Project

General

Profile

1 11 aaronmk
# Database access
2
3 1869 aaronmk
import copy
4 2127 aaronmk
import operator
5 11 aaronmk
import re
6 865 aaronmk
import warnings
7 11 aaronmk
8 300 aaronmk
import exc
9 1909 aaronmk
import dicts
10 1893 aaronmk
import iters
11 1960 aaronmk
import lists
12 1889 aaronmk
from Proxy import Proxy
13 1872 aaronmk
import rand
14 2217 aaronmk
import sql_gen
15 862 aaronmk
import strings
16 131 aaronmk
import util
17 11 aaronmk
18 832 aaronmk
##### Exceptions
19
20 2170 aaronmk
def get_cur_query(cur, input_query=None, input_params=None):
21 2168 aaronmk
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24 2170 aaronmk
25
    if raw_query != None: return raw_query
26 2371 aaronmk
    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27 14 aaronmk
28 2170 aaronmk
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30 2771 aaronmk
    exc.add_msg(e, 'query: '+strings.ustr(get_cur_query(*args, **kw_args)))
31 135 aaronmk
32 300 aaronmk
class DbException(exc.ExceptionWithCause):
33 14 aaronmk
    def __init__(self, msg, cause=None, cur=None):
34 2145 aaronmk
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35 14 aaronmk
        if cur != None: _add_cursor_info(self, cur)
36
37 2143 aaronmk
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39 2484 aaronmk
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
40 2143 aaronmk
        self.name = name
41 360 aaronmk
42 2240 aaronmk
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44 2484 aaronmk
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
46 2240 aaronmk
        self.name = name
47
        self.value = value
48
49 2306 aaronmk
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51 2484 aaronmk
        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
53 2306 aaronmk
        self.name = name
54 468 aaronmk
        self.cols = cols
55 11 aaronmk
56 2523 aaronmk
class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62
63 2143 aaronmk
class NameException(DbException): pass
64
65 2306 aaronmk
class DuplicateKeyException(ConstraintException): pass
66 13 aaronmk
67 2306 aaronmk
class NullValueException(ConstraintException): pass
68 13 aaronmk
69 2240 aaronmk
class FunctionValueException(ExceptionWithNameValue): pass
70 2239 aaronmk
71 2143 aaronmk
class DuplicateTableException(ExceptionWithName): pass
72
73 2188 aaronmk
class DuplicateFunctionException(ExceptionWithName): pass
74
75 89 aaronmk
class EmptyRowException(DbException): pass
76
77 865 aaronmk
##### Warnings
78
79
class DbWarning(UserWarning): pass
80
81 1930 aaronmk
##### Result retrieval
82
83
def col_names(cur): return (col[0] for col in cur.description)
84
85
def rows(cur): return iter(lambda: cur.fetchone(), None)
86
87
def consume_rows(cur):
88
    '''Used to fetch all rows so result will be cached'''
89
    iters.consume_iter(rows(cur))
90
91
def next_row(cur): return rows(cur).next()
92
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
96
    return row_
97
98
def next_value(cur): return next_row(cur)[0]
99
100
def value(cur): return row(cur)[0]
101
102
def values(cur): return iters.func_iter(lambda: next_value(cur))
103
104
def value_or_none(cur):
105
    try: return value(cur)
106
    except StopIteration: return None
107
108 2762 aaronmk
##### Escaping
109 2101 aaronmk
110 2573 aaronmk
def esc_name_by_module(module, name):
111
    if module == 'psycopg2' or module == None: quote = '"'
112 2101 aaronmk
    elif module == 'MySQLdb': quote = '`'
113
    else: raise NotImplementedError("Can't escape name for "+module+' database')
114 2500 aaronmk
    return sql_gen.esc_name(name, quote)
115 2101 aaronmk
116
def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
118
119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
121
122
def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
127
128 1869 aaronmk
##### Database connections
129 1849 aaronmk
130 2097 aaronmk
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
131 1926 aaronmk
132 1869 aaronmk
db_engines = {
133
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
134
    'PostgreSQL': ('psycopg2', {}),
135
}
136
137
DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
139
140
def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
147
148 2448 aaronmk
log_debug_none = lambda msg, level=2: None
149 1901 aaronmk
150 1849 aaronmk
class DbConn:
151 2190 aaronmk
    def __init__(self, db_config, serializable=True, autocommit=False,
152
        caching=True, log_debug=log_debug_none):
153 1869 aaronmk
        self.db_config = db_config
154
        self.serializable = serializable
155 2190 aaronmk
        self.autocommit = autocommit
156
        self.caching = caching
157 1901 aaronmk
        self.log_debug = log_debug
158 2193 aaronmk
        self.debug = log_debug != log_debug_none
159 1869 aaronmk
160
        self.__db = None
161 1889 aaronmk
        self.query_results = {}
162 2139 aaronmk
        self._savepoint = 0
163 2671 aaronmk
        self._notices_seen = set()
164 1869 aaronmk
165
    def __getattr__(self, name):
166
        if name == '__dict__': raise Exception('getting __dict__')
167
        if name == 'db': return self._db()
168
        else: raise AttributeError()
169
170
    def __getstate__(self):
171
        state = copy.copy(self.__dict__) # shallow copy
172 1915 aaronmk
        state['log_debug'] = None # don't pickle the debug callback
173 1869 aaronmk
        state['_DbConn__db'] = None # don't pickle the connection
174
        return state
175
176 2165 aaronmk
    def connected(self): return self.__db != None
177
178 1869 aaronmk
    def _db(self):
179
        if self.__db == None:
180
            # Process db_config
181
            db_config = self.db_config.copy() # don't modify input!
