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1 11 aaronmk
# Database access
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import copy
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import operator
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import re
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import warnings
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import exc
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import dicts
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import iters
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import lists
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from Proxy import Proxy
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import rand
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import sql_gen
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import strings
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import util
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##### Exceptions
19
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def get_cur_query(cur, input_query=None):
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    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
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25
    if raw_query != None: return raw_query
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    else: return '[input] '+strings.ustr(input_query)
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def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
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    exc.add_msg(e, 'query: '+strings.ustr(get_cur_query(*args, **kw_args)))
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class DbException(exc.ExceptionWithCause):
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    def __init__(self, msg, cause=None, cur=None):
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        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
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        if cur != None: _add_cursor_info(self, cur)
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class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
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        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
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        self.name = name
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class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
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        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
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        self.name = name
47
        self.value = value
48
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class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
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        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
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        self.name = name
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        self.cols = cols
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class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62
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class NameException(DbException): pass
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class DuplicateKeyException(ConstraintException): pass
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class NullValueException(ConstraintException): pass
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class FunctionValueException(ExceptionWithNameValue): pass
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class DuplicateTableException(ExceptionWithName): pass
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class DuplicateFunctionException(ExceptionWithName): pass
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class EmptyRowException(DbException): pass
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##### Warnings
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class DbWarning(UserWarning): pass
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##### Result retrieval
82
83
def col_names(cur): return (col[0] for col in cur.description)
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def rows(cur): return iter(lambda: cur.fetchone(), None)
86
87
def consume_rows(cur):
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    '''Used to fetch all rows so result will be cached'''
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    iters.consume_iter(rows(cur))
90
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def next_row(cur): return rows(cur).next()
92
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
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    return row_
97
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def next_value(cur): return next_row(cur)[0]
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def value(cur): return row(cur)[0]
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def values(cur): return iters.func_iter(lambda: next_value(cur))
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def value_or_none(cur):
105
    try: return value(cur)
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    except StopIteration: return None
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##### Escaping
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def esc_name_by_module(module, name):
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    if module == 'psycopg2' or module == None: quote = '"'
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    elif module == 'MySQLdb': quote = '`'
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    else: raise NotImplementedError("Can't escape name for "+module+' database')
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    return sql_gen.esc_name(name, quote)
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def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
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119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
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def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
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##### Database connections
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db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
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db_engines = {
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    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
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    'PostgreSQL': ('psycopg2', {}),
135
}
136
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DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
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def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
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log_debug_none = lambda msg, level=2: None
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class DbConn:
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    def __init__(self, db_config, serializable=True, autocommit=False,
152
        caching=True, log_debug=log_debug_none):
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        self.db_config = db_config
154
        self.serializable = serializable
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        self.autocommit = autocommit
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        self.caching = caching
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        self.log_debug = log_debug
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        self.debug = log_debug != log_debug_none
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        self.__db = None
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        self.query_results = {}
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        self._savepoint = 0
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        self._notices_seen = set()
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    def __getattr__(self, name):
166
        if name == '__dict__': raise Exception('getting __dict__')
167
        if name == 'db': return self._db()
168
        else: raise AttributeError()
169
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    def __getstate__(self):
171
        state = copy.copy(self.__dict__) # shallow copy
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        state['log_debug'] = None # don't pickle the debug callback
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        state['_DbConn__db'] = None # don't pickle the connection
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        return state
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    def connected(self): return self.__db != None
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    def _db(self):
179
        if self.__db == None:
180
            # Process db_config
181
            db_config = self.db_config.copy() # don't modify input!
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            schemas = db_config.pop('schemas', None)
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            module_name, mappings = db_engines[db_config.pop('engine')]
184
            module = __import__(module_name)
185
            _add_module(module)
186
            for orig, new in mappings.iteritems():
187
                try: util.rename_key(db_config, orig, new)
188
                except KeyError: pass
189
190
            # Connect
191
            self.__db = module.connect(**db_config)
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            # Configure connection
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            if self.serializable and not self.autocommit: self.run_query(
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                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE', log_level=4)
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            if schemas != None:
197
                schemas_ = ''.join((esc_name(self, s)+', '
198
                    for s in schemas.split(',')))
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                self.run_query("SELECT set_config('search_path', "
200
                    +self.esc_value(schemas_)
201
                    +" || current_setting('search_path'), false)", log_level=3)
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        return self.__db
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    class DbCursor(Proxy):
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        def __init__(self, outer):
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            Proxy.__init__(self, outer.db.cursor())
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            self.outer = outer
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            self.query_results = outer.query_results
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            self.query_lookup = None
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            self.result = []
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        def execute(self, query):
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            self._is_insert = query.startswith('INSERT')
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            self.query_lookup = query
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            try:
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                try:
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                    cur = self.inner.execute(query)
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                    self.outer.do_autocommit()
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                finally: self.query = get_cur_query(self.inner, query)
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            except Exception, e:
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                _add_cursor_info(e, self, query)
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                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
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            if self.rowcount == 0 and query.startswith('SELECT'): # empty SELECT
227
                consume_rows(self) # fetch all rows so result will be cached
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            return cur
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        def fetchone(self):
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            row = self.inner.fetchone()
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            if row != None: self.result.append(row)
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            # otherwise, fetched all rows
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            else: self._cache_result()
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            return row
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        def _cache_result(self):
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            # For inserts, only cache exceptions since inserts are not
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            # idempotent, but an invalid insert will always be invalid
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            if self.query_results != None and (not self._is_insert
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                or isinstance(self.result, Exception)):
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                assert self.query_lookup != None
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                self.query_results[self.query_lookup] = self.CacheCursor(
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                    util.dict_subset(dicts.AttrsDictView(self),
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                    ['query', 'result', 'rowcount', 'description']))
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        class CacheCursor:
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            def __init__(self, cached_result): self.__dict__ = cached_result
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            def execute(self, *args, **kw_args):
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                if isinstance(self.result, Exception): raise self.result
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                # otherwise, result is a rows list
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                self.iter = iter(self.result)
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            def fetchone(self):
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                try: return self.iter.next()
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                except StopIteration: return None
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    def esc_value(self, value):
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        try: str_ = self.mogrify('%s', [value])
262
        except NotImplementedError, e:
263
            module = util.root_module(self.db)
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            if module == 'MySQLdb':
265
                import _mysql
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                str_ = _mysql.escape_string(value)
267
            else: raise e
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        return strings.to_unicode(str_)
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    def esc_name(self, name): return esc_name(self, name) # calls global func
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    def std_code(self, str_):
273
        '''Standardizes SQL code.
