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1 11 aaronmk
# Database access
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import copy
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import operator
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import re
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import warnings
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import exc
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import dicts
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import iters
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import lists
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from Proxy import Proxy
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import rand
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import sql_gen
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import strings
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import util
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##### Exceptions
19
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def get_cur_query(cur, input_query=None, input_params=None):
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    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
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25
    if raw_query != None: return raw_query
26
    else: return repr(input_query)+' % '+repr(input_params)
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def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
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class DbException(exc.ExceptionWithCause):
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    def __init__(self, msg, cause=None, cur=None):
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        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35 14 aaronmk
        if cur != None: _add_cursor_info(self, cur)
36
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class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
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        DbException.__init__(self, 'for name: '+str(name), cause)
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        self.name = name
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class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self,
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            'for name: '+str(name)+'; value: '+strings.ustr(value), cause)
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        self.name = name
47
        self.value = value
48
49 468 aaronmk
class ExceptionWithColumns(DbException):
50
    def __init__(self, cols, cause=None):
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        DbException.__init__(self, 'for columns: '+(', '.join(cols)), cause)
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        self.cols = cols
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class NameException(DbException): pass
55
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class DuplicateKeyException(ExceptionWithColumns): pass
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class NullValueException(ExceptionWithColumns): pass
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class FunctionValueException(ExceptionWithNameValue): pass
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class DuplicateTableException(ExceptionWithName): pass
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class DuplicateFunctionException(ExceptionWithName): pass
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class EmptyRowException(DbException): pass
67
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##### Warnings
69
70
class DbWarning(UserWarning): pass
71
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##### Result retrieval
73
74
def col_names(cur): return (col[0] for col in cur.description)
75
76
def rows(cur): return iter(lambda: cur.fetchone(), None)
77
78
def consume_rows(cur):
79
    '''Used to fetch all rows so result will be cached'''
80
    iters.consume_iter(rows(cur))
81
82
def next_row(cur): return rows(cur).next()
83
84
def row(cur):
85
    row_ = next_row(cur)
86
    consume_rows(cur)
87
    return row_
88
89
def next_value(cur): return next_row(cur)[0]
90
91
def value(cur): return row(cur)[0]
92
93
def values(cur): return iters.func_iter(lambda: next_value(cur))
94
95
def value_or_none(cur):
96
    try: return value(cur)
97
    except StopIteration: return None
98
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##### Input validation
100
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def clean_name(name): return re.sub(r'\W', r'', name).lower()
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def check_name(name):
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    if re.search(r'\W', name) != None: raise NameException('Name "'+name
105
        +'" may contain only alphanumeric characters and _')
106
107
def esc_name_by_module(module, name, ignore_case=False):
108
    if module == 'psycopg2':
109
        if ignore_case:
110
            # Don't enclose in quotes because this disables case-insensitivity
111
            check_name(name)
112
            return name
113
        else: quote = '"'
114
    elif module == 'MySQLdb': quote = '`'
115
    else: raise NotImplementedError("Can't escape name for "+module+' database')
116
    return quote + name.replace(quote, '') + quote
117
118
def esc_name_by_engine(engine, name, **kw_args):
119
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
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def esc_name(db, name, **kw_args):
122
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
123
124
def qual_name(db, schema, table):
125
    def esc_name_(name): return esc_name(db, name)
126
    table = esc_name_(table)
127
    if schema != None: return esc_name_(schema)+'.'+table
128
    else: return table
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##### Database connections
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db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
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db_engines = {
135
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
136
    'PostgreSQL': ('psycopg2', {}),
137
}
138
139
DatabaseErrors_set = set([DbException])
140
DatabaseErrors = tuple(DatabaseErrors_set)
141
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def _add_module(module):
143
    DatabaseErrors_set.add(module.DatabaseError)
144
    global DatabaseErrors
145
    DatabaseErrors = tuple(DatabaseErrors_set)
146
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def db_config_str(db_config):
148
    return db_config['engine']+' database '+db_config['database']
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def _query_lookup(query, params): return (query, dicts.make_hashable(params))
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log_debug_none = lambda msg: None
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class DbConn:
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    def __init__(self, db_config, serializable=True, autocommit=False,
156
        caching=True, log_debug=log_debug_none):
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        self.db_config = db_config
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        self.serializable = serializable
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        self.autocommit = autocommit
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        self.caching = caching
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        self.log_debug = log_debug
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        self.debug = log_debug != log_debug_none
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        self.__db = None
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        self.query_results = {}
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        self._savepoint = 0
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168
    def __getattr__(self, name):
169
        if name == '__dict__': raise Exception('getting __dict__')
170
        if name == 'db': return self._db()
171
        else: raise AttributeError()
172
173
    def __getstate__(self):
174
        state = copy.copy(self.__dict__) # shallow copy
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        state['log_debug'] = None # don't pickle the debug callback
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        state['_DbConn__db'] = None # don't pickle the connection
177
        return state
178
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    def connected(self): return self.__db != None
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    def _db(self):
182
        if self.__db == None:
183
            # Process db_config
184
            db_config = self.db_config.copy() # don't modify input!