182 2097 aaronmk
            schemas = db_config.pop('schemas', None)
183 1869 aaronmk
            module_name, mappings = db_engines[db_config.pop('engine')]
184
            module = __import__(module_name)
185
            _add_module(module)
186
            for orig, new in mappings.iteritems():
187
                try: util.rename_key(db_config, orig, new)
188
                except KeyError: pass
189
190
            # Connect
191
            self.__db = module.connect(**db_config)
192
193
            # Configure connection
194 2676 aaronmk
            if self.serializable and not self.autocommit: self.run_query(
195 2678 aaronmk
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE', log_level=4)
196 2101 aaronmk
            if schemas != None:
197
                schemas_ = ''.join((esc_name(self, s)+', '
198
                    for s in schemas.split(',')))
199 2792 aaronmk
                self.run_query("SELECT set_config('search_path', "
200
                    +self.esc_value(schemas_)
201
                    +" || current_setting('search_path'), false)", log_level=3)
202 1869 aaronmk
203
        return self.__db
204 1889 aaronmk
205 1891 aaronmk
    class DbCursor(Proxy):
206 1927 aaronmk
        def __init__(self, outer):
207 1891 aaronmk
            Proxy.__init__(self, outer.db.cursor())
208 2191 aaronmk
            self.outer = outer
209 1927 aaronmk
            self.query_results = outer.query_results
210 1894 aaronmk
            self.query_lookup = None
211 1891 aaronmk
            self.result = []
212 1889 aaronmk
213 2802 aaronmk
        def execute(self, query):
214 2764 aaronmk
            self._is_insert = query.startswith('INSERT')
215 2797 aaronmk
            self.query_lookup = query
216 2148 aaronmk
            try:
217 2191 aaronmk
                try:
218 2802 aaronmk
                    cur = self.inner.execute(query)
219 2191 aaronmk
                    self.outer.do_autocommit()
220 2802 aaronmk
                finally: self.query = get_cur_query(self.inner, query)
221 1904 aaronmk
            except Exception, e:
222 2802 aaronmk
                _add_cursor_info(e, self, query)
223 1904 aaronmk
                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
226 2800 aaronmk
            if self.rowcount == 0 and query.startswith('SELECT'): # empty SELECT
227
                consume_rows(self) # fetch all rows so result will be cached
228 2762 aaronmk
            return cur
229 1894 aaronmk
230 1891 aaronmk
        def fetchone(self):
231
            row = self.inner.fetchone()
232 1899 aaronmk
            if row != None: self.result.append(row)
233
            # otherwise, fetched all rows
234 1904 aaronmk
            else: self._cache_result()
235
            return row
236
237
        def _cache_result(self):
238 1906 aaronmk
            # For inserts, only cache exceptions since inserts are not
239
            # idempotent, but an invalid insert will always be invalid
240 1930 aaronmk
            if self.query_results != None and (not self._is_insert
241 1906 aaronmk
                or isinstance(self.result, Exception)):
242
243 1894 aaronmk
                assert self.query_lookup != None
244 1916 aaronmk
                self.query_results[self.query_lookup] = self.CacheCursor(
245
                    util.dict_subset(dicts.AttrsDictView(self),
246
                    ['query', 'result', 'rowcount', 'description']))
247 1906 aaronmk
248 1916 aaronmk
        class CacheCursor:
249
            def __init__(self, cached_result): self.__dict__ = cached_result
250
251 1927 aaronmk
            def execute(self, *args, **kw_args):
252 1916 aaronmk
                if isinstance(self.result, Exception): raise self.result
253
                # otherwise, result is a rows list
254
                self.iter = iter(self.result)
255
256
            def fetchone(self):
257
                try: return self.iter.next()
258
                except StopIteration: return None
259 1891 aaronmk
260 2212 aaronmk
    def esc_value(self, value):
261 2663 aaronmk
        try: str_ = self.mogrify('%s', [value])
262
        except NotImplementedError, e:
263
            module = util.root_module(self.db)
264
            if module == 'MySQLdb':
265
                import _mysql
266
                str_ = _mysql.escape_string(value)
267
            else: raise e
268 2374 aaronmk
        return strings.to_unicode(str_)
269 2212 aaronmk
270 2347 aaronmk
    def esc_name(self, name): return esc_name(self, name) # calls global func
271
272 2665 aaronmk
    def can_mogrify(self):
273 2663 aaronmk
        module = util.root_module(self.db)
274 2665 aaronmk
        return module == 'psycopg2'
275 2663 aaronmk
276 2665 aaronmk
    def mogrify(self, query, params=None):
277
        if self.can_mogrify(): return self.db.cursor().mogrify(query, params)
278
        else: raise NotImplementedError("Can't mogrify query")
279
280 2671 aaronmk
    def print_notices(self):
281 2725 aaronmk
        if hasattr(self.db, 'notices'):
282
            for msg in self.db.notices:
283
                if msg not in self._notices_seen:
284
                    self._notices_seen.add(msg)
285
                    self.log_debug(msg, level=2)
286 2671 aaronmk
287 2793 aaronmk
    def run_query(self, query, cacheable=False, log_level=2,
288 2464 aaronmk
        debug_msg_ref=None):
289 2445 aaronmk
        '''
290 2464 aaronmk
        @param log_ignore_excs The log_level will be increased by 2 if the query
291
            throws one of these exceptions.
292 2664 aaronmk
        @param debug_msg_ref If specified, the log message will be returned in
293
            this instead of being output. This allows you to filter log messages
294
            depending on the result of the query.
295 2445 aaronmk
        '''
296 2167 aaronmk
        assert query != None
297
298 2047 aaronmk
        if not self.caching: cacheable = False
299 1903 aaronmk
        used_cache = False
300 2664 aaronmk
301
        def log_msg(query):
302
            if used_cache: cache_status = 'cache hit'
303
            elif cacheable: cache_status = 'cache miss'
304
            else: cache_status = 'non-cacheable'
305
            return 'DB query: '+cache_status+':\n'+strings.as_code(query, 'SQL')
306
307 1903 aaronmk
        try:
308 1927 aaronmk
            # Get cursor
309
            if cacheable:
310
                try:
311 2797 aaronmk
                    cur = self.query_results[query]
312 1927 aaronmk
                    used_cache = True
313
                except KeyError: cur = self.DbCursor(self)
314
            else: cur = self.db.cursor()
315
316 2664 aaronmk
            # Log query
317
            if self.debug and debug_msg_ref == None: # log before running
318
                self.log_debug(log_msg(query), log_level)
319
320 1927 aaronmk
            # Run query
321 2793 aaronmk
            cur.execute(query)
322 1903 aaronmk
        finally:
323 2671 aaronmk
            self.print_notices()
324 2664 aaronmk
            if self.debug and debug_msg_ref != None: # return after running
325 2793 aaronmk
                debug_msg_ref[0] = log_msg(str(get_cur_query(cur, query)))
326 1903 aaronmk
327
        return cur
328 1914 aaronmk
329 2797 aaronmk
    def is_cached(self, query): return query in self.query_results
330 2139 aaronmk
331 2683 aaronmk
    def with_autocommit(self, func, autocommit=True):
332 2801 aaronmk
        import psycopg2.extensions
333
        if autocommit:
334
            isolation_level = psycopg2.extensions.ISOLATION_LEVEL_AUTOCOMMIT
335
        else: isolation_level = psycopg2.extensions.ISOLATION_LEVEL_SERIALIZABLE
336
337
        prev_isolation_level = self.db.isolation_level
338
        self.db.set_isolation_level(isolation_level)
339 2683 aaronmk
        try: return func()
340 2801 aaronmk
        finally: self.db.set_isolation_level(prev_isolation_level)
341 2683 aaronmk
342 2139 aaronmk
    def with_savepoint(self, func):
343 2171 aaronmk
        savepoint = 'level_'+str(self._savepoint)
344 2443 aaronmk
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
345 2139 aaronmk
        self._savepoint += 1
346 2683 aaronmk
        try:
347 2139 aaronmk
            try: return_val = func()
348
            finally:
349
                self._savepoint -= 1
350
                assert self._savepoint >= 0
351
        except:
352 2443 aaronmk
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
353 2139 aaronmk
            raise
354
        else:
355 2443 aaronmk
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
356 2191 aaronmk
            self.do_autocommit()
357 2139 aaronmk
            return return_val
358 2191 aaronmk
359
    def do_autocommit(self):
360
        '''Autocommits if outside savepoint'''
361
        assert self._savepoint >= 0
362
        if self.autocommit and self._savepoint == 0:
363 2668 aaronmk
            self.log_debug('Autocommitting')
364 2191 aaronmk
            self.db.commit()
365 2643 aaronmk
366
    def col_default(self, col):
367
        table = sql_gen.Table('columns', 'information_schema')
368
369
        conds = [('table_name', col.table.name), ('column_name', col.name)]
370
        schema = col.table.schema
371
        if schema != None: conds.append(('table_schema', schema))
372
373 2660 aaronmk
        return sql_gen.as_Code(value(select(self, table, ['column_default'],
374
            conds, order_by='table_schema', limit=1, log_level=3)))
375 2643 aaronmk
            # TODO: order_by search_path schema order
376 1849 aaronmk
377 1869 aaronmk
connect = DbConn
378
379 832 aaronmk
##### Querying
380
381 2068 aaronmk
def mogrify(db, query, params):
382
    module = util.root_module(db.db)
383
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
384