274
        * Ensures that string literals are prefixed by `E`
275
        '''
276
        if str_.startswith("'"): str_ = 'E'+str_
277
        return str_
278
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    def can_mogrify(self):
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        module = util.root_module(self.db)
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        return module == 'psycopg2'
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    def mogrify(self, query, params=None):
284
        if self.can_mogrify(): return self.db.cursor().mogrify(query, params)
285
        else: raise NotImplementedError("Can't mogrify query")
286
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    def print_notices(self):
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        if hasattr(self.db, 'notices'):
289
            for msg in self.db.notices:
290
                if msg not in self._notices_seen:
291
                    self._notices_seen.add(msg)
292
                    self.log_debug(msg, level=2)
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    def run_query(self, query, cacheable=False, log_level=2,
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        debug_msg_ref=None):
296 2445 aaronmk
        '''
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        @param log_ignore_excs The log_level will be increased by 2 if the query
298
            throws one of these exceptions.
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        @param debug_msg_ref If specified, the log message will be returned in
300
            this instead of being output. This allows you to filter log messages
301
            depending on the result of the query.
302 2445 aaronmk
        '''
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        assert query != None
304
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        if not self.caching: cacheable = False
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        used_cache = False
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308
        def log_msg(query):
309
            if used_cache: cache_status = 'cache hit'
310
            elif cacheable: cache_status = 'cache miss'
311
            else: cache_status = 'non-cacheable'
312
            return 'DB query: '+cache_status+':\n'+strings.as_code(query, 'SQL')
313
314 1903 aaronmk
        try:
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            # Get cursor
316
            if cacheable:
317
                try:
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                    cur = self.query_results[query]
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                    used_cache = True
320
                except KeyError: cur = self.DbCursor(self)
321
            else: cur = self.db.cursor()
322
323 2664 aaronmk
            # Log query
324
            if self.debug and debug_msg_ref == None: # log before running
325
                self.log_debug(log_msg(query), log_level)
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            # Run query
328 2793 aaronmk
            cur.execute(query)
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        finally:
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            self.print_notices()
331 2664 aaronmk
            if self.debug and debug_msg_ref != None: # return after running
332 2793 aaronmk
                debug_msg_ref[0] = log_msg(str(get_cur_query(cur, query)))
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334
        return cur
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    def is_cached(self, query): return query in self.query_results
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    def with_autocommit(self, func, autocommit=True):
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        import psycopg2.extensions
340
        if autocommit:
341
            isolation_level = psycopg2.extensions.ISOLATION_LEVEL_AUTOCOMMIT
342
        else: isolation_level = psycopg2.extensions.ISOLATION_LEVEL_SERIALIZABLE
343
344
        prev_isolation_level = self.db.isolation_level
345
        self.db.set_isolation_level(isolation_level)
346 2683 aaronmk
        try: return func()
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        finally: self.db.set_isolation_level(prev_isolation_level)
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    def with_savepoint(self, func):
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        savepoint = 'level_'+str(self._savepoint)
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        self.run_query('SAVEPOINT '+savepoint, log_level=4)
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        self._savepoint += 1
353 2683 aaronmk
        try:
354 2139 aaronmk
            try: return_val = func()
355
            finally:
356
                self._savepoint -= 1
357
                assert self._savepoint >= 0
358
        except:
359 2443 aaronmk
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
360 2139 aaronmk
            raise
361
        else:
362 2443 aaronmk
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
363 2191 aaronmk
            self.do_autocommit()
364 2139 aaronmk
            return return_val
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366
    def do_autocommit(self):
367
        '''Autocommits if outside savepoint'''
368
        assert self._savepoint >= 0
369
        if self.autocommit and self._savepoint == 0:
370 2668 aaronmk
            self.log_debug('Autocommitting')
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            self.db.commit()
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373
    def col_default(self, col):
374
        table = sql_gen.Table('columns', 'information_schema')
375
376
        conds = [('table_name', col.table.name), ('column_name', col.name)]
377
        schema = col.table.schema
378
        if schema != None: conds.append(('table_schema', schema))
379
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        return sql_gen.as_Code(value(select(self, table, ['column_default'],
381
            conds, order_by='table_schema', limit=1, log_level=3)))
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            # TODO: order_by search_path schema order