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            schemas = db_config.pop('schemas', None)
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            module_name, mappings = db_engines[db_config.pop('engine')]
187
            module = __import__(module_name)
188
            _add_module(module)
189
            for orig, new in mappings.iteritems():
190
                try: util.rename_key(db_config, orig, new)
191
                except KeyError: pass
192
193
            # Connect
194
            self.__db = module.connect(**db_config)
195
196
            # Configure connection
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            if self.serializable and not self.autocommit: run_raw_query(self,
198
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
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            if schemas != None:
200
                schemas_ = ''.join((esc_name(self, s)+', '
201
                    for s in schemas.split(',')))
202
                run_raw_query(self, "SELECT set_config('search_path', \
203
%s || current_setting('search_path'), false)", [schemas_])
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        return self.__db
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    class DbCursor(Proxy):
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        def __init__(self, outer):
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            Proxy.__init__(self, outer.db.cursor())
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            self.outer = outer
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            self.query_results = outer.query_results
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            self.query_lookup = None
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            self.result = []
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        def execute(self, query, params=None):
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            self._is_insert = query.upper().find('INSERT') >= 0
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            self.query_lookup = _query_lookup(query, params)
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            try:
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                try:
220
                    return_value = self.inner.execute(query, params)
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                    self.outer.do_autocommit()
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                finally: self.query = get_cur_query(self.inner)
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            except Exception, e:
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                _add_cursor_info(e, self, query, params)
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                self.result = e # cache the exception as the result
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                self._cache_result()
227
                raise
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            # Fetch all rows so result will be cached
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            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
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            return return_value
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        def fetchone(self):
233
            row = self.inner.fetchone()
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            if row != None: self.result.append(row)
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            # otherwise, fetched all rows
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            else: self._cache_result()
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            return row
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        def _cache_result(self):
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            # For inserts, only cache exceptions since inserts are not
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            # idempotent, but an invalid insert will always be invalid
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            if self.query_results != None and (not self._is_insert
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                or isinstance(self.result, Exception)):
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                assert self.query_lookup != None
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                self.query_results[self.query_lookup] = self.CacheCursor(
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                    util.dict_subset(dicts.AttrsDictView(self),
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                    ['query', 'result', 'rowcount', 'description']))
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        class CacheCursor:
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            def __init__(self, cached_result): self.__dict__ = cached_result
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            def execute(self, *args, **kw_args):
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                if isinstance(self.result, Exception): raise self.result
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                # otherwise, result is a rows list
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                self.iter = iter(self.result)
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            def fetchone(self):
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                try: return self.iter.next()
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                except StopIteration: return None
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    def esc_value(self, value):
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        module = util.root_module(self.db)
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        if module == 'psycopg2': return self.db.cursor().mogrify('%s', [value])
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        elif module == 'MySQLdb':
266
            import _mysql
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            return _mysql.escape_string(value)
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        else: raise NotImplementedError("Can't escape value for "+module
269
            +' database')
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    def run_query(self, query, params=None, cacheable=False):
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        '''Translates known DB errors to typed exceptions:
273
        See self.DbCursor.execute().'''
