root/trunk/bin @ 12818
| Name | Size | Revision | Age | Author | Comment |
|---|---|---|---|---|---|
| tapir | 1670 | over 12 years | Aaron Marcuse-Kubitza | bin/tapir/tapir2flat.php: Output to specieslink... | |
| .rsync_ignore | 13 Bytes | 10004 | over 11 years | Aaron Marcuse-Kubitza | added bin/.rsync_ignore with filters from /READ... |
| after_import | 472 Bytes | 11429 | about 11 years | Aaron Marcuse-Kubitza | bin/after_import: support turning off the end-o... |
| autoremove | 195 Bytes | 4647 | over 12 years | Aaron Marcuse-Kubitza | autoremove: `svn rm`: Fixed bug where needed to... |
| boldify | 231 Bytes | 11952 | almost 11 years | Aaron Marcuse-Kubitza | bugfix: bin/boldify: also match [[]]-style link... |
| canon | 1.36 KB | 10283 | over 11 years | Aaron Marcuse-Kubitza | bugfix: bin/*: spell out [:alnum:] as [a-zA-Z0-... |
| cat_cols | 759 Bytes | 4655 | over 12 years | Aaron Marcuse-Kubitza | Added cat_cols |
| cat_csv | 2.18 KB | 3071 | over 12 years | Aaron Marcuse-Kubitza | cat_csv: Support overwriting the existing heade... |
| cc_tty | 133 Bytes | 4421 | over 12 years | Aaron Marcuse-Kubitza | Added cc_tty |
| ch_root | 1.43 KB | 3788 | over 12 years | Aaron Marcuse-Kubitza | ch_root, ch_root_via: Documented that these are... |
| ch_root_via | 712 Bytes | 3788 | over 12 years | Aaron Marcuse-Kubitza | ch_root, ch_root_via: Documented that these are... |
| collapse_multimap | 683 Bytes | 7444 | almost 12 years | Aaron Marcuse-Kubitza | Added collapse_multimap, which collapses multim... |
| cols | 639 Bytes | 4662 | over 12 years | Aaron Marcuse-Kubitza | cols: Support CSVs without a header, such as in... |
| count_error_rows | 160 Bytes | 1619 | almost 13 years | Aaron Marcuse-Kubitza | count_error_rows: Allow input to be specified a... |
| csv2db | 2.03 KB | 7652 | almost 12 years | Aaron Marcuse-Kubitza | csv2db: Open input stream in universal newlines... |
| db_dump_localize | 501 Bytes | 2617 | over 12 years | Aaron Marcuse-Kubitza | db_dump_localize: Use new pg_version |
| debug2redmine | 242 Bytes | 3246 | over 12 years | Aaron Marcuse-Kubitza | debug2redmine: Remove profiling information fro... |
| dict2redmine | 3.68 KB | 6838 | about 12 years | Aaron Marcuse-Kubitza | dict2redmine: redmine_add_links(): Hyperlink ju... |
| digir_client | 5.29 KB | 1709 | over 12 years | Aaron Marcuse-Kubitza | Moved parse_str() from xml_dom.py to xml_parse.py |
| disown_all | 418 Bytes | 1978 | over 12 years | Aaron Marcuse-Kubitza | disown_all: Updated to use main function, local... |
| env_password | 1.32 KB | 1953 | over 12 years | Aaron Marcuse-Kubitza | Scripts that are meant to be run in the calling... |
| error_stats | 163 Bytes | 960 | almost 13 years | Aaron Marcuse-Kubitza | error_stats: Fixed to work on Mac |
| expand_braces | 1.87 KB | 3778 | over 12 years | Aaron Marcuse-Kubitza | expand_braces: Fixed bug where needed to get ne... |
| expand_xpath | 445 Bytes | 1827 | over 12 years | Aaron Marcuse-Kubitza | Added expand_xpath to expand XPath abbreviations |
| export_analytical_db | 274 Bytes | 8319 | over 11 years | Aaron Marcuse-Kubitza | bin/export_analytical_db: Replaced analytical_a... |
| filter_errors | 350 Bytes | 3405 | over 12 years | Aaron Marcuse-Kubitza | Always output Usage messages to stderr and word... |
| filter_errors_after | 127 Bytes | 1460 | almost 13 years | Aaron Marcuse-Kubitza | Renamed bin/errors_filter_* to filter_errors_* ... |
| filter_errors_before | 148 Bytes | 1460 | almost 13 years | Aaron Marcuse-Kubitza | Renamed bin/errors_filter_* to filter_errors_* ... |