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connect = DbConn
385
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##### Recoverable querying
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def with_savepoint(db, func): return db.with_savepoint(func)
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def run_query(db, query, recover=None, cacheable=False, log_level=2,
391
    log_ignore_excs=None, **kw_args):
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    '''For params, see DbConn.run_query()'''
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    if recover == None: recover = False
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    if log_ignore_excs == None: log_ignore_excs = ()
395
    log_ignore_excs = tuple(log_ignore_excs)
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    debug_msg_ref = None # usually, db.run_query() logs query before running it
398
    # But if filtering with log_ignore_excs, wait until after exception parsing
399
    if log_ignore_excs != () or not db.can_mogrify(): debug_msg_ref = [None]
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401 2148 aaronmk
    try:
402 2464 aaronmk
        try:
403 2794 aaronmk
            def run(): return db.run_query(query, cacheable, log_level,
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                debug_msg_ref, **kw_args)
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            if recover and not db.is_cached(query):
406 2464 aaronmk
                return with_savepoint(db, run)
407
            else: return run() # don't need savepoint if cached
408
        except Exception, e:
409
            if not recover: raise # need savepoint to run index_cols()
410
            msg = exc.str_(e)
411
412
            match = re.search(r'duplicate key value violates unique constraint '
413 2493 aaronmk
                r'"((_?[^\W_]+)_.+?)"', msg)
414 2464 aaronmk
            if match:
415
                constraint, table = match.groups()
416
                try: cols = index_cols(db, table, constraint)
417
                except NotImplementedError: raise e
418
                else: raise DuplicateKeyException(constraint, cols, e)
419
420 2493 aaronmk
            match = re.search(r'null value in column "(.+?)" violates not-null'
421 2464 aaronmk
                r' constraint', msg)
422
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
423
424
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
425
                r'|date/time field value out of range): "(.+?)"\n'
426 2535 aaronmk
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
427 2464 aaronmk
            if match:
428
                value, name = match.groups()
429
                raise FunctionValueException(name, strings.to_unicode(value), e)
430
431 2526 aaronmk
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
432 2523 aaronmk
                r'is of type', msg)
433
            if match:
434
                col, type_ = match.groups()
435
                raise MissingCastException(type_, col, e)
436
437 2493 aaronmk
            match = re.search(r'relation "(.+?)" already exists', msg)
438 2464 aaronmk
            if match: raise DuplicateTableException(match.group(1), e)
439
440 2493 aaronmk
            match = re.search(r'function "(.+?)" already exists', msg)
441 2464 aaronmk
            if match: raise DuplicateFunctionException(match.group(1), e)
442
443
            raise # no specific exception raised
444
    except log_ignore_excs:
445
        log_level += 2
446
        raise
447
    finally:
448 2666 aaronmk
        if debug_msg_ref != None and debug_msg_ref[0] != None:
449
            db.log_debug(debug_msg_ref[0], log_level)
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##### Basic queries
452
453 2153 aaronmk
def next_version(name):
454 2163 aaronmk
    version = 1 # first existing name was version 0
455 2586 aaronmk
    match = re.match(r'^(.*)#(\d+)$', name)
456 2153 aaronmk
    if match:
457 2586 aaronmk
        name, version = match.groups()
458
        version = int(version)+1
459 2588 aaronmk
    return sql_gen.add_suffix(name, '#'+str(version))
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461 2789 aaronmk
def run_query_into(db, query, into=None, add_indexes_=False, **kw_args):
462 2085 aaronmk
    '''Outputs a query to a temp table.
463
    For params, see run_query().
464
    '''
465 2789 aaronmk
    if into == None: return run_query(db, query, **kw_args)
466 2790 aaronmk
467
    assert isinstance(into, sql_gen.Table)
468
469
    kw_args['recover'] = True
470
    kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
471
472
    temp = not db.autocommit # tables are permanent in autocommit mode
473
    # "temporary tables cannot specify a schema name", so remove schema
474
    if temp: into.schema = None
475
476
    # Create table
477
    while True:
478
        create_query = 'CREATE'
479
        if temp: create_query += ' TEMP'
480
        create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
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482 2790 aaronmk
        try:
483
            cur = run_query(db, create_query, **kw_args)
484
                # CREATE TABLE AS sets rowcount to # rows in query
485
            break
486
        except DuplicateTableException, e:
487
            into.name = next_version(into.name)
488
            # try again with next version of name
489
490
    if add_indexes_: add_indexes(db, into)
491
492
    return cur
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order_by_pkey = object() # tells mk_select() to order by the pkey
495
496 2199 aaronmk
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
497
498 2233 aaronmk
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
499 2293 aaronmk
    start=None, order_by=order_by_pkey, default_table=None):
500 1981 aaronmk
    '''
501 2121 aaronmk
    @param tables The single table to select from, or a list of tables to join
502 2280 aaronmk
        together, with tables after the first being sql_gen.Join objects
503 1981 aaronmk
    @param fields Use None to select all fields in the table
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    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
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        * container can be any iterable type