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        assert query != None
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        if not self.caching: cacheable = False
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        used_cache = False
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        try:
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            # Get cursor
280
            if cacheable:
281
                query_lookup = _query_lookup(query, params)
282
                try:
283
                    cur = self.query_results[query_lookup]
284
                    used_cache = True
285
                except KeyError: cur = self.DbCursor(self)
286
            else: cur = self.db.cursor()
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            # Run query
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            cur.execute(query, params)
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        finally:
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            if self.debug: # only compute msg if needed
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                if used_cache: cache_status = 'Cache hit'
293
                elif cacheable: cache_status = 'Cache miss'
294
                else: cache_status = 'Non-cacheable'
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                self.log_debug(cache_status+': '
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                    +strings.one_line(str(get_cur_query(cur, query, params))))
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298
        return cur
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300
    def is_cached(self, query, params=None):
301
        return _query_lookup(query, params) in self.query_results
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303
    def with_savepoint(self, func):
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        savepoint = 'level_'+str(self._savepoint)
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        self.run_query('SAVEPOINT '+savepoint)
306
        self._savepoint += 1
307
        try:
308
            try: return_val = func()
309
            finally:
310
                self._savepoint -= 1
311
                assert self._savepoint >= 0
312
        except:
313
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint)
314
            raise
315
        else:
316
            self.run_query('RELEASE SAVEPOINT '+savepoint)
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            self.do_autocommit()
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            return return_val
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320
    def do_autocommit(self):
321
        '''Autocommits if outside savepoint'''
322
        assert self._savepoint >= 0
323
        if self.autocommit and self._savepoint == 0:
324
            self.log_debug('Autocommiting')
325
            self.db.commit()
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connect = DbConn
328
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##### Querying
330
331 1894 aaronmk
def run_raw_query(db, *args, **kw_args):
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    '''For params, see DbConn.run_query()'''
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    return db.run_query(*args, **kw_args)
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def mogrify(db, query, params):
336
    module = util.root_module(db.db)
337
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
338
    else: raise NotImplementedError("Can't mogrify query for "+module+
339
        ' database')
340
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##### Recoverable querying
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def with_savepoint(db, func): return db.with_savepoint(func)
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def run_query(db, query, params=None, recover=None, cacheable=False):
346 830 aaronmk
    if recover == None: recover = False
347
348 2148 aaronmk
    try:
349
        def run(): return run_raw_query(db, query, params, cacheable)
350
        if recover and not db.is_cached(query, params):
351
            return with_savepoint(db, run)
352
        else: return run() # don't need savepoint if cached
353
    except Exception, e:
354
        if not recover: raise # need savepoint to run index_cols()
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        msg = exc.str_(e)
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357 2148 aaronmk
        match = re.search(r'duplicate key value violates unique constraint '
358
            r'"((_?[^\W_]+)_[^"]+)"', msg)
359
        if match:
360
            constraint, table = match.groups()
361
            try: cols = index_cols(db, table, constraint)
362
            except NotImplementedError: raise e
363
            else: raise DuplicateKeyException(cols, e)
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        match = re.search(r'null value in column "(\w+)" violates not-null '
366 2239 aaronmk
            r'constraint', msg)
367 2148 aaronmk
        if match: raise NullValueException([match.group(1)], e)
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        match = re.search(r'invalid input (?:syntax|value)\b.*: "(.+)"\n'
370 2242 aaronmk
            r'(?:(?s).*)\bfunction "(\w+)".*\bat assignment', msg)
371 2240 aaronmk
        if match:
372 2247 aaronmk
            raise FunctionValueException(match.group(2),
373
                strings.to_unicode(match.group(1)), e)
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375 2148 aaronmk
        match = re.search(r'relation "(\w+)" already exists', msg)
376
        if match: raise DuplicateTableException(match.group(1), e)
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        match = re.search(r'function "(\w+)" already exists', msg)
379
        if match: raise DuplicateFunctionException(match.group(1), e)
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381 2148 aaronmk
        raise # no specific exception raised
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##### Basic queries
384
385 2153 aaronmk
def next_version(name):
386
    '''Prepends the version # so it won't be removed if the name is truncated'''
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    version = 1 # first existing name was version 0
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    match = re.match(r'^v(\d+)_(.*)$', name)
389
    if match:
390
        version = int(match.group(1))+1
391
        name = match.group(2)
392
    return 'v'+str(version)+'_'+name
393
394 2151 aaronmk
def run_query_into(db, query, params, into_ref=None, *args, **kw_args):
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    '''Outputs a query to a temp table.
396
    For params, see run_query().
397
    '''
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    if into_ref == None: return run_query(db, query, params, *args, **kw_args)
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    else: # place rows in temp table
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        check_name(into_ref[0])
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        kw_args['recover'] = True
402
        while True:
403
            try:
404 2194 aaronmk
                create_query = 'CREATE'
405
                if not db.debug: create_query += ' TEMP'
406
                create_query += ' TABLE '+into_ref[0]+' AS '+query
407
408
                return run_query(db, create_query, params, *args, **kw_args)
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                    # CREATE TABLE AS sets rowcount to # rows in query
410
            except DuplicateTableException, e:
411
                into_ref[0] = next_version(into_ref[0])
412
                # try again with next version of name
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order_by_pkey = object() # tells mk_select() to order by the pkey
415
416 2127 aaronmk
join_using = object() # tells mk_select() to join the column with USING
417
418 2199 aaronmk
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
419
420 2233 aaronmk
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
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    start=None, order_by=order_by_pkey, table_is_esc=False, default_table=None):
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    '''
423 2121 aaronmk
    @param tables The single table to select from, or a list of tables to join
424 2187 aaronmk
        together: [table0, (table1, joins), ...]
