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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 about 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10031 about 11 years Aaron Marcuse-Kubitza bugfix: backups/.rsync_filter.download: need to...
  bin 10115 about 11 years Aaron Marcuse-Kubitza bin/map: map_table(): Resolve prefixes: combine...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 about 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10109 about 11 years Aaron Marcuse-Kubitza empty inputs/*/import_order.txt: added subdirs ...
  lib 10118 about 11 years Aaron Marcuse-Kubitza lib/common.Makefile: added $(asAdmin)
  mappings 9882 about 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: genus->taxonlabel...
  planning 10111 about 11 years Aaron Marcuse-Kubitza added planning/goals/iPlant_BIEN_Proposal_Final...
  schemas 10119 about 11 years Aaron Marcuse-Kubitza *Makefile: removed $(asAdmin), which is now set...
  web 10099 about 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 about 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 about 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 about 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.5 KB 10119 about 11 years Aaron Marcuse-Kubitza *Makefile: removed $(asAdmin), which is now set...
README.TXT 23.2 KB 10093 about 11 years Aaron Marcuse-Kubitza bugfix: /README.TXT: Maintenance: syncing ~/bie...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 over 11 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 over 11 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 about 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 over 11 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10119 07/02/2013 10:29 AM Aaron Marcuse-Kubitza

*Makefile: removed $(asAdmin), which is now set by lib/common.Makefile

10118 07/02/2013 10:28 AM Aaron Marcuse-Kubitza

lib/common.Makefile: added $(asAdmin)

10117 07/02/2013 10:26 AM Aaron Marcuse-Kubitza

bugfix: schemas/pg_hba.Mac.conf: changed postgres to _postgres for OS X 10.8 Mountain Lion

10116 07/02/2013 09:48 AM Aaron Marcuse-Kubitza

schemas/util.sql: added raise_undefined_column() for use in translating other exceptions to undefined_column

10115 07/02/2013 03:50 AM Aaron Marcuse-Kubitza

bin/map: map_table(): Resolve prefixes: combined db_xml.ColRef() constructor call with creation of args (as tuple) for clarity

10114 07/02/2013 03:35 AM Aaron Marcuse-Kubitza

bin/map: update_in_label(): use in_schema instead of the map spreadsheet column name when available, to allow using one spreadsheet for all datasources (which would not have a datasource-specific spreadsheet column name)

10113 07/02/2013 02:59 AM Aaron Marcuse-Kubitza

schemas/util.sql: added mk_source_col(), which uses the schema name instead of the map spreadsheet header to get the datasource name

10112 07/02/2013 02:44 AM Aaron Marcuse-Kubitza

schemas/util.sql: added table_schema()

10111 07/02/2013 01:15 AM Aaron Marcuse-Kubitza

added planning/goals/iPlant_BIEN_Proposal_Final.pdf with Mark's e-mail notes in iPlant_BIEN_Proposal_Final.pdf.notes.txt

10110 07/01/2013 11:52 PM Aaron Marcuse-Kubitza

bugfix: schemas/util.sql: mk_map_table(): add trigger to remove metadata value entries from the map spreadsheet as it's being imported, since these do not correspond to actual columns in the staging table and will produce an error when trying to rename nonexistent columns to them. note that these entries will still need to be included properly in VegBIEN.csv, which will require changes to the VegBIEN.csv make target.

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