506 2399 aaronmk
        * compare_left_side: sql_gen.Code|str (for col name)
507
        * compare_right_side: sql_gen.ValueCond|literal value
508 2199 aaronmk
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
509
        use all columns
510 2786 aaronmk
    @return query
511 1981 aaronmk
    '''
512 2315 aaronmk
    # Parse tables param
513 2121 aaronmk
    if not lists.is_seq(tables): tables = [tables]
514 2141 aaronmk
    tables = list(tables) # don't modify input! (list() copies input)
515 2315 aaronmk
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
516 2121 aaronmk
517 2315 aaronmk
    # Parse other params
518 2376 aaronmk
    if conds == None: conds = []
519 2650 aaronmk
    elif dicts.is_dict(conds): conds = conds.items()
520 2379 aaronmk
    conds = list(conds) # don't modify input! (list() copies input)
521 135 aaronmk
    assert limit == None or type(limit) == int
522 865 aaronmk
    assert start == None or type(start) == int
523 2315 aaronmk
    if order_by is order_by_pkey:
524
        if distinct_on != []: order_by = None
525
        else: order_by = pkey(db, table0, recover=True)
526 865 aaronmk
527 2315 aaronmk
    query = 'SELECT'
528 2056 aaronmk
529 2315 aaronmk
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
530 2056 aaronmk
531 2200 aaronmk
    # DISTINCT ON columns
532 2233 aaronmk
    if distinct_on != []:
533 2467 aaronmk
        query += '\nDISTINCT'
534 2254 aaronmk
        if distinct_on is not distinct_on_all:
535 2200 aaronmk
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
536
537
    # Columns
538 2467 aaronmk
    query += '\n'
539 1135 aaronmk
    if fields == None: query += '*'
540 2765 aaronmk
    else:
541
        assert fields != []
542
        query += '\n, '.join(map(parse_col, fields))
543 2200 aaronmk
544
    # Main table
545 2467 aaronmk
    query += '\nFROM '+table0.to_str(db)
546 865 aaronmk
547 2122 aaronmk
    # Add joins
548 2271 aaronmk
    left_table = table0
549 2263 aaronmk
    for join_ in tables:
550
        table = join_.table
551 2238 aaronmk
552 2343 aaronmk
        # Parse special values
553
        if join_.type_ is sql_gen.filter_out: # filter no match
554 2376 aaronmk
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
555
                None))
556 2343 aaronmk
557 2467 aaronmk
        query += '\n'+join_.to_str(db, left_table)
558 2122 aaronmk
559
        left_table = table
560
561 865 aaronmk
    missing = True
562 2376 aaronmk
    if conds != []:
563 2576 aaronmk
        if len(conds) == 1: whitespace = ' '
564
        else: whitespace = '\n'
565 2578 aaronmk
        query += '\n'+sql_gen.combine_conds([sql_gen.ColValueCond(l, r)
566
            .to_str(db) for l, r in conds], 'WHERE')
567 865 aaronmk
        missing = False
568 2227 aaronmk
    if order_by != None:
569 2467 aaronmk
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
570
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
571 865 aaronmk
    if start != None:
572 2467 aaronmk
        if start != 0: query += '\nOFFSET '+str(start)
573 865 aaronmk
        missing = False
574
    if missing: warnings.warn(DbWarning(
575
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
576
577 2786 aaronmk
    return query
578 11 aaronmk
579 2054 aaronmk
def select(db, *args, **kw_args):
580
    '''For params, see mk_select() and run_query()'''
581
    recover = kw_args.pop('recover', None)
582
    cacheable = kw_args.pop('cacheable', True)
583 2442 aaronmk
    log_level = kw_args.pop('log_level', 2)
584 2054 aaronmk
585 2791 aaronmk
    return run_query(db, mk_select(db, *args, **kw_args), recover, cacheable,
586
        log_level=log_level)
587 2054 aaronmk
588 2788 aaronmk
def mk_insert_select(db, table, cols=None, select_query=None, returning=None,
589
    embeddable=False):
590 1960 aaronmk
    '''
591
    @param returning str|None An inserted column (such as pkey) to return
592 2070 aaronmk
    @param embeddable Whether the query should be embeddable as a nested SELECT.
593 2073 aaronmk
        Warning: If you set this and cacheable=True when the query is run, the
594
        query will be fully cached, not just if it raises an exception.
595 1960 aaronmk
    '''
596 2754 aaronmk
    table = sql_gen.remove_table_rename(sql_gen.as_Table(table))
597 2318 aaronmk
    if cols == []: cols = None # no cols (all defaults) = unknown col names
598 2646 aaronmk
    if cols != None:
599
        cols = [sql_gen.to_name_only_col(v, table).to_str(db) for v in cols]
600 2063 aaronmk
    if select_query == None: select_query = 'DEFAULT VALUES'
601 2327 aaronmk
    if returning != None: returning = sql_gen.as_Col(returning, table)
602 2063 aaronmk
603
    # Build query
604 2497 aaronmk
    first_line = 'INSERT INTO '+table.to_str(db)
605
    query = first_line
606 2467 aaronmk
    if cols != None: query += '\n('+', '.join(cols)+')'
607
    query += '\n'+select_query
608 2063 aaronmk
609
    if returning != None:
610 2743 aaronmk
        query += '\nRETURNING '+sql_gen.to_name_only_col(returning).to_str(db)
611 2063 aaronmk
612 2070 aaronmk
    if embeddable:
613 2327 aaronmk
        assert returning != None
614
615 2070 aaronmk
        # Create function
616 2513 aaronmk
        function_name = sql_gen.clean_name(first_line)
617 2327 aaronmk
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
618 2189 aaronmk
        while True:
619
            try:
620 2698 aaronmk
                function = sql_gen.TempFunction(function_name, db.autocommit)
621 2194 aaronmk
622 2189 aaronmk
                function_query = '''\
623 2698 aaronmk
CREATE FUNCTION '''+function.to_str(db)+'''()
624 2467 aaronmk
RETURNS '''+return_type+'''
625
LANGUAGE sql
626
AS $$
627 2788 aaronmk
'''+query+''';
628 2467 aaronmk
$$;
629 2070 aaronmk
'''
630 2446 aaronmk
                run_query(db, function_query, recover=True, cacheable=True,
631 2464 aaronmk
                    log_ignore_excs=(DuplicateFunctionException,))
632 2189 aaronmk
                break # this version was successful
633
            except DuplicateFunctionException, e:
634
                function_name = next_version(function_name)
635
                # try again with next version of name
636 2070 aaronmk
637 2337 aaronmk
        # Return query that uses function
638 2698 aaronmk
        func_table = sql_gen.NamedTable('f', sql_gen.FunctionCall(function),