425
426
        joins has the format: dict(right_col=left_col, ...)
427
        * if left_col is join_using, left_col is set to right_col
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    @param fields Use None to select all fields in the table
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    @param conds WHERE conditions: dict(compare_left_side=compare_right_side):
430
        * compare_left_side: Code|str (for col name)
431
        * compare_right_side: ValueCond|literal value
432 2199 aaronmk
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
433
        use all columns
434 1981 aaronmk
    @param table_is_esc Whether the table name has already been escaped
435 2054 aaronmk
    @return tuple(query, params)
436 1981 aaronmk
    '''
437 2060 aaronmk
    def esc_name_(name): return esc_name(db, name)
438 2058 aaronmk
439 2121 aaronmk
    if not lists.is_seq(tables): tables = [tables]
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    tables = list(tables) # don't modify input! (list() copies input)
441 2121 aaronmk
    table0 = tables.pop(0) # first table is separate
442
443 1135 aaronmk
    if conds == None: conds = {}
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    assert limit == None or type(limit) == int
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    assert start == None or type(start) == int
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    if order_by is order_by_pkey:
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        order_by = pkey(db, table0, recover=True, table_is_esc=table_is_esc)
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    table0 = sql_gen.table2sql_gen(table0, table_is_esc)
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450 2056 aaronmk
    params = []
451
452 2227 aaronmk
    def parse_col(field):
453 2056 aaronmk
        '''Parses fields'''
454 2227 aaronmk
        return sql_gen.value2sql_gen(field, default_table, table_is_esc,
455
            assume_col=True).to_str(db)
456 11 aaronmk
    def cond(entry):
457 2056 aaronmk
        '''Parses conditions'''
458 2217 aaronmk
        left, right = entry
459 2226 aaronmk
        return sql_gen.cond2sql_gen(right).to_str(db, sql_gen.col2sql_gen(left))
460 2056 aaronmk
461 2200 aaronmk
    query = 'SELECT'
462
463
    # DISTINCT ON columns
464 2233 aaronmk
    if distinct_on != []:
465 2200 aaronmk
        query += ' DISTINCT'
466 2254 aaronmk
        if distinct_on is not distinct_on_all:
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            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
468
469
    # Columns
470
    query += ' '
471 1135 aaronmk
    if fields == None: query += '*'
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    else: query += ', '.join(map(parse_col, fields))
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474
    # Main table
475 2271 aaronmk
    query += ' FROM '+table0.to_str(db)
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    # Add joins
478 2263 aaronmk
    tables = [sql_gen.join2sql_gen(v, table_is_esc) for v in tables]
479 2271 aaronmk
    left_table = table0
480 2263 aaronmk
    for join_ in tables:
481
        table = join_.table
482
        joins = join_.mapping
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484 2238 aaronmk
        left_join = False
485 2187 aaronmk
486 2238 aaronmk
        # Parse special values
487 2267 aaronmk
        if join_.type_ is sql_gen.filter_out:
488
            left_join = True
489
            table_pkey = pkey(db, table.to_str(db), table_is_esc=True)
490
            conds[sql_gen.Col(table_pkey, table)] = None # filter by no match
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492 2122 aaronmk
        def join(entry):
493 2127 aaronmk
            '''Parses non-USING joins'''
494 2124 aaronmk
            right_col, left_col = entry
495 2173 aaronmk
496 2179 aaronmk
            # Parse special values
497 2176 aaronmk
            if left_col == None: left_col = (left_col,)
498
                # for None values, tuple is optional
499 2254 aaronmk
            elif left_col is join_using: left_col = right_col
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501 2263 aaronmk
            return cond((sql_gen.col2sql_gen(right_col, table),
502
                sql_gen.cond2sql_gen(left_col, left_table, assume_col=True)))
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504 2187 aaronmk
        # Create join condition and determine join type
505 2254 aaronmk