    else: raise NotImplementedError("Can't mogrify query for "+module+
385
        ' database')
386
387 832 aaronmk
##### Recoverable querying
388 15 aaronmk
389 2139 aaronmk
def with_savepoint(db, func): return db.with_savepoint(func)
390 11 aaronmk
391 2791 aaronmk
def run_query(db, query, recover=None, cacheable=False, log_level=2,
392
    log_ignore_excs=None, **kw_args):
393 2794 aaronmk
    '''For params, see DbConn.run_query()'''
394 830 aaronmk
    if recover == None: recover = False
395 2464 aaronmk
    if log_ignore_excs == None: log_ignore_excs = ()
396
    log_ignore_excs = tuple(log_ignore_excs)
397 830 aaronmk
398 2666 aaronmk
    debug_msg_ref = None # usually, db.run_query() logs query before running it
399
    # But if filtering with log_ignore_excs, wait until after exception parsing
400
    if log_ignore_excs != () or not db.can_mogrify(): debug_msg_ref = [None]
401
402 2148 aaronmk
    try:
403 2464 aaronmk
        try:
404 2794 aaronmk
            def run(): return db.run_query(query, cacheable, log_level,
405 2793 aaronmk
                debug_msg_ref, **kw_args)
406 2796 aaronmk
            if recover and not db.is_cached(query):
407 2464 aaronmk
                return with_savepoint(db, run)
408
            else: return run() # don't need savepoint if cached
409
        except Exception, e:
410
            if not recover: raise # need savepoint to run index_cols()
411
            msg = exc.str_(e)
412
413
            match = re.search(r'duplicate key value violates unique constraint '
414 2493 aaronmk
                r'"((_?[^\W_]+)_.+?)"', msg)
415 2464 aaronmk
            if match:
416
                constraint, table = match.groups()
417
                try: cols = index_cols(db, table, constraint)
418
                except NotImplementedError: raise e
419
                else: raise DuplicateKeyException(constraint, cols, e)
420
421 2493 aaronmk
            match = re.search(r'null value in column "(.+?)" violates not-null'
422 2464 aaronmk
                r' constraint', msg)
423
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
424
425
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
426
                r'|date/time field value out of range): "(.+?)"\n'
427 2535 aaronmk
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
428 2464 aaronmk
            if match:
429
                value, name = match.groups()
430
                raise FunctionValueException(name, strings.to_unicode(value), e)
431
432 2526 aaronmk
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
433 2523 aaronmk
                r'is of type', msg)
434
            if match:
435
                col, type_ = match.groups()
436
                raise MissingCastException(type_, col, e)
437
438 2493 aaronmk
            match = re.search(r'relation "(.+?)" already exists', msg)
439 2464 aaronmk
            if match: raise DuplicateTableException(match.group(1), e)
440
441 2493 aaronmk
            match = re.search(r'function "(.+?)" already exists', msg)
442 2464 aaronmk
            if match: raise DuplicateFunctionException(match.group(1), e)
443
444
            raise # no specific exception raised
445
    except log_ignore_excs:
446
        log_level += 2
447
        raise
448
    finally:
449 2666 aaronmk
        if debug_msg_ref != None and debug_msg_ref[0] != None:
450
            db.log_debug(debug_msg_ref[0], log_level)
451 830 aaronmk
452 832 aaronmk
##### Basic queries
453
454 2153 aaronmk
def next_version(name):
455 2163 aaronmk
    version = 1 # first existing name was version 0
456 2586 aaronmk
    match = re.match(r'^(.*)#(\d+)$', name)
457 2153 aaronmk
    if match:
458 2586 aaronmk
        name, version = match.groups()
459
        version = int(version)+1
460 2588 aaronmk
    return sql_gen.add_suffix(name, '#'+str(version))
461 2153 aaronmk
462 2789 aaronmk
def run_query_into(db, query, into=None, add_indexes_=False, **kw_args):
463 2085 aaronmk
    '''Outputs a query to a temp table.
464
    For params, see run_query().
465
    '''
466 2789 aaronmk
    if into == None: return run_query(db, query, **kw_args)
467 2790 aaronmk
468
    assert isinstance(into, sql_gen.Table)
469
470
    kw_args['recover'] = True
471
    kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
472
473
    temp = not db.autocommit # tables are permanent in autocommit mode
474
    # "temporary tables cannot specify a schema name", so remove schema
475
    if temp: into.schema = None
476
477
    # Create table
478
    while True:
479
        create_query = 'CREATE'
480
        if temp: create_query += ' TEMP'
481
        create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
482 2385 aaronmk
483 2790 aaronmk
        try:
484
            cur = run_query(db, create_query, **kw_args)
485
                # CREATE TABLE AS sets rowcount to # rows in query
486
            break
487
        except DuplicateTableException, e:
488
            into.name = next_version(into.name)
489
            # try again with next version of name
490
491
    if add_indexes_: add_indexes(db, into)
492
493
    return cur
494 2085 aaronmk
495 2120 aaronmk
order_by_pkey = object() # tells mk_select() to order by the pkey
496
497 2199 aaronmk
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
498
499 2233 aaronmk
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
500 2293 aaronmk
    start=None, order_by=order_by_pkey, default_table=None):
501 1981 aaronmk
    '''
502 2121 aaronmk
    @param tables The single table to select from, or a list of tables to join
503 2280 aaronmk
        together, with tables after the first being sql_gen.Join objects
504 1981 aaronmk
    @param fields Use None to select all fields in the table
505 2377 aaronmk
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
506 2379 aaronmk
        * container can be any iterable type
507 2399 aaronmk
        * compare_left_side: sql_gen.Code|str (for col name)
508
        * compare_right_side: sql_gen.ValueCond|literal value
509 2199 aaronmk
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
510
        use all columns
511 2786 aaronmk
    @return query
512 1981 aaronmk
    '''
513 2315 aaronmk
    # Parse tables param
514 2121 aaronmk
    if not lists.is_seq(tables): tables = [tables]
515 2141 aaronmk
    tables = list(tables) # don't modify input! (list() copies input)
516 2315 aaronmk
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
517 2121 aaronmk
518 2315 aaronmk
    # Parse other params
519 2376 aaronmk
    if conds == None: conds = []
520 2650 aaronmk
    elif dicts.is_dict(conds): conds = conds.items()
521 2379 aaronmk
    conds = list(conds) # don't modify input! (list() copies input)
522 135 aaronmk
    assert limit == None or type(limit) == int
523 865 aaronmk
    assert start == None or type(start) == int
524 2315 aaronmk
    if order_by is order_by_pkey:
525
        if distinct_on != []: order_by = None
526
        else: order_by = pkey(db, table0, recover=True)
527 865 aaronmk
528 2315 aaronmk
    query = 'SELECT'
529 2056 aaronmk
530 2315 aaronmk
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
531 2056 aaronmk
532 2200 aaronmk
    # DISTINCT ON columns
533 2233 aaronmk
    if distinct_on != []:
534 2467 aaronmk
        query += '\nDISTINCT'
535 2254 aaronmk
        if distinct_on is not distinct_on_all:
536 2200 aaronmk
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
537
538
    # Columns
539 2467 aaronmk
    query += '\n'
540 1135 aaronmk
    if fields == None: query += '*'
541 2765 aaronmk
    else:
542
        assert fields != []
543
        query += '\n, '.join(map(parse_col, fields))
544 2200 aaronmk
545
    # Main table
546 2467 aaronmk
    query += '\nFROM '+table0.to_str(db)
547 865 aaronmk
548 2122 aaronmk
    # Add joins
549 2271 aaronmk
    left_table = table0
550 2263 aaronmk
    for join_ in tables:
551
        table = join_.table
552 2238 aaronmk
553 2343 aaronmk
        # Parse special values
554
        if join_.type_ is sql_gen.filter_out: # filter no match
555 2376 aaronmk
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
556
                None))
557 2343 aaronmk
558 2467 aaronmk
        query += '\n'+join_.to_str(db, left_table)
559 2122 aaronmk
560
        left_table = table
561
562 865 aaronmk
    missing = True
563 2376 aaronmk
    if conds != []:
564 2576 aaronmk
        if len(conds) == 1: whitespace = ' '
565
        else: whitespace = '\n'
566 2578 aaronmk
        query += '\n'+sql_gen.combine_conds([sql_gen.ColValueCond(l, r)
567
            .to_str(db) for l, r in conds], 'WHERE')
568 865 aaronmk
        missing = False
569 2227 aaronmk
    if order_by != None:
570 2467 aaronmk
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
571
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
572 865 aaronmk
    if start != None:
573 2467 aaronmk
        if start != 0: query += '\nOFFSET '+str(start)
574 865 aaronmk
        missing = False
575
    if missing: warnings.warn(DbWarning(
576
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
577
578 2786 aaronmk
    return query
579 11 aaronmk
580 2054 aaronmk
def select(db, *args, **kw_args):
581
    '''For params, see mk_select() and run_query()'''
582
    recover = kw_args.pop('recover', None)
583
    cacheable = kw_args.pop('cacheable', True)
584 2442 aaronmk
    log_level = kw_args.pop('log_level', 2)
585 2054 aaronmk
586 2791 aaronmk
    return run_query(db, mk_select(db, *args, **kw_args), recover, cacheable,
587
        log_level=log_level)
588 2054 aaronmk
589 2788 aaronmk
def mk_insert_select(db, table, cols=None, select_query=None, returning=None,
590
    embeddable=False):
591 1960 aaronmk
    '''
592
    @param returning str|None An inserted column (such as pkey) to return
593 2070 aaronmk
    @param embeddable Whether the query should be embeddable as a nested SELECT.