639 2742 aaronmk
            [returning]) # AS clause requires function alias
640 2787 aaronmk
        return mk_select(db, func_table, start=0, order_by=None)
641 2070 aaronmk
642 2787 aaronmk
    return query
643 2066 aaronmk
644
def insert_select(db, *args, **kw_args):
645 2085 aaronmk
    '''For params, see mk_insert_select() and run_query_into()
646 2386 aaronmk
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
647
        values in
648 2072 aaronmk
    '''
649 2386 aaronmk
    into = kw_args.pop('into', None)
650
    if into != None: kw_args['embeddable'] = True
651 2066 aaronmk
    recover = kw_args.pop('recover', None)
652
    cacheable = kw_args.pop('cacheable', True)
653 2673 aaronmk
    log_level = kw_args.pop('log_level', 2)
654 2066 aaronmk
655 2789 aaronmk
    return run_query_into(db, mk_insert_select(db, *args, **kw_args), into,
656 2787 aaronmk
        recover=recover, cacheable=cacheable, log_level=log_level)
657 2063 aaronmk
658 2738 aaronmk
default = sql_gen.default # tells insert() to use the default value for a column
659 2066 aaronmk
660 2063 aaronmk
def insert(db, table, row, *args, **kw_args):
661 2085 aaronmk
    '''For params, see insert_select()'''
662 1960 aaronmk
    if lists.is_seq(row): cols = None
663
    else:
664
        cols = row.keys()
665
        row = row.values()
666 2738 aaronmk
    row = list(row) # ensure that "== []" works
667 1960 aaronmk
668 2738 aaronmk
    if row == []: query = None
669
    else: query = sql_gen.Values(row).to_str(db)
670 1961 aaronmk
671 2788 aaronmk
    return insert_select(db, table, cols, query, *args, **kw_args)
672 11 aaronmk
673 2402 aaronmk
def mk_update(db, table, changes=None, cond=None):
674
    '''
675
    @param changes [(col, new_value),...]
676
        * container can be any iterable type
677
        * col: sql_gen.Code|str (for col name)
678
        * new_value: sql_gen.Code|literal value
679
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
680
    @return str query
681
    '''
682
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
683 2405 aaronmk
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
684 2402 aaronmk
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
685 2467 aaronmk
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
686 2402 aaronmk
687
    return query
688
689
def update(db, *args, **kw_args):
690
    '''For params, see mk_update() and run_query()'''
691
    recover = kw_args.pop('recover', None)
692
693 2791 aaronmk
    return run_query(db, mk_update(db, *args, **kw_args), recover)
694 2402 aaronmk
695 135 aaronmk
def last_insert_id(db):
696 1849 aaronmk
    module = util.root_module(db.db)
697 135 aaronmk
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
698
    elif module == 'MySQLdb': return db.insert_id()
699
    else: return None
700 13 aaronmk
701 2394 aaronmk
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
702 2383 aaronmk
    '''Creates a mapping from original column names (which may have collisions)
703 2415 aaronmk
    to names that will be distinct among the columns' tables.
704 2383 aaronmk
    This is meant to be used for several tables that are being joined together.
705 2415 aaronmk
    @param cols The columns to combine. Duplicates will be removed.
706
    @param into The table for the new columns.
707 2394 aaronmk
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
708
        columns will be included in the mapping even if they are not in cols.
709
        The tables of the provided Col objects will be changed to into, so make
710
        copies of them if you want to keep the original tables.
711
    @param as_items Whether to return a list of dict items instead of a dict
712 2383 aaronmk
    @return dict(orig_col=new_col, ...)
713
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
714 2392 aaronmk
        * new_col: sql_gen.Col(orig_col_name, into)
715
        * All mappings use the into table so its name can easily be
716 2383 aaronmk
          changed for all columns at once
717
    '''
718 2415 aaronmk
    cols = lists.uniqify(cols)
719
720 2394 aaronmk
    items = []
721 2389 aaronmk
    for col in preserve:
722 2390 aaronmk
        orig_col = copy.copy(col)
723 2392 aaronmk
        col.table = into
724 2394 aaronmk
        items.append((orig_col, col))
725
    preserve = set(preserve)
726
    for col in cols:
727 2716 aaronmk
        if col not in preserve:
728
            items.append((col, sql_gen.Col(str(col), into, col.srcs)))
729 2394 aaronmk
730
    if not as_items: items = dict(items)
731
    return items
732 2383 aaronmk
733 2393 aaronmk
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
734 2391 aaronmk
    '''For params, see mk_flatten_mapping()
735
    @return See return value of mk_flatten_mapping()
736
    '''
737 2394 aaronmk
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
738
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
739 2786 aaronmk
    run_query_into(db, mk_select(db, joins, cols, limit=limit, start=start),
740 2392 aaronmk
        into=into)
741 2394 aaronmk
    return dict(items)
742 2391 aaronmk
743 2751 aaronmk
def mk_track_data_error(db, errors_table, cols, value, error_code, error):
744 2810 aaronmk
    assert cols != ()
745
746 2751 aaronmk
    cols = map(sql_gen.to_name_only_col, cols)
747
748
    columns_cols = ['column']
749
    columns = sql_gen.NamedValues('columns', columns_cols,
750
        [[c.name] for c in cols])
751
    values_cols = ['value', 'error_code', 'error']
752
    values = sql_gen.NamedValues('values', values_cols,
753
        [value, error_code, error])
754
755
    select_cols = columns_cols+values_cols
756
    name_only_cols = map(sql_gen.to_name_only_col, select_cols)
757 2755 aaronmk
    errors_table = sql_gen.NamedTable('errors', errors_table)
758 2751 aaronmk
    joins = [columns, sql_gen.Join(values, type_='CROSS'),
759
        sql_gen.Join(errors_table, dict(zip(name_only_cols, select_cols)),
760
        sql_gen.filter_out)]
761
762
    return mk_insert_select(db, errors_table, name_only_cols,
763 2787 aaronmk
        mk_select(db, joins, select_cols, order_by=None))
764 2751 aaronmk
765 2810 aaronmk
def track_data_error(db, errors_table, cols, *args, **kw_args):
766 2758 aaronmk
    '''
767
    @param errors_table If None, does nothing.