| filter_out_ci | 928 Bytes | 10283 | over 11 years | Aaron Marcuse-Kubitza | bugfix: bin/*: spell out [:alnum:] as [a-zA-Z0-... |
| filter_out_cs | 829 Bytes | 7033 | almost 12 years | Aaron Marcuse-Kubitza | Added filter_out_cs |
| fix_line_endings | 87 Bytes | 8175 | almost 12 years | Aaron Marcuse-Kubitza | Added bin/fix_line_endings to standardize \r\n ... |
| import_all | 1.71 KB | 11839 | about 11 years | Aaron Marcuse-Kubitza | bin/import_all: don't import NCBI because the l... |
| import_date | 547 Bytes | 6974 | about 12 years | Aaron Marcuse-Kubitza | import_date: Added note that Mac and Linux diff... |
| import_name | 404 Bytes | 6104 | about 12 years | Aaron Marcuse-Kubitza | Added import_name, which gets the name of an im... |
| import_times | 584 Bytes | 10599 | over 11 years | Aaron Marcuse-Kubitza | bugfix: bin/import_times: filtering out the Sou... |
| in_place | 424 Bytes | 8735 | over 11 years | Aaron Marcuse-Kubitza | bin/in_place: set the permissions of the new fi... |
| ins_col | 694 Bytes | 4978 | over 12 years | Aaron Marcuse-Kubitza | ins_col: Added column fill value param |
| invert | 130 Bytes | 3819 | over 12 years | Aaron Marcuse-Kubitza | Added invert |
| jobspecs | 232 Bytes | 1545 | almost 13 years | Aaron Marcuse-Kubitza | Added jobspecs to extract jobspecs (%#) from (p... |
| join | 4.07 KB | 7405 | almost 12 years | Aaron Marcuse-Kubitza | join: Added support for direct mappings to VegB... |
| local_ip | 232 Bytes | 1677 | over 12 years | Aaron Marcuse-Kubitza | Added local_ip to get local IP address |
| lockfile | 1.41 KB | 7430 | almost 12 years | Aaron Marcuse-Kubitza | lockfile: Linux: Documented why newgrp and recu... |
| make | 435 Bytes | 10066 | over 11 years | Aaron Marcuse-Kubitza | bin/make: moved $make_filter_active test to lib... |
| make_analytical_db | 1.5 KB | 12391 | almost 11 years | Aaron Marcuse-Kubitza | bin/make_analytical_db: added `public_validatio... |
| map | 20.5 KB | 11918 | about 11 years | Aaron Marcuse-Kubitza | bugfix: bin/map: in_is_db: don't ignore errors ... |
| mk_rm_indexes | 313 Bytes | 3254 | over 12 years | Aaron Marcuse-Kubitza | mk_rm_indexes: Also include the search_path in ... |
| mtime | 275 Bytes | 6968 | about 12 years | Aaron Marcuse-Kubitza | Added mtime |
| my2pg | 1.43 KB | 10448 | over 11 years | Aaron Marcuse-Kubitza | bin/my2pg: use s!...!...! when either the regex... |
| my2pg.data | 488 Bytes | 10237 | over 11 years | Aaron Marcuse-Kubitza | bin/my2pg*: keep MySQL indefinite dates as text... |
| my2pg_export | 330 Bytes | 8274 | over 11 years | Aaron Marcuse-Kubitza | bin/my2pg_export: Put --password first because ... |
| mysql_bien | 188 Bytes | 7577 | almost 12 years | Aaron Marcuse-Kubitza | Added mysql_bien, which runs a MySQL command on... |
| name2pids | 130 Bytes | 7257 | almost 12 years | Aaron Marcuse-Kubitza | Added name2pids |
| pg_dump_limit | 207 Bytes | 11870 | about 11 years | Aaron Marcuse-Kubitza | bugfix: bin/pg_dump_limit: support errexit by i... |
| pg_dump_vegbien | 809 Bytes | 12041 | almost 11 years | Aaron Marcuse-Kubitza | bugfix: bin/pg_dump_vegbien: fixed arg-count ch... |
| pg_version | 303 Bytes | 2616 | over 12 years | Aaron Marcuse-Kubitza | Added pg_version |
| pid2name | 86 Bytes | 7258 | almost 12 years | Aaron Marcuse-Kubitza | Added pid2name |
| postgres_vegbien | 211 Bytes | 6949 | about 12 years | Aaron Marcuse-Kubitza | vegbien_dest: Changed default $prefix to "", so... |
| profile_stats | 360 Bytes | 848 | almost 13 years | Aaron Marcuse-Kubitza | Added profile_stats to analyze a profiling stat... |
| psql_script_vegbien | 418 Bytes | 7233 | almost 12 years | Aaron Marcuse-Kubitza | psql_script_vegbien: Added no_query_results opt... |