        if reduce(operator.and_, (v is join_using for v in joins.itervalues())):
506 2179 aaronmk
            # all cols w/ USING, so can use simpler USING syntax
507 2187 aaronmk
            join_cond = 'USING ('+(', '.join(joins.iterkeys()))+')'
508
        else: join_cond = 'ON '+(' AND '.join(map(join, joins.iteritems())))
509 2127 aaronmk
510 2187 aaronmk
        # Create join
511 2238 aaronmk
        if left_join: query += ' LEFT'
512 2263 aaronmk
        query += ' JOIN '+table.to_str(db)+' '+join_cond
513 2187 aaronmk
514 2122 aaronmk
        left_table = table
515
516 865 aaronmk
    missing = True
517 89 aaronmk
    if conds != {}:
518 2122 aaronmk
        query += ' WHERE '+(' AND '.join(map(cond, conds.iteritems())))
519 2056 aaronmk
        params += conds.values()
520 865 aaronmk
        missing = False
521 2227 aaronmk
    if order_by != None:
522
        query += ' ORDER BY '+sql_gen.col2sql_gen(order_by, table0,
523
            table_is_esc).to_str(db)
524 865 aaronmk
    if limit != None: query += ' LIMIT '+str(limit); missing = False
525
    if start != None:
526
        if start != 0: query += ' OFFSET '+str(start)
527
        missing = False
528
    if missing: warnings.warn(DbWarning(
529
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
530
531 2056 aaronmk
    return (query, params)
532 11 aaronmk
533 2054 aaronmk
def select(db, *args, **kw_args):
534
    '''For params, see mk_select() and run_query()'''
535
    recover = kw_args.pop('recover', None)
536
    cacheable = kw_args.pop('cacheable', True)
537
538
    query, params = mk_select(db, *args, **kw_args)
539
    return run_query(db, query, params, recover, cacheable)
540
541 2066 aaronmk
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
542 2070 aaronmk
    returning=None, embeddable=False, table_is_esc=False):
543 1960 aaronmk
    '''
544
    @param returning str|None An inserted column (such as pkey) to return
545 2070 aaronmk
    @param embeddable Whether the query should be embeddable as a nested SELECT.
546 2073 aaronmk
        Warning: If you set this and cacheable=True when the query is run, the
547
        query will be fully cached, not just if it raises an exception.
548 1960 aaronmk
    @param table_is_esc Whether the table name has already been escaped
549
    '''
550 2063 aaronmk
    if select_query == None: select_query = 'DEFAULT VALUES'
551
    if cols == []: cols = None # no cols (all defaults) = unknown col names
552 2274 aaronmk
    table = sql_gen.table2sql_gen(table, table_is_esc).to_str(db)
553 2063 aaronmk
554
    # Build query
555
    query = 'INSERT INTO '+table
556
    if cols != None:
557
        map(check_name, cols)
558
        query += ' ('+', '.join(cols)+')'
559
    query += ' '+select_query
560
561
    if returning != None:
562
        check_name(returning)
563
        query += ' RETURNING '+returning
564
565 2070 aaronmk
    if embeddable:
566
        # Create function
567 2189 aaronmk
        function_name = '_'.join(map(clean_name, ['insert', table] + cols))
568 2070 aaronmk
        return_type = 'SETOF '+table+'.'+returning+'%TYPE'
569 2189 aaronmk
        while True:
570
            try:
571 2194 aaronmk
                function = function_name
572
                if not db.debug: function = 'pg_temp.'+function
573
574 2189 aaronmk
                function_query = '''\
575
CREATE FUNCTION '''+function+'''() RETURNS '''+return_type+'''
576 2070 aaronmk
    LANGUAGE sql
577
    AS $$'''+mogrify(db, query, params)+''';$$;
578
'''
579 2189 aaronmk
                run_query(db, function_query, recover=True, cacheable=True)
580
                break # this version was successful
581
            except DuplicateFunctionException, e:
582
                function_name = next_version(function_name)
583
                # try again with next version of name
584 2070 aaronmk
585
        # Return query that uses function
586 2271 aaronmk
        return mk_select(db, sql_gen.CustomCode(function+'() AS f ('+returning
587
            +')'), start=0, order_by=None) # AS clause requires function alias
588 2070 aaronmk
589 2066 aaronmk
    return (query, params)
590
591
def insert_select(db, *args, **kw_args):
592 2085 aaronmk
    '''For params, see mk_insert_select() and run_query_into()
593 2152 aaronmk
    @param into_ref List with name of temp table to place RETURNING values in
594 2072 aaronmk
    '''
595 2151 aaronmk
    into_ref = kw_args.pop('into_ref', None)
596
    if into_ref != None: kw_args['embeddable'] = True
597 2066 aaronmk
    recover = kw_args.pop('recover', None)
