-to-date: use sort_file_updated=1 flag to indicate that import_order.txt has already been checked, so that recursive invocations of make don't need to recheck it. also use this flag instead of an explicit $(MAKECMDGOALS) list to prevent the $(sortFile) check from being infinite-recursively reinvoked when input.Makefile is read as part of the $(sortFile) check itself.

10104 06/28/2013 01:38 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: keep import_order.txt up-to-date by running `make $(sortFile)` each time make is run. this ensures that new datasources always have import_order.txt populated when make is first run. eventually, $(tables) can be always set to $(allTables) so that this auto-updating can also be used to ensure that new subdirs added by the user always make it into import_order.txt (so that they will be included in the subdirs that get remade, etc.). import_order.txt is primarily for specifying the order of the subdirs, but some datasources also use it to filter out subdirs, so it can't yet be always updated to include the full list of subdirs. however, the filter-out usage should no longer be necessary after the switch to new-style import.

10103 06/28/2013 12:58 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: added $(filter_make), used to filter the output of embedded $(shell make ...) invocations

10102 06/28/2013 11:39 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: $(sortFile): use $(filter-out)->then instead of $(filter)->else for clarity

10101 06/28/2013 11:21 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: added $(sortFile) (import_order.txt) target which adds any missing tables to import_order.txt

10100 06/28/2013 11:03 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: added list_tables to print $(tables) for use in populating import_order.txt

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