768
    '''
769 2810 aaronmk
    if errors_table == None or cols == (): return
770
    run_query(db, mk_track_data_error(db, errors_table, cols, *args, **kw_args),
771 2758 aaronmk
        cacheable=True, log_level=4)
772
773 2704 aaronmk
def cast(db, type_, col, errors_table=None):
774
    '''Casts an (unrenamed) column or value.
775 2769 aaronmk
    If errors_table set and col has srcs, saves errors in errors_table (using
776
    col's srcs attr as the source columns) and converts errors to warnings.
777 2704 aaronmk
    @param col sql_gen.Col|sql_gen.Literal
778
    @param errors_table None|sql_gen.Table|str
779
    '''
780 2769 aaronmk
    save_errors = (errors_table != None and isinstance(col, sql_gen.Col)
781
        and col.srcs != ())
782
    if not save_errors: # can't save errors
783
        return sql_gen.CustomCode(col.to_str(db)+'::'+type_) # just cast
784 2704 aaronmk
785
    assert not isinstance(col, sql_gen.NamedCol)
786
787 2770 aaronmk
    errors_table = sql_gen.as_Table(errors_table)
788
    srcs = map(sql_gen.to_name_only_col, col.srcs)
789
    function_name = str(sql_gen.FunctionCall(type_, *srcs))
790 2704 aaronmk
    function = sql_gen.TempFunction(function_name, db.autocommit)
791
792 2718 aaronmk
    while True:
793
        # Create function definition
794
        query = '''\
795 2704 aaronmk
CREATE FUNCTION '''+function.to_str(db)+'''(value text)
796
RETURNS '''+type_+'''
797
LANGUAGE plpgsql
798
STRICT
799
AS $$
800
BEGIN
801
    /* The explicit cast to the return type is needed to make the cast happen
802
    inside the try block. (Implicit casts to the return type happen at the end
803
    of the function, outside any block.) */
804
    RETURN value::'''+type_+''';
805
EXCEPTION
806
    WHEN data_exception THEN
807
        -- Save error in errors table.
808 2751 aaronmk
        -- Insert the value and error for *each* source column.
809
'''+mk_track_data_error(db, errors_table, srcs,
810
    *map(sql_gen.CustomCode, ['value', 'SQLSTATE', 'SQLERRM']))+''';
811 2704 aaronmk
812
        RAISE WARNING '%', SQLERRM;
813
        RETURN NULL;
814
END;
815
$$;
816
'''
817 2718 aaronmk
818
        # Create function
819
        try:
820
            run_query(db, query, recover=True, cacheable=True,
821
                log_ignore_excs=(DuplicateFunctionException,))
822
            break # successful
823
        except DuplicateFunctionException:
824 2770 aaronmk
            function.name = next_version(function.name)
825
            # try again with next version of name
826 2704 aaronmk
827
    return sql_gen.FunctionCall(function, col)
828
829 2414 aaronmk
##### Database structure queries
830
831 2426 aaronmk
def table_row_count(db, table, recover=None):
832 2786 aaronmk
    return value(run_query(db, mk_select(db, table, [sql_gen.row_count],
833 2443 aaronmk
        order_by=None, start=0), recover=recover, log_level=3))
834 2426 aaronmk
835 2414 aaronmk
def table_cols(db, table, recover=None):
836
    return list(col_names(select(db, table, limit=0, order_by=None,
837 2443 aaronmk
        recover=recover, log_level=4)))
838 2414 aaronmk
839 2291 aaronmk
def pkey(db, table, recover=None):
840 832 aaronmk
    '''Assumed to be first column in table'''
841 2339 aaronmk
    return table_cols(db, table, recover)[0]
842 832 aaronmk
843 2559 aaronmk
not_null_col = 'not_null_col'
844 2340 aaronmk
845
def table_not_null_col(db, table, recover=None):
846
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
847
    if not_null_col in table_cols(db, table, recover): return not_null_col
848
    else: return pkey(db, table, recover)
849
850 853 aaronmk
def index_cols(db, table, index):
851
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
852
    automatically created. When you don't know whether something is a UNIQUE
853
    constraint or a UNIQUE index, use this function.'''