594 2073 aaronmk
        Warning: If you set this and cacheable=True when the query is run, the
595
        query will be fully cached, not just if it raises an exception.
596 1960 aaronmk
    '''
597 2754 aaronmk
    table = sql_gen.remove_table_rename(sql_gen.as_Table(table))
598 2318 aaronmk
    if cols == []: cols = None # no cols (all defaults) = unknown col names
599 2646 aaronmk
    if cols != None:
600
        cols = [sql_gen.to_name_only_col(v, table).to_str(db) for v in cols]
601 2063 aaronmk
    if select_query == None: select_query = 'DEFAULT VALUES'
602 2327 aaronmk
    if returning != None: returning = sql_gen.as_Col(returning, table)
603 2063 aaronmk
604
    # Build query
605 2497 aaronmk
    first_line = 'INSERT INTO '+table.to_str(db)
606
    query = first_line
607 2467 aaronmk
    if cols != None: query += '\n('+', '.join(cols)+')'
608
    query += '\n'+select_query
609 2063 aaronmk
610
    if returning != None:
611 2743 aaronmk
        query += '\nRETURNING '+sql_gen.to_name_only_col(returning).to_str(db)
612 2063 aaronmk
613 2070 aaronmk
    if embeddable:
614 2327 aaronmk
        assert returning != None
615
616 2070 aaronmk
        # Create function
617 2513 aaronmk
        function_name = sql_gen.clean_name(first_line)
618 2327 aaronmk
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
619 2189 aaronmk
        while True:
620
            try:
621 2698 aaronmk
                function = sql_gen.TempFunction(function_name, db.autocommit)
622 2194 aaronmk
623 2189 aaronmk
                function_query = '''\
624 2698 aaronmk
CREATE FUNCTION '''+function.to_str(db)+'''()
625 2467 aaronmk
RETURNS '''+return_type+'''
626
LANGUAGE sql
627
AS $$
628 2788 aaronmk
'''+query+''';
629 2467 aaronmk
$$;
630 2070 aaronmk
'''
631 2446 aaronmk
                run_query(db, function_query, recover=True, cacheable=True,
632 2464 aaronmk
                    log_ignore_excs=(DuplicateFunctionException,))
633 2189 aaronmk
                break # this version was successful
634
            except DuplicateFunctionException, e:
635
                function_name = next_version(function_name)
636
                # try again with next version of name
637 2070 aaronmk
638 2337 aaronmk
        # Return query that uses function
639 2698 aaronmk
        func_table = sql_gen.NamedTable('f', sql_gen.FunctionCall(function),
640 2742 aaronmk
            [returning]) # AS clause requires function alias
641 2787 aaronmk
        return mk_select(db, func_table, start=0, order_by=None)
642 2070 aaronmk
643 2787 aaronmk
    return query
644 2066 aaronmk
645
def insert_select(db, *args, **kw_args):
646 2085 aaronmk
    '''For params, see mk_insert_select() and run_query_into()
647 2386 aaronmk
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
648
        values in
649 2072 aaronmk
    '''
650 2386 aaronmk
    into = kw_args.pop('into', None)
651
    if into != None: kw_args['embeddable'] = True
652 2066 aaronmk
    recover = kw_args.pop('recover', None)
653
    cacheable = kw_args.pop('cacheable', True)
654 2673 aaronmk
    log_level = kw_args.pop('log_level', 2)
655 2066 aaronmk
656 2789 aaronmk
    return run_query_into(db, mk_insert_select(db, *args, **kw_args), into,
657 2787 aaronmk
        recover=recover, cacheable=cacheable, log_level=log_level)
658 2063 aaronmk
659 2738 aaronmk
default = sql_gen.default # tells insert() to use the default value for a column
660 2066 aaronmk
661 2063 aaronmk
def insert(db, table, row, *args, **kw_args):
662 2085 aaronmk
    '''For params, see insert_select()'''
663 1960 aaronmk
    if lists.is_seq(row): cols = None
664
    else:
665
        cols = row.keys()
666
        row = row.values()
667 2738 aaronmk
    row = list(row) # ensure that "== []" works
668 1960 aaronmk
669 2738 aaronmk
    if row == []: query = None
670
    else: query = sql_gen.Values(row).to_str(db)
671 1961 aaronmk
672 2788 aaronmk
    return insert_select(db, table, cols, query, *args, **kw_args)
673 11 aaronmk
674 2402 aaronmk
def mk_update(db, table, changes=None, cond=None):
675
    '''
676
    @param changes [(col, new_value),...]
677
        * container can be any iterable type
678
        * col: sql_gen.Code|str (for col name)
679
        * new_value: sql_gen.Code|literal value
680
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
681
    @return str query
682
    '''
683
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
684 2405 aaronmk
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
685 2402 aaronmk
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
686 2467 aaronmk
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
687 2402 aaronmk
688
    return query
689
690
def update(db, *args, **kw_args):
691
    '''For params, see mk_update() and run_query()'''
692
    recover = kw_args.pop('recover', None)
693
694 2791 aaronmk
    return run_query(db, mk_update(db, *args, **kw_args), recover)
695 2402 aaronmk
696 135 aaronmk
def last_insert_id(db):
697 1849 aaronmk
    module = util.root_module(db.db)
698 135 aaronmk
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
699
    elif module == 'MySQLdb': return db.insert_id()
700
    else: return None
701 13 aaronmk
702 2394 aaronmk
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
703 2383 aaronmk
    '''Creates a mapping from original column names (which may have collisions)
704 2415 aaronmk
    to names that will be distinct among the columns' tables.
705 2383 aaronmk
    This is meant to be used for several tables that are being joined together.
706 2415 aaronmk
    @param cols The columns to combine. Duplicates will be removed.
707
    @param into The table for the new columns.
708 2394 aaronmk
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
709
        columns will be included in the mapping even if they are not in cols.
710
        The tables of the provided Col objects will be changed to into, so make
711
        copies of them if you want to keep the original tables.
712
    @param as_items Whether to return a list of dict items instead of a dict
713 2383 aaronmk
    @return dict(orig_col=new_col, ...)