| psql_vegbien | 135 Bytes | 6259 | about 12 years | Aaron Marcuse-Kubitza | psql_vegbien: Run with sh because it no longer ... |
| psql_verbose_vegbien | 329 Bytes | 12394 | almost 11 years | Aaron Marcuse-Kubitza | bin/psql_verbose_vegbien: use \\ instead of \ i... |
| publish_analytical_db | 331 Bytes | 8270 | over 11 years | Aaron Marcuse-Kubitza | bin/publish_analytical_db: Fixed bug where need... |
| redmine_synonyms | 787 Bytes | 8233 | over 11 years | Aaron Marcuse-Kubitza | mappings/Makefile: $(vocab); bin/redmine_synony... |
| reinstall_all | 373 Bytes | 11416 | about 11 years | Aaron Marcuse-Kubitza | bin/*_all: *_main(): renamed to just main() bec... |
| remove_empty | 298 Bytes | 1284 | almost 13 years | Aaron Marcuse-Kubitza | Added remove_empty to remove empty mappings in ... |
| repl | 3.23 KB | 12754 | almost 11 years | Aaron Marcuse-Kubitza | bugfix: bin/repl: only use excluded_prefix_re/e... |
| reverse_join | 330 Bytes | 3405 | over 12 years | Aaron Marcuse-Kubitza | Always output Usage messages to stderr and word... |
| review | 1.87 KB | 4788 | over 12 years | Aaron Marcuse-Kubitza | review: Don't remove XML functions that are uni... |
| row | 438 Bytes | 3405 | over 12 years | Aaron Marcuse-Kubitza | Always output Usage messages to stderr and word... |
| simplify_xpath | 460 Bytes | 611 | almost 13 years | Aaron Marcuse-Kubitza | simplify_xpath: Be case sensitive to handle Veg... |
| sort | 842 Bytes | 727 | almost 13 years | Aaron Marcuse-Kubitza | sort: Sort empty strings last so that inputs wi... |
| sort_ci | 276 Bytes | 7524 | almost 12 years | Aaron Marcuse-Kubitza | Added sort_ci to sort a spreadsheet, ignoring l... |
| sort_filenames | 834 Bytes | 1658 | over 12 years | Aaron Marcuse-Kubitza | Added sort_filenames to sort a list of filename... |
| sort_map | 410 Bytes | 3776 | over 12 years | Aaron Marcuse-Kubitza | sort_map: Remove duplicates resulting from mult... |
| src_map | 1.05 KB | 10077 | over 11 years | Aaron Marcuse-Kubitza | bin/src_map: support custom (or no) new_term_pr... |
| stop_imports | 432 Bytes | 1953 | over 12 years | Aaron Marcuse-Kubitza | Scripts that are meant to be run in the calling... |
| sync_upload | 101 Bytes | 9892 | over 11 years | Aaron Marcuse-Kubitza | added bin/sync_upload, a wrapper around sync_up... |
| tnrs_client | 750 Bytes | 9520 | over 11 years | Aaron Marcuse-Kubitza | lib/tnrs.py: repeated_tnrs_request(): renamed t... |
| tnrs_db | 2.72 KB | 10742 | over 11 years | Aaron Marcuse-Kubitza | bin/tnrs_db: add entry to new batch table |
| translate | 1006 Bytes | 7448 | almost 12 years | Aaron Marcuse-Kubitza | translate: Changed dictionary to thesaurus, sin... |
| translate_ci | 354 Bytes | 7434 | almost 12 years | Aaron Marcuse-Kubitza | Added translate_ci |
| vegbien_dest | 1.05 KB | 8183 | almost 12 years | Aaron Marcuse-Kubitza | schemas/*functions.sql: Renamed to *util.sql be... |
| waitpid | 247 Bytes | 7262 | almost 12 years | Aaron Marcuse-Kubitza | waitpid, lockfile: Changed $interval default to... |
| waitself | 185 Bytes | 7261 | almost 12 years | Aaron Marcuse-Kubitza | Added waitself |
| with_all | 953 Bytes | 11456 | about 11 years | Aaron Marcuse-Kubitza | bugfix: bin/with_all: @inputs default value: us... |
| with_cat | 339 Bytes | 1449 | almost 13 years | Aaron Marcuse-Kubitza | with_cat: Added support for custom cat command ... |
| with_cat_csv | 217 Bytes | 1450 | almost 13 years | Aaron Marcuse-Kubitza | Added with_cat_csv |
- svn:ignore: dotlockfile
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