598
    cacheable = kw_args.pop('cacheable', True)
599
600
    query, params = mk_insert_select(db, *args, **kw_args)
601 2153 aaronmk
    return run_query_into(db, query, params, into_ref, recover=recover,
602
        cacheable=cacheable)
603 2063 aaronmk
604 2066 aaronmk
default = object() # tells insert() to use the default value for a column
605
606 2063 aaronmk
def insert(db, table, row, *args, **kw_args):
607 2085 aaronmk
    '''For params, see insert_select()'''
608 1960 aaronmk
    if lists.is_seq(row): cols = None
609
    else:
610
        cols = row.keys()
611
        row = row.values()
612
    row = list(row) # ensure that "!= []" works
613
614 1961 aaronmk
    # Check for special values
615
    labels = []
616
    values = []
617
    for value in row:
618 2254 aaronmk
        if value is default: labels.append('DEFAULT')
619 1961 aaronmk
        else:
620
            labels.append('%s')
621
            values.append(value)
622
623
    # Build query
624 2063 aaronmk
    if values != []: query = ' VALUES ('+(', '.join(labels))+')'
625
    else: query = None
626 1554 aaronmk
627 2064 aaronmk
    return insert_select(db, table, cols, query, values, *args, **kw_args)
628 11 aaronmk
629 135 aaronmk
def last_insert_id(db):
630 1849 aaronmk
    module = util.root_module(db.db)
631 135 aaronmk
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
632
    elif module == 'MySQLdb': return db.insert_id()
633
    else: return None
634 13 aaronmk
635 1968 aaronmk
def truncate(db, table, schema='public'):
636
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
637 832 aaronmk
638
##### Database structure queries
639
640 2084 aaronmk
def pkey(db, table, recover=None, table_is_esc=False):
641 832 aaronmk
    '''Assumed to be first column in table'''
642 2120 aaronmk
    return col_names(select(db, table, limit=0, order_by=None, recover=recover,
643 2084 aaronmk
        table_is_esc=table_is_esc)).next()
644 832 aaronmk
645 853 aaronmk
def index_cols(db, table, index):
646
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
647
    automatically created. When you don't know whether something is a UNIQUE
648
    constraint or a UNIQUE index, use this function.'''
649
    check_name(table)
650
    check_name(index)
651 1909 aaronmk
    module = util.root_module(db.db)
652
    if module == 'psycopg2':
653
        return list(values(run_query(db, '''\
654 853 aaronmk
SELECT attname
655 866 aaronmk
FROM
656
(
657
        SELECT attnum, attname
658
        FROM pg_index
659
        JOIN pg_class index ON index.oid = indexrelid
660
        JOIN pg_class table_ ON table_.oid = indrelid
661
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
662
        WHERE
663
            table_.relname = %(table)s
664
            AND index.relname = %(index)s
665
    UNION
666
        SELECT attnum, attname
667
        FROM
668
        (
669
            SELECT
670
                indrelid
671
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
672
                    AS indkey
673
            FROM pg_index
674
            JOIN pg_class index ON index.oid = indexrelid
675
            JOIN pg_class table_ ON table_.oid = indrelid
676
            WHERE
677
                table_.relname = %(table)s
678
                AND index.relname = %(index)s
679
        ) s
680
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
681
) s
682 853 aaronmk
ORDER BY attnum
683
''',
684 1909 aaronmk
            {'table': table, 'index': index}, cacheable=True)))
685
    else: raise NotImplementedError("Can't list index columns for "+module+
686
        ' database')
687 853 aaronmk
688 464 aaronmk
def constraint_cols(db, table, constraint):
689
    check_name(table)
690
    check_name(constraint)
691 1849 aaronmk
    module = util.root_module(db.db)
692 464 aaronmk
    if module == 'psycopg2':
693
        return list(values(run_query(db, '''\
694
SELECT attname
695
FROM pg_constraint
696
JOIN pg_class ON pg_class.oid = conrelid
697
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
698
WHERE
699
    relname = %(table)s
700
    AND conname = %(constraint)s
701
ORDER BY attnum
702
''',
703
            {'table': table, 'constraint': constraint})))
704
    else: raise NotImplementedError("Can't list constraint columns for "+module+
705
        ' database')
706
707 2096 aaronmk
row_num_col = '_row_num'
708
709 2086 aaronmk
def add_row_num(db, table):
710 2117 aaronmk
    '''Adds a row number column to a table. Its name is in row_num_col. It will
711
    be the primary key.'''