714
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
715 2392 aaronmk
        * new_col: sql_gen.Col(orig_col_name, into)
716
        * All mappings use the into table so its name can easily be
717 2383 aaronmk
          changed for all columns at once
718
    '''
719 2415 aaronmk
    cols = lists.uniqify(cols)
720
721 2394 aaronmk
    items = []
722 2389 aaronmk
    for col in preserve:
723 2390 aaronmk
        orig_col = copy.copy(col)
724 2392 aaronmk
        col.table = into
725 2394 aaronmk
        items.append((orig_col, col))
726
    preserve = set(preserve)
727
    for col in cols:
728 2716 aaronmk
        if col not in preserve:
729
            items.append((col, sql_gen.Col(str(col), into, col.srcs)))
730 2394 aaronmk
731
    if not as_items: items = dict(items)
732
    return items
733 2383 aaronmk
734 2393 aaronmk
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
735 2391 aaronmk
    '''For params, see mk_flatten_mapping()
736
    @return See return value of mk_flatten_mapping()
737
    '''
738 2394 aaronmk
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
739
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
740 2786 aaronmk
    run_query_into(db, mk_select(db, joins, cols, limit=limit, start=start),
741 2392 aaronmk
        into=into)
742 2394 aaronmk
    return dict(items)
743 2391 aaronmk
744 2751 aaronmk
def mk_track_data_error(db, errors_table, cols, value, error_code, error):
745
    cols = map(sql_gen.to_name_only_col, cols)
746
747
    columns_cols = ['column']
748
    columns = sql_gen.NamedValues('columns', columns_cols,
749
        [[c.name] for c in cols])
750
    values_cols = ['value', 'error_code', 'error']
751
    values = sql_gen.NamedValues('values', values_cols,
752
        [value, error_code, error])
753
754
    select_cols = columns_cols+values_cols
755
    name_only_cols = map(sql_gen.to_name_only_col, select_cols)
756 2755 aaronmk
    errors_table = sql_gen.NamedTable('errors', errors_table)
757 2751 aaronmk
    joins = [columns, sql_gen.Join(values, type_='CROSS'),
758
        sql_gen.Join(errors_table, dict(zip(name_only_cols, select_cols)),
759
        sql_gen.filter_out)]
760
761
    return mk_insert_select(db, errors_table, name_only_cols,
762 2787 aaronmk
        mk_select(db, joins, select_cols, order_by=None))
763 2751 aaronmk
764 2758 aaronmk
def track_data_error(db, errors_table, *args, **kw_args):
765
    '''
766
    @param errors_table If None, does nothing.
767
    '''
768
    if errors_table == None: return
769
    run_query(db, mk_track_data_error(db, errors_table, *args, **kw_args),
770
        cacheable=True, log_level=4)
771
772 2704 aaronmk
def cast(db, type_, col, errors_table=None):
773
    '''Casts an (unrenamed) column or value.
774 2769 aaronmk
    If errors_table set and col has srcs, saves errors in errors_table (using
775
    col's srcs attr as the source columns) and converts errors to warnings.
776 2704 aaronmk
    @param col sql_gen.Col|sql_gen.Literal
777
    @param errors_table None|sql_gen.Table|str
778
    '''
779 2769 aaronmk
    save_errors = (errors_table != None and isinstance(col, sql_gen.Col)
780
        and col.srcs != ())
781
    if not save_errors: # can't save errors
782
        return sql_gen.CustomCode(col.to_str(db)+'::'+type_) # just cast
783 2704 aaronmk
784
    assert not isinstance(col, sql_gen.NamedCol)
785
786 2770 aaronmk
    errors_table = sql_gen.as_Table(errors_table)
787
    srcs = map(sql_gen.to_name_only_col, col.srcs)
788
    function_name = str(sql_gen.FunctionCall(type_, *srcs))
789 2704 aaronmk
    function = sql_gen.TempFunction(function_name, db.autocommit)
790
791 2718 aaronmk
    while True:
792
        # Create function definition
793
        query = '''\
794 2704 aaronmk
CREATE FUNCTION '''+function.to_str(db)+'''(value text)
795
RETURNS '''+type_+'''
796
LANGUAGE plpgsql
797
STRICT
798
AS $$
799
BEGIN
800
    /* The explicit cast to the return type is needed to make the cast happen
801
    inside the try block. (Implicit casts to the return type happen at the end
802
    of the function, outside any block.) */
803
    RETURN value::'''+type_+''';
804
EXCEPTION
805
    WHEN data_exception THEN
806
        -- Save error in errors table.
807 2751 aaronmk
        -- Insert the value and error for *each* source column.
808
'''+mk_track_data_error(db, errors_table, srcs,
809
    *map(sql_gen.CustomCode, ['value', 'SQLSTATE', 'SQLERRM']))+''';
810 2704 aaronmk
811
        RAISE WARNING '%', SQLERRM;
812
        RETURN NULL;
813
END;
814
$$;
815
'''
816 2718 aaronmk
817
        # Create function
818
        try:
819
            run_query(db, query, recover=True, cacheable=True,
820
                log_ignore_excs=(DuplicateFunctionException,))
821
            break # successful
822
        except DuplicateFunctionException:
823 2770 aaronmk
            function.name = next_version(function.name)
824
            # try again with next version of name
825 2704 aaronmk
826
    return sql_gen.FunctionCall(function, col)
827
828 2414 aaronmk
##### Database structure queries
829
830 2426 aaronmk
def table_row_count(db, table, recover=None):
831 2786 aaronmk
    return value(run_query(db, mk_select(db, table, [sql_gen.row_count],
832 2443 aaronmk
        order_by=None, start=0), recover=recover, log_level=3))
833 2426 aaronmk
834 2414 aaronmk
def table_cols(db, table, recover=None):
835
    return list(col_names(select(db, table, limit=0, order_by=None,
836 2443 aaronmk
        recover=recover, log_level=4)))
837 2414 aaronmk
838 2291 aaronmk
def pkey(db, table, recover=None):
839 832 aaronmk
    '''Assumed to be first column in table'''
840 2339 aaronmk
    return table_cols(db, table, recover)[0]
841 832 aaronmk
842 2559 aaronmk
not_null_col = 'not_null_col'
843 2340 aaronmk
844
def table_not_null_col(db, table, recover=None):
845
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
846
    if not_null_col in table_cols(db, table, recover): return not_null_col
847
    else: return pkey(db, table, recover)
848
849 853 aaronmk
def index_cols(db, table, index):
850
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
851
    automatically created. When you don't know whether something is a UNIQUE
852
    constraint or a UNIQUE index, use this function.'''
853 1909 aaronmk
    module = util.root_module(db.db)
854
    if module == 'psycopg2':
855
        return list(values(run_query(db, '''\
856 853 aaronmk
SELECT attname
857 866 aaronmk
FROM
858
(
859
        SELECT attnum, attname
860
        FROM pg_index
861
        JOIN pg_class index ON index.oid = indexrelid
862
        JOIN pg_class table_ ON table_.oid = indrelid
863
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
864
        WHERE
865 2782 aaronmk
            table_.relname = '''+db.esc_value(table)+'''
866
            AND index.relname = '''+db.esc_value(index)+'''
867 866 aaronmk
    UNION
868
        SELECT attnum, attname
869
        FROM
870
        (
871
            SELECT
872
                indrelid
873
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
874
                    AS indkey
875
            FROM pg_index
876
            JOIN pg_class index ON index.oid = indexrelid
877
            JOIN pg_class table_ ON table_.oid = indrelid
878
            WHERE
879 2782 aaronmk
                table_.relname = '''+db.esc_value(table)+'''
880
                AND index.relname = '''+db.esc_value(index)+'''
881 866 aaronmk
        ) s
882
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
883
) s
884 853 aaronmk
ORDER BY attnum
885 2782 aaronmk
'''
886
            , cacheable=True, log_level=4)))
887 1909 aaronmk
    else: raise NotImplementedError("Can't list index columns for "+module+
888
        ' database')
889 853 aaronmk
890 464 aaronmk
def constraint_cols(db, table, constraint):
891 1849 aaronmk
    module = util.root_module(db.db)
892 464 aaronmk
    if module == 'psycopg2':
893
        return list(values(run_query(db, '''\
894
SELECT attname
895
FROM pg_constraint
896
JOIN pg_class ON pg_class.oid = conrelid
897
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
898
WHERE
899 2783 aaronmk
    relname = '''+db.esc_value(table)+'''
900
    AND conname = '''+db.esc_value(constraint)+'''
901 464 aaronmk
ORDER BY attnum
902 2783 aaronmk
'''
903
            )))
904 464 aaronmk
    else: raise NotImplementedError("Can't list constraint columns for "+module+
905
        ' database')
906
907 2096 aaronmk
row_num_col = '_row_num'
908
909 2688 aaronmk
def add_index(db, exprs, table=None, unique=False):
910
    '''Adds an index on column(s) or expression(s) if it doesn't already exist.