854 1909 aaronmk
    module = util.root_module(db.db)
855
    if module == 'psycopg2':
856
        return list(values(run_query(db, '''\
857 853 aaronmk
SELECT attname
858 866 aaronmk
FROM
859
(
860
        SELECT attnum, attname
861
        FROM pg_index
862
        JOIN pg_class index ON index.oid = indexrelid
863
        JOIN pg_class table_ ON table_.oid = indrelid
864
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
865
        WHERE
866 2782 aaronmk
            table_.relname = '''+db.esc_value(table)+'''
867
            AND index.relname = '''+db.esc_value(index)+'''
868 866 aaronmk
    UNION
869
        SELECT attnum, attname
870
        FROM
871
        (
872
            SELECT
873
                indrelid
874
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
875
                    AS indkey
876
            FROM pg_index
877
            JOIN pg_class index ON index.oid = indexrelid
878
            JOIN pg_class table_ ON table_.oid = indrelid
879
            WHERE
880 2782 aaronmk
                table_.relname = '''+db.esc_value(table)+'''
881
                AND index.relname = '''+db.esc_value(index)+'''
882 866 aaronmk
        ) s
883
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
884
) s
885 853 aaronmk
ORDER BY attnum
886 2782 aaronmk
'''
887
            , cacheable=True, log_level=4)))
888 1909 aaronmk
    else: raise NotImplementedError("Can't list index columns for "+module+
889
        ' database')
890 853 aaronmk
891 464 aaronmk
def constraint_cols(db, table, constraint):
892 1849 aaronmk
    module = util.root_module(db.db)
893 464 aaronmk
    if module == 'psycopg2':
894
        return list(values(run_query(db, '''\
895
SELECT attname
896
FROM pg_constraint
897
JOIN pg_class ON pg_class.oid = conrelid
898
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
899
WHERE
900 2783 aaronmk
    relname = '''+db.esc_value(table)+'''
901
    AND conname = '''+db.esc_value(constraint)+'''
902 464 aaronmk
ORDER BY attnum
903 2783 aaronmk
'''
904
            )))
905 464 aaronmk
    else: raise NotImplementedError("Can't list constraint columns for "+module+
906
        ' database')
907
908 2096 aaronmk
row_num_col = '_row_num'
909
910 2688 aaronmk
def add_index(db, exprs, table=None, unique=False):
911
    '''Adds an index on column(s) or expression(s) if it doesn't already exist.
912 2538 aaronmk
    Currently, only function calls are supported as expressions.
913
    '''
914 2688 aaronmk
    if not lists.is_seq(exprs): exprs = [exprs]
915 2538 aaronmk
916 2688 aaronmk
    # Parse exprs
917
    old_exprs = exprs[:]
918
    exprs = []
919
    cols = []
920
    for i, expr in enumerate(old_exprs):
921
        expr = copy.deepcopy(expr) # don't modify input!
922
        expr = sql_gen.as_Col(expr)
923
924
        # Extract col
925
        if isinstance(expr, sql_gen.FunctionCall):
926
            col = expr.args[0]
927
            expr = sql_gen.Expr(expr)
928
        else: col = expr
929
930
        # Extract table
931
        if table == None:
932
            assert sql_gen.is_table_col(col)
933
            table = col.table
934
935
        col.table = None
936
937
        exprs.append(expr)
938
        cols.append(col)
939 2408 aaronmk
940 2688 aaronmk
    table = sql_gen.as_Table(table)
941
    index = sql_gen.Table(str(sql_gen.Col(','.join(map(str, cols)), table)))
942
943
    str_ = 'CREATE'
944
    if unique: str_ += ' UNIQUE'
945
    str_ += ' INDEX '+index.to_str(db)+' ON '+table.to_str(db)+' ('+(
946
        ', '.join((v.to_str(db) for v in exprs)))+')'
947
948
    try: run_query(db, str_, recover=True, cacheable=True, log_level=3)
949 2408 aaronmk
    except DuplicateTableException: pass # index already existed
950
951 2686 aaronmk
def add_pkey(db, table, cols=None, recover=None):
952
    '''Adds a primary key.
953
    @param cols [sql_gen.Col,...] The columns in the primary key.
954
        Defaults to the first column in the table.
955 2406 aaronmk
    @pre The table must not already have a primary key.
956
    '''
957
    table = sql_gen.as_Table(table)
958 2686 aaronmk
    if cols == None: cols = [pkey(db, table, recover)]
959
    col_strs = [sql_gen.to_name_only_col(v).to_str(db) for v in cols]
960 2406 aaronmk
961 2781 aaronmk
    run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD PRIMARY KEY ('
962
        +(', '.join(col_strs))+')', recover=True, cacheable=True, log_level=3,
963
        log_ignore_excs=(DuplicateTableException,))
964 2406 aaronmk
965 2772 aaronmk
already_indexed = object() # tells add_indexes() the pkey has already been added
966
967
def add_indexes(db, table, has_pkey=True):
968
    '''Adds an index on all columns in a table.
969
    @param has_pkey bool|already_indexed Whether a pkey instead of a regular
970
        index should be added on the first column.
971
        * If already_indexed, the pkey is assumed to have already been added
972
    '''
973
    cols = table_cols(db, table)
974
    if has_pkey:
975
        if has_pkey is not already_indexed: add_pkey(db, table)
976
        cols = cols[1:]
977
    for col in cols: add_index(db, col, table)
978
979 2086 aaronmk
def add_row_num(db, table):
980 2117 aaronmk
    '''Adds a row number column to a table. Its name is in row_num_col. It will
981
    be the primary key.'''
982 2320 aaronmk
    table = sql_gen.as_Table(table).to_str(db)
983 2096 aaronmk
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
984 2443 aaronmk
        +' serial NOT NULL PRIMARY KEY', log_level=3)
985 2086 aaronmk
986 2760 aaronmk
def create_table(db, table, cols, has_pkey=True, col_indexes=True):
987 2675 aaronmk
    '''Creates a table.
988 2681 aaronmk
    @param cols [sql_gen.TypedCol,...] The column names and types
989
    @param has_pkey If set, the first column becomes the primary key.