712 2086 aaronmk
    check_name(table)
713 2096 aaronmk
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
714 2117 aaronmk
        +' serial NOT NULL PRIMARY KEY')
715 2086 aaronmk
716 1968 aaronmk
def tables(db, schema='public', table_like='%'):
717 1849 aaronmk
    module = util.root_module(db.db)
718 1968 aaronmk
    params = {'schema': schema, 'table_like': table_like}
719 832 aaronmk
    if module == 'psycopg2':
720 1968 aaronmk
        return values(run_query(db, '''\
721
SELECT tablename
722
FROM pg_tables
723
WHERE
724
    schemaname = %(schema)s
725
    AND tablename LIKE %(table_like)s
726
ORDER BY tablename
727
''',
728
            params, cacheable=True))
729
    elif module == 'MySQLdb':
730
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
731
            cacheable=True))
732 832 aaronmk
    else: raise NotImplementedError("Can't list tables for "+module+' database')
733 830 aaronmk
734 833 aaronmk
##### Database management
735
736 1968 aaronmk
def empty_db(db, schema='public', **kw_args):
737
    '''For kw_args, see tables()'''
738
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
739 833 aaronmk
740 832 aaronmk
##### Heuristic queries
741
742 2104 aaronmk
def put(db, table, row, pkey_=None, row_ct_ref=None):
743 1554 aaronmk
    '''Recovers from errors.
744 2077 aaronmk
    Only works under PostgreSQL (uses INSERT RETURNING).
745
    '''
746 2104 aaronmk
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
747
748 471 aaronmk
    try:
749 2149 aaronmk
        cur = insert(db, table, row, pkey_, recover=True)
750 1554 aaronmk
        if row_ct_ref != None and cur.rowcount >= 0:
751
            row_ct_ref[0] += cur.rowcount
752
        return value(cur)
753 471 aaronmk
    except DuplicateKeyException, e:
754 2104 aaronmk
        return value(select(db, table, [pkey_],
755 1069 aaronmk
            util.dict_subset_right_join(row, e.cols), recover=True))
756 471 aaronmk
757 473 aaronmk
def get(db, table, row, pkey, row_ct_ref=None, create=False):
758 830 aaronmk
    '''Recovers from errors'''
759 2209 aaronmk
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
760 14 aaronmk
    except StopIteration:
761 40 aaronmk
        if not create: raise
762 471 aaronmk
        return put(db, table, row, pkey, row_ct_ref) # insert new row
763 2078 aaronmk
764 2134 aaronmk
def put_table(db, out_table, in_tables, mapping, limit=None, start=0,
765
    row_ct_ref=None, table_is_esc=False):
766 2078 aaronmk
    '''Recovers from errors.
767
    Only works under PostgreSQL (uses INSERT RETURNING).
768 2131 aaronmk
    @param in_tables The main input table to select from, followed by a list of
769
        tables to join with it using the main input table's pkey
770 2133 aaronmk
    @return (table, col) Where the pkeys (from INSERT RETURNING) are made
771 2078 aaronmk
        available
772
    '''
773 2251 aaronmk
    temp_prefix = clean_name(out_table)
774
    pkeys_ref = [temp_prefix+'_pkeys']
775 2131 aaronmk
776 2132 aaronmk
    # Join together input tables
777 2131 aaronmk
    in_tables = in_tables[:] # don't modify input!
778
    in_tables0 = in_tables.pop(0) # first table is separate
779
    in_pkey = pkey(db, in_tables0, recover=True, table_is_esc=table_is_esc)
780 2236 aaronmk
    in_pkey_col = sql_gen.col2sql_gen(in_pkey, in_tables0, table_is_esc)
781 2178 aaronmk
    insert_joins = [in_tables0]+[(t, {in_pkey: join_using}) for t in in_tables]
782 2131 aaronmk
783 2142 aaronmk
    out_pkey = pkey(db, out_table, recover=True, table_is_esc=table_is_esc)
784 2236 aaronmk
    out_pkey_col = sql_gen.col2sql_gen(out_pkey, out_table, table_is_esc)
785 2142 aaronmk
786 2236 aaronmk
    pkeys = [in_pkey, out_pkey]
787
    pkeys_cols = [in_pkey_col, out_pkey_col]
788
789 2201 aaronmk
    pkeys_table_exists_ref = [False]
790
    def run_query_into_pkeys(query, params):
791
        if pkeys_table_exists_ref[0]:
792 2236 aaronmk
            insert_select(db, pkeys_ref[0], pkeys, query, params)
793 2201 aaronmk
        else:
794
            run_query_into(db, query, params, into_ref=pkeys_ref)
795
            pkeys_table_exists_ref[0] = True
796
797 2208 aaronmk
    conds = {}
798 2233 aaronmk
    distinct_on = []
799 2207 aaronmk
    def mk_main_select(cols):
800 2208 aaronmk
        return mk_select(db, insert_joins, cols, conds, distinct_on,
801 2227 aaronmk
            order_by=None, limit=limit, start=start, table_is_esc=table_is_esc,
802
            default_table=in_tables0)
803 2132 aaronmk
804 2245 aaronmk
    def log_ignore(in_col, value):
805