911 2538 aaronmk
    Currently, only function calls are supported as expressions.
912
    '''
913 2688 aaronmk
    if not lists.is_seq(exprs): exprs = [exprs]
914 2538 aaronmk
915 2688 aaronmk
    # Parse exprs
916
    old_exprs = exprs[:]
917
    exprs = []
918
    cols = []
919
    for i, expr in enumerate(old_exprs):
920
        expr = copy.deepcopy(expr) # don't modify input!
921
        expr = sql_gen.as_Col(expr)
922
923
        # Extract col
924
        if isinstance(expr, sql_gen.FunctionCall):
925
            col = expr.args[0]
926
            expr = sql_gen.Expr(expr)
927
        else: col = expr
928
929
        # Extract table
930
        if table == None:
931
            assert sql_gen.is_table_col(col)
932
            table = col.table
933
934
        col.table = None
935
936
        exprs.append(expr)
937
        cols.append(col)
938 2408 aaronmk
939 2688 aaronmk
    table = sql_gen.as_Table(table)
940
    index = sql_gen.Table(str(sql_gen.Col(','.join(map(str, cols)), table)))
941
942
    str_ = 'CREATE'
943
    if unique: str_ += ' UNIQUE'
944
    str_ += ' INDEX '+index.to_str(db)+' ON '+table.to_str(db)+' ('+(
945
        ', '.join((v.to_str(db) for v in exprs)))+')'
946
947
    try: run_query(db, str_, recover=True, cacheable=True, log_level=3)
948 2408 aaronmk
    except DuplicateTableException: pass # index already existed
949
950 2686 aaronmk
def add_pkey(db, table, cols=None, recover=None):
951
    '''Adds a primary key.
952
    @param cols [sql_gen.Col,...] The columns in the primary key.
953
        Defaults to the first column in the table.
954 2406 aaronmk
    @pre The table must not already have a primary key.
955
    '''
956
    table = sql_gen.as_Table(table)
957 2686 aaronmk
    if cols == None: cols = [pkey(db, table, recover)]
958
    col_strs = [sql_gen.to_name_only_col(v).to_str(db) for v in cols]
959 2406 aaronmk
960 2781 aaronmk
    run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD PRIMARY KEY ('
961
        +(', '.join(col_strs))+')', recover=True, cacheable=True, log_level=3,
962
        log_ignore_excs=(DuplicateTableException,))
963 2406 aaronmk
964 2772 aaronmk
already_indexed = object() # tells add_indexes() the pkey has already been added
965
966
def add_indexes(db, table, has_pkey=True):
967
    '''Adds an index on all columns in a table.
968
    @param has_pkey bool|already_indexed Whether a pkey instead of a regular
969
        index should be added on the first column.
970
        * If already_indexed, the pkey is assumed to have already been added
971
    '''
972
    cols = table_cols(db, table)
973
    if has_pkey:
974
        if has_pkey is not already_indexed: add_pkey(db, table)
975
        cols = cols[1:]
976
    for col in cols: add_index(db, col, table)
977
978 2086 aaronmk
def add_row_num(db, table):
979 2117 aaronmk
    '''Adds a row number column to a table. Its name is in row_num_col. It will
980
    be the primary key.'''
981 2320 aaronmk
    table = sql_gen.as_Table(table).to_str(db)
982 2096 aaronmk
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
983 2443 aaronmk
        +' serial NOT NULL PRIMARY KEY', log_level=3)
984 2086 aaronmk
985 2760 aaronmk
def create_table(db, table, cols, has_pkey=True, col_indexes=True):
986 2675 aaronmk
    '''Creates a table.
987 2681 aaronmk
    @param cols [sql_gen.TypedCol,...] The column names and types
988
    @param has_pkey If set, the first column becomes the primary key.
989 2760 aaronmk
    @param col_indexes bool|[ref]
990
        * If True, indexes will be added on all non-pkey columns.
991
        * If a list reference, [0] will be set to a function to do this.
992
          This can be used to delay index creation until the table is populated.
993 2675 aaronmk
    '''
994
    table = sql_gen.as_Table(table)
995
996 2681 aaronmk
    if has_pkey:
997
        cols[0] = pkey = copy.copy(cols[0]) # don't modify input!
998
        pkey.type += ' NOT NULL PRIMARY KEY'
999
1000 2675 aaronmk
    str_ = 'CREATE TABLE '+table.to_str(db)+' (\n'
1001 2681 aaronmk
    str_ += '\n, '.join(v.to_str(db) for v in cols)
1002
    str_ += '\n);\n'
1003 2675 aaronmk
    run_query(db, str_, cacheable=True, log_level=2)
1004 2760 aaronmk
1005
    # Add indexes
1006 2773 aaronmk
    if has_pkey: has_pkey = already_indexed
1007
    def add_indexes_(): add_indexes(db, table, has_pkey)
1008
    if isinstance(col_indexes, list): col_indexes[0] = add_indexes_ # defer
1009
    elif col_indexes: add_indexes_() # add now
1010 2675 aaronmk
1011 2684 aaronmk
def vacuum(db, table):
1012
    table = sql_gen.as_Table(table)
1013
    db.with_autocommit(lambda: run_query(db, 'VACUUM ANALYZE '+table.to_str(db),
1014
        log_level=3))
1015
1016 2732 aaronmk
def truncate(db, table, schema='public'):
1017 2777 aaronmk
    table = sql_gen.as_Table(table, schema)
1018 2733 aaronmk
    return run_query(db, 'TRUNCATE '+table.to_str(db)+' CASCADE')
1019 2732 aaronmk
1020 2729 aaronmk
def tables(db, schema_like='public', table_like='%', exact=False):
1021
    if exact: compare = '='
1022
    else: compare = 'LIKE'
1023
1024 1849 aaronmk
    module = util.root_module(db.db)
1025 832 aaronmk
    if module == 'psycopg2':
1026 2779 aaronmk
        conds = [('schemaname', sql_gen.CompareCond(schema_like, compare)),
1027
            ('tablename', sql_gen.CompareCond(table_like, compare))]
1028
        return values(select(db, 'pg_tables', ['tablename'], conds,
1029
            order_by='tablename', log_level=4))
1030 1968 aaronmk
    elif module == 'MySQLdb':
1031 2779 aaronmk
        return values(run_query(db, 'SHOW TABLES LIKE '+db.esc_value(table_like)
1032
            , cacheable=True, log_level=4))
1033 832 aaronmk
    else: raise NotImplementedError("Can't list tables for "+module+' database')
1034 830 aaronmk
1035 2726 aaronmk
def table_exists(db, table):
1036
    table = sql_gen.as_Table(table)
1037 2730 aaronmk
    return list(tables(db, table.schema, table.name, exact=True)) != []
1038 2726 aaronmk
1039
def errors_table(db, table, if_exists=True):
1040
    '''
1041
    @param if_exists If set, returns None if the errors table doesn't exist
1042
    @return None|sql_gen.Table
1043
    '''
1044
    table = sql_gen.as_Table(table)
1045
    if table.srcs != (): table = table.srcs[0]
1046
1047
    errors_table = sql_gen.suffixed_table(table, '.errors')
1048
    if if_exists and not table_exists(db, errors_table): return None
1049
    return errors_table
1050
1051 833 aaronmk
##### Database management
1052
1053 1968 aaronmk
def empty_db(db, schema='public', **kw_args):
1054
    '''For kw_args, see tables()'''
1055
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
1056 833 aaronmk
1057 832 aaronmk
##### Heuristic queries
1058
1059 2104 aaronmk
def put(db, table, row, pkey_=None, row_ct_ref=None):
1060 1554 aaronmk
    '''Recovers from errors.
1061 2077 aaronmk
    Only works under PostgreSQL (uses INSERT RETURNING).