        db.log_debug('Ignoring rows with '+in_col+' = '+value)
806
807 2206 aaronmk
    # Do inserts and selects
808 2257 aaronmk
    join_cols = {}
809
    filter_join_added = False
810 2251 aaronmk
    out_pkeys_ref = [temp_prefix+'_out_pkeys']
811 2252 aaronmk
    in_pkeys_ref = [temp_prefix+'_in_pkeys']
812 2206 aaronmk
    while True:
813
        try:
814 2257 aaronmk
            if join_cols != {}:
815
                select_joins = insert_joins + [(out_table, join_cols)]
816
                db.log_debug('Getting pkeys of already existing rows')
817
                run_query_into_pkeys(*mk_select(db, select_joins, pkeys_cols,
818
                    order_by=None, start=0, table_is_esc=table_is_esc))
819
820
                # Prepare to insert new rows
821
                input_join_cols = join_cols.values()
822
                distinct_on = filter(util.is_str, input_join_cols)
823
                if not filter_join_added:
824 2267 aaronmk
                    insert_joins.append(sql_gen.Join(pkeys_ref[0],
825
                        {in_pkey: in_pkey}, sql_gen.filter_out))
826 2257 aaronmk
                    filter_join_added = True
827
828 2253 aaronmk
            db.log_debug('Inserting new rows')
829 2206 aaronmk
            cur = insert_select(db, out_table, mapping.keys(),
830 2207 aaronmk
                *mk_main_select(mapping.values()), returning=out_pkey,
831 2206 aaronmk
                into_ref=out_pkeys_ref, recover=True, table_is_esc=table_is_esc)
832
            if row_ct_ref != None and cur.rowcount >= 0:
833
                row_ct_ref[0] += cur.rowcount
834
                add_row_num(db, out_pkeys_ref[0]) # for joining with input pkeys
835
836 2253 aaronmk
            db.log_debug('Getting input pkeys corresponding to rows in insert')
837 2207 aaronmk
            run_query_into(db, *mk_main_select([in_pkey]),
838
                into_ref=in_pkeys_ref)
839 2206 aaronmk
            add_row_num(db, in_pkeys_ref[0]) # for joining with output pkeys
840
841 2253 aaronmk
            db.log_debug('Joining together output and input pkeys')
842 2206 aaronmk
            run_query_into_pkeys(*mk_select(db, [in_pkeys_ref[0],
843 2236 aaronmk
                (out_pkeys_ref[0], {row_num_col: join_using})], pkeys, start=0))
844 2206 aaronmk
845
            break # insert successful
846
        except DuplicateKeyException, e:
847 2258 aaronmk
            old_join_cols = join_cols.copy()
848 2257 aaronmk
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
849 2245 aaronmk
            db.log_debug('Ignoring existing rows, comparing on '+str(join_cols))
850 2258 aaronmk
            assert join_cols != old_join_cols # avoid infinite loops
851 2206 aaronmk
            # rerun loop with additional constraints
852 2230 aaronmk
        except NullValueException, e:
853
            out_col, = e.cols
854
            try: in_col = mapping[out_col]
855
            except KeyError: # no mapping for missing col, so every row invalid
856 2245 aaronmk
                db.log_debug('Missing mapping for '+out_col)
857 2230 aaronmk
                run_query_into_pkeys(*mk_select(db, insert_joins,
858 2236 aaronmk
                    [in_pkey_col, sql_gen.NamedCode(out_pkey, None)],
859 2230 aaronmk
                    order_by=None, start=0, table_is_esc=table_is_esc))
860
                break
861
            else:
862 2245 aaronmk
                log_ignore(in_col, 'NULL')
863 2230 aaronmk
                conds[in_col] = sql_gen.CompareCond(None, '!=')
864
                # rerun loop with additional constraints
865 2243 aaronmk
        except FunctionValueException, e:
866
            assert e.name == sql_gen.unescape_table(out_table)
867
            out_col = 'value' # assume function param was named "value"
868
            in_col = mapping[out_col]
869 2245 aaronmk
            value = e.value
870
            log_ignore(in_col, value)
871
            conds[in_col] = sql_gen.CompareCond(value, '!=')
872 2243 aaronmk
            # rerun loop with additional constraints
873 2132 aaronmk
874 2268 aaronmk
    return sql_gen.Col(out_pkey, pkeys_ref[0])
875 2115 aaronmk
876
##### Data cleanup
877
878
def cleanup_table(db, table, cols, table_is_esc=False):
879
    def esc_name_(name): return esc_name(db, name)
880
881
    if not table_is_esc: check_name(table)
882
    cols = map(esc_name_, cols)
883
884
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
885
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
886
            for col in cols))),
887
        dict(null0='', null1=r'\N'))