1062
    '''
1063 2642 aaronmk
    row = sql_gen.ColDict(db, table, row)
1064 2104 aaronmk
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
1065
1066 471 aaronmk
    try:
1067 2149 aaronmk
        cur = insert(db, table, row, pkey_, recover=True)
1068 1554 aaronmk
        if row_ct_ref != None and cur.rowcount >= 0:
1069
            row_ct_ref[0] += cur.rowcount
1070
        return value(cur)
1071 471 aaronmk
    except DuplicateKeyException, e:
1072 2653 aaronmk
        row = sql_gen.ColDict(db, table,
1073
            util.dict_subset_right_join(row, e.cols))
1074
        return value(select(db, table, [pkey_], row, recover=True))
1075 471 aaronmk
1076 473 aaronmk
def get(db, table, row, pkey, row_ct_ref=None, create=False):
1077 830 aaronmk
    '''Recovers from errors'''
1078 2209 aaronmk
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
1079 14 aaronmk
    except StopIteration:
1080 40 aaronmk
        if not create: raise
1081 471 aaronmk
        return put(db, table, row, pkey, row_ct_ref) # insert new row
1082 2078 aaronmk
1083 2593 aaronmk
def is_func_result(col):
1084
    return col.table.name.find('(') >= 0 and col.name == 'result'
1085
1086 2592 aaronmk
def into_table_name(out_table, in_tables0, mapping, is_func):
1087 2615 aaronmk
    def in_col_str(in_col):
1088
        in_col = sql_gen.remove_col_rename(in_col)
1089
        if isinstance(in_col, sql_gen.Col):
1090
            table = in_col.table
1091
            if table == in_tables0:
1092
                in_col = sql_gen.to_name_only_col(in_col)
1093
            elif is_func_result(in_col): in_col = table # omit col name
1094
        return str(in_col)
1095
1096 2580 aaronmk
    str_ = str(out_table)
1097
    if is_func:
1098 2615 aaronmk
        str_ += '('
1099 2580 aaronmk
1100 2615 aaronmk
        try: value_in_col = mapping['value']
1101
        except KeyError:
1102 2654 aaronmk
            str_ += ', '.join((str(k)+'='+in_col_str(v)
1103 2615 aaronmk
                for k, v in mapping.iteritems()))
1104
        else: str_ += in_col_str(value_in_col)
1105
1106
        str_ += ')'
1107 2580 aaronmk
    else: str_ += '_pkeys'
1108
    return str_
1109
1110 2508 aaronmk
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
1111 2552 aaronmk
    default=None, is_func=False):
1112 2078 aaronmk
    '''Recovers from errors.
1113
    Only works under PostgreSQL (uses INSERT RETURNING).
1114 2131 aaronmk
    @param in_tables The main input table to select from, followed by a list of
1115
        tables to join with it using the main input table's pkey
1116 2312 aaronmk
    @param mapping dict(out_table_col=in_table_col, ...)
1117 2612 aaronmk
        * out_table_col: str (*not* sql_gen.Col)
1118
        * in_table_col: sql_gen.Col|literal-value
1119 2489 aaronmk
    @param into The table to contain the output and input pkeys.
1120 2574 aaronmk
        Defaults to `out_table.name+'_pkeys'`.
1121 2509 aaronmk
    @param default The *output* column to use as the pkey for missing rows.
1122
        If this output column does not exist in the mapping, uses None.
1123 2552 aaronmk
    @param is_func Whether out_table is the name of a SQL function, not a table
1124 2312 aaronmk
    @return sql_gen.Col Where the output pkeys are made available
1125 2078 aaronmk
    '''
1126 2329 aaronmk
    out_table = sql_gen.as_Table(out_table)
1127 2312 aaronmk
1128 2450 aaronmk
    def log_debug(msg): db.log_debug(msg, level=1.5)
1129 2505 aaronmk
    def col_ustr(str_):
1130 2567 aaronmk
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
1131 2450 aaronmk
1132 2768 aaronmk
    out_pkey = pkey(db, out_table, recover=True)
1133
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
1134
1135
    if mapping == {}: # need at least one column for INSERT SELECT
1136
        mapping = {out_pkey: None} # ColDict will replace with default value
1137
1138 2486 aaronmk
    log_debug('********** New iteration **********')
1139 2505 aaronmk
    log_debug('Inserting these input columns into '+strings.as_tt(
1140
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
1141 2463 aaronmk
1142 2382 aaronmk
    # Create input joins from list of input tables
1143
    in_tables_ = in_tables[:] # don't modify input!
1144
    in_tables0 = in_tables_.pop(0) # first table is separate
1145 2735 aaronmk
    errors_table_ = errors_table(db, in_tables0)
1146 2279 aaronmk
    in_pkey = pkey(db, in_tables0, recover=True)
1147 2285 aaronmk
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
1148 2460 aaronmk
    input_joins = [in_tables0]+[sql_gen.Join(v,
1149
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
1150 2131 aaronmk
1151 2592 aaronmk
    if into == None:
1152
        into = into_table_name(out_table, in_tables0, mapping, is_func)
1153
    into = sql_gen.as_Table(into)
1154
1155 2702 aaronmk
    # Set column sources
1156
    in_cols = filter(sql_gen.is_table_col, mapping.values())
1157
    for col in in_cols:
1158
        if col.table == in_tables0: col.set_srcs(sql_gen.src_self)
1159
1160 2486 aaronmk
    log_debug('Joining together input tables into temp table')
1161 2395 aaronmk
    # Place in new table for speed and so don't modify input if values edited
1162 2584 aaronmk
    in_table = sql_gen.Table('in')
1163 2702 aaronmk
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins, in_cols,
1164
        preserve=[in_pkey_col], start=0))
1165 2395 aaronmk
    input_joins = [in_table]
1166 2486 aaronmk
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
1167 2395 aaronmk
1168 2656 aaronmk
    mapping = sql_gen.ColDict(db, out_table, mapping)
1169
        # after applying dicts.join() because that returns a plain dict
1170
1171 2509 aaronmk
    # Resolve default value column
1172
    try: default = mapping[default]
1173
    except KeyError:
1174
        if default != None:
1175
            db.log_debug('Default value column '
1176
                +strings.as_tt(strings.repr_no_u(default))
1177 2511 aaronmk
                +' does not exist in mapping, falling back to None', level=2.1)
1178 2509 aaronmk
            default = None
1179
1180 2387 aaronmk
    pkeys_names = [in_pkey, out_pkey]
1181 2236 aaronmk
    pkeys_cols = [in_pkey_col, out_pkey_col]
1182
1183 2201 aaronmk
    pkeys_table_exists_ref = [False]
1184 2420 aaronmk
    def insert_into_pkeys(joins, cols):
1185 2786 aaronmk
        query = mk_select(db, joins, cols, order_by=None, start=0)
1186 2201 aaronmk
        if pkeys_table_exists_ref[0]:
1187 2786 aaronmk
            insert_select(db, into, pkeys_names, query)
1188 2201 aaronmk
        else:
1189 2786 aaronmk
            run_query_into(db, query, into=into)
1190 2201 aaronmk
            pkeys_table_exists_ref[0] = True
1191
1192 2429 aaronmk
    limit_ref = [None]
1193 2380 aaronmk
    conds = set()
1194 2233 aaronmk
    distinct_on = []
1195 2325 aaronmk
    def mk_main_select(joins, cols):
1196 2429 aaronmk
        return mk_select(db, joins, cols, conds, distinct_on,
1197
            limit=limit_ref[0], start=0)
1198 2132 aaronmk
1199 2519 aaronmk
    exc_strs = set()
1200 2309 aaronmk
    def log_exc(e):
1201 2519 aaronmk
        e_str = exc.str_(e, first_line_only=True)
1202
        log_debug('Caught exception: '+e_str)
1203
        assert e_str not in exc_strs # avoid infinite loops
1204
        exc_strs.add(e_str)
1205 2735 aaronmk
1206 2451 aaronmk
    def remove_all_rows():
1207 2450 aaronmk
        log_debug('Returning NULL for all rows')
1208 2429 aaronmk
        limit_ref[0] = 0 # just create an empty pkeys table
1209 2735 aaronmk
1210 2758 aaronmk
    def ignore(in_col, value, e):
1211
        track_data_error(db, errors_table_, in_col.srcs, value, e.cause.pgcode,
1212
            e.cause.pgerror)
1213
1214 2545 aaronmk
        in_col_str = strings.as_tt(repr(in_col))
1215 2544 aaronmk
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
1216
            level=2.5)
1217 2537 aaronmk
        add_index(db, in_col)
1218 2735 aaronmk
1219 2545 aaronmk
        log_debug('Ignoring rows with '+in_col_str+' = '
1220
            +strings.as_tt(repr(value)))
1221 2758 aaronmk
    def remove_rows(in_col, value, e):
1222
        ignore(in_col, value, e)
1223 2378 aaronmk
        cond = (in_col, sql_gen.CompareCond(value, '!='))
1224
        assert cond not in conds # avoid infinite loops
1225 2380 aaronmk
        conds.add(cond)
1226 2758 aaronmk
    def invalid2null(in_col, value, e):
1227
        ignore(in_col, value, e)
1228 2403 aaronmk
        update(db, in_table, [(in_col, None)],
1229
            sql_gen.ColValueCond(in_col, value))
1230 2245 aaronmk
1231 2589 aaronmk
    def insert_pkeys_table(which):
1232
        return sql_gen.Table(sql_gen.add_suffix(in_table.name,
1233
            '_insert_'+which+'_pkeys'))
1234
    insert_out_pkeys = insert_pkeys_table('out')
1235
    insert_in_pkeys = insert_pkeys_table('in')
1236
1237 2206 aaronmk
    # Do inserts and selects
1238 2642 aaronmk
    join_cols = sql_gen.ColDict(db, out_table)
1239 2206 aaronmk
    while True:
1240 2521 aaronmk
        if limit_ref[0] == 0: # special case
1241
            log_debug('Creating an empty pkeys table')
1242 2786 aaronmk
            cur = run_query_into(db, mk_select(db, out_table, [out_pkey],
1243 2521 aaronmk
                limit=limit_ref[0]), into=insert_out_pkeys)
1244
            break # don't do main case
1245
1246 2303 aaronmk
        has_joins = join_cols != {}
1247
1248 2305 aaronmk
        # Prepare to insert new rows
1249 2325 aaronmk
        insert_joins = input_joins[:] # don't modify original!
1250 2403 aaronmk
        insert_args = dict(recover=True, cacheable=False)
1251 2303 aaronmk
        if has_joins:
1252 2317 aaronmk
            distinct_on = [v.to_Col() for v in join_cols.values()]
1253 2325 aaronmk
            insert_joins.append(sql_gen.Join(out_table, join_cols,
1254
                sql_gen.filter_out))
1255
        else:
1256 2404 aaronmk
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1257 2786 aaronmk
        main_select = mk_main_select(insert_joins, mapping.values())
1258 2303 aaronmk
1259 2486 aaronmk
        log_debug('Trying to insert new rows')
1260 2206 aaronmk
        try:
1261 2518 aaronmk
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1262
                **insert_args)
1263 2357 aaronmk
            break # insert successful
1264 2206 aaronmk
        except DuplicateKeyException, e:
1265 2309 aaronmk
            log_exc(e)
1266
1267 2258 aaronmk
            old_join_cols = join_cols.copy()
1268 2565 aaronmk
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1269 2486 aaronmk
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1270 2505 aaronmk
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1271 2258 aaronmk
            assert join_cols != old_join_cols # avoid infinite loops
1272 2230 aaronmk
        except NullValueException, e:
1273 2309 aaronmk
            log_exc(e)
1274
1275 2230 aaronmk
            out_col, = e.cols
1276
            try: in_col = mapping[out_col]
1277 2356 aaronmk
            except KeyError:
1278 2486 aaronmk
                log_debug('Missing mapping for NOT NULL column '+out_col)
1279 2451 aaronmk
                remove_all_rows()
1280 2758 aaronmk
            else: remove_rows(in_col, None, e)
1281 2542 aaronmk
        except FunctionValueException, e:
1282
            log_exc(e)
1283
1284
            func_name = e.name
1285
            value = e.value
1286
            for out_col, in_col in mapping.iteritems():
1287 2758 aaronmk
                in_col = sql_gen.unwrap_func_call(in_col, func_name)
1288
                invalid2null(in_col, value, e)
1289 2525 aaronmk
        except MissingCastException, e:
1290
            log_exc(e)
1291
1292
            out_col = e.col
1293 2706 aaronmk
            type_ = e.type
1294
1295 2724 aaronmk
            log_debug('Casting '+strings.as_tt(out_col)+' input to '
1296
                +strings.as_tt(type_))
1297 2735 aaronmk
            def wrap_func(col): return cast(db, type_, col, errors_table_)
1298 2705 aaronmk
            mapping[out_col] = sql_gen.wrap(wrap_func, mapping[out_col])
1299 2429 aaronmk
        except DatabaseErrors, e:
1300
            log_exc(e)
1301
1302 2531 aaronmk
            msg = 'No handler for exception: '+exc.str_(e)
1303 2451 aaronmk
            warnings.warn(DbWarning(msg))
1304
            log_debug(msg)
1305
            remove_all_rows()
1306 2358 aaronmk
        # after exception handled, rerun loop with additional constraints
1307 2132 aaronmk
1308 2357 aaronmk
    if row_ct_ref != None and cur.rowcount >= 0:
1309
        row_ct_ref[0] += cur.rowcount
1310
1311
    if has_joins:
1312
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1313 2486 aaronmk
        log_debug('Getting output table pkeys of existing/inserted rows')
1314 2420 aaronmk
        insert_into_pkeys(select_joins, pkeys_cols)
1315 2357 aaronmk
    else:
1316 2404 aaronmk
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1317 2357 aaronmk
1318 2486 aaronmk
        log_debug('Getting input table pkeys of inserted rows')
1319 2786 aaronmk
        run_query_into(db, mk_main_select(input_joins, [in_pkey]),
1320 2404 aaronmk
            into=insert_in_pkeys)
1321
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1322 2357 aaronmk
1323 2428 aaronmk
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1324
            insert_in_pkeys)
1325
1326 2486 aaronmk
        log_debug('Combining output and input pkeys in inserted order')
1327 2404 aaronmk
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1328 2357 aaronmk
            {row_num_col: sql_gen.join_same_not_null})]
1329 2420 aaronmk
        insert_into_pkeys(pkey_joins, pkeys_names)
1330 2357 aaronmk
1331 2486 aaronmk
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1332 2594 aaronmk
    add_pkey(db, into)
1333 2407 aaronmk
1334 2508 aaronmk
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1335 2489 aaronmk
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1336 2357 aaronmk
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1337
        # must use join_same_not_null or query will take forever
1338 2420 aaronmk
    insert_into_pkeys(missing_rows_joins,
1339 2508 aaronmk
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1340 2357 aaronmk
1341 2489 aaronmk
    assert table_row_count(db, into) == table_row_count(db, in_table)
1342 2428 aaronmk
1343 2702 aaronmk
    srcs = []
1344
    if is_func: srcs = sql_gen.cols_srcs(in_cols)
1345
    return sql_gen.Col(out_pkey, into, srcs)
1346 2115 aaronmk
1347
##### Data cleanup
1348
1349 2290 aaronmk
def cleanup_table(db, table, cols):
1350 2677 aaronmk
    table = sql_gen.as_Table(table)
1351
    cols = map(sql_gen.as_Col, cols)
1352 2115 aaronmk
1353 2677 aaronmk
    expr = ('nullif(nullif(trim(both from %s), '+db.esc_value('')+'), '
1354
        +db.esc_value(r'\N')+')')
1355
    changes = [(v, sql_gen.CustomCode(expr % v.to_str(db)))
1356
        for v in cols]
1357 2115 aaronmk
1358 2677 aaronmk
    update(db, table, changes)