990 2760 aaronmk
    @param col_indexes bool|[ref]
991
        * If True, indexes will be added on all non-pkey columns.
992
        * If a list reference, [0] will be set to a function to do this.
993
          This can be used to delay index creation until the table is populated.
994 2675 aaronmk
    '''
995
    table = sql_gen.as_Table(table)
996
997 2681 aaronmk
    if has_pkey:
998
        cols[0] = pkey = copy.copy(cols[0]) # don't modify input!
999
        pkey.type += ' NOT NULL PRIMARY KEY'
1000
1001 2675 aaronmk
    str_ = 'CREATE TABLE '+table.to_str(db)+' (\n'
1002 2681 aaronmk
    str_ += '\n, '.join(v.to_str(db) for v in cols)
1003
    str_ += '\n);\n'
1004 2675 aaronmk
    run_query(db, str_, cacheable=True, log_level=2)
1005 2760 aaronmk
1006
    # Add indexes
1007 2773 aaronmk
    if has_pkey: has_pkey = already_indexed
1008
    def add_indexes_(): add_indexes(db, table, has_pkey)
1009
    if isinstance(col_indexes, list): col_indexes[0] = add_indexes_ # defer
1010
    elif col_indexes: add_indexes_() # add now
1011 2675 aaronmk
1012 2684 aaronmk
def vacuum(db, table):
1013
    table = sql_gen.as_Table(table)
1014
    db.with_autocommit(lambda: run_query(db, 'VACUUM ANALYZE '+table.to_str(db),
1015
        log_level=3))
1016
1017 2732 aaronmk
def truncate(db, table, schema='public'):
1018 2777 aaronmk
    table = sql_gen.as_Table(table, schema)
1019 2733 aaronmk
    return run_query(db, 'TRUNCATE '+table.to_str(db)+' CASCADE')
1020 2732 aaronmk
1021 2729 aaronmk
def tables(db, schema_like='public', table_like='%', exact=False):
1022
    if exact: compare = '='
1023
    else: compare = 'LIKE'
1024
1025 1849 aaronmk
    module = util.root_module(db.db)
1026 832 aaronmk
    if module == 'psycopg2':
1027 2779 aaronmk
        conds = [('schemaname', sql_gen.CompareCond(schema_like, compare)),
1028
            ('tablename', sql_gen.CompareCond(table_like, compare))]
1029
        return values(select(db, 'pg_tables', ['tablename'], conds,
1030
            order_by='tablename', log_level=4))
1031 1968 aaronmk
    elif module == 'MySQLdb':
1032 2779 aaronmk
        return values(run_query(db, 'SHOW TABLES LIKE '+db.esc_value(table_like)
1033
            , cacheable=True, log_level=4))
1034 832 aaronmk
    else: raise NotImplementedError("Can't list tables for "+module+' database')
1035 830 aaronmk
1036 2726 aaronmk
def table_exists(db, table):
1037
    table = sql_gen.as_Table(table)
1038 2730 aaronmk
    return list(tables(db, table.schema, table.name, exact=True)) != []
1039 2726 aaronmk
1040
def errors_table(db, table, if_exists=True):
1041
    '''
1042
    @param if_exists If set, returns None if the errors table doesn't exist
1043
    @return None|sql_gen.Table
1044
    '''
1045
    table = sql_gen.as_Table(table)
1046
    if table.srcs != (): table = table.srcs[0]
1047
1048
    errors_table = sql_gen.suffixed_table(table, '.errors')
1049
    if if_exists and not table_exists(db, errors_table): return None
1050
    return errors_table
1051
1052 833 aaronmk
##### Database management
1053
1054 1968 aaronmk
def empty_db(db, schema='public', **kw_args):
1055
    '''For kw_args, see tables()'''
1056
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
1057 833 aaronmk
1058 832 aaronmk
##### Heuristic queries
1059
1060 2104 aaronmk
def put(db, table, row, pkey_=None, row_ct_ref=None):
1061 1554 aaronmk
    '''Recovers from errors.
1062 2077 aaronmk
    Only works under PostgreSQL (uses INSERT RETURNING).
1063
    '''
1064 2642 aaronmk
    row = sql_gen.ColDict(db, table, row)
1065 2104 aaronmk
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
1066
1067 471 aaronmk
    try:
1068 2149 aaronmk
        cur = insert(db, table, row, pkey_, recover=True)
1069 1554 aaronmk
        if row_ct_ref != None and cur.rowcount >= 0:
1070
            row_ct_ref[0] += cur.rowcount
1071
        return value(cur)
1072 471 aaronmk
    except DuplicateKeyException, e:
1073 2653 aaronmk
        row = sql_gen.ColDict(db, table,
1074
            util.dict_subset_right_join(row, e.cols))
1075
        return value(select(db, table, [pkey_], row, recover=True))
1076 471 aaronmk
1077 473 aaronmk
def get(db, table, row, pkey, row_ct_ref=None, create=False):
1078 830 aaronmk
    '''Recovers from errors'''
1079 2209 aaronmk
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
1080 14 aaronmk
    except StopIteration:
1081 40 aaronmk
        if not create: raise
1082 471 aaronmk
        return put(db, table, row, pkey, row_ct_ref) # insert new row
1083 2078 aaronmk
1084 2593 aaronmk
def is_func_result(col):
1085
    return col.table.name.find('(') >= 0 and col.name == 'result'
1086
1087 2592 aaronmk
def into_table_name(out_table, in_tables0, mapping, is_func):
1088 2615 aaronmk
    def in_col_str(in_col):
1089
        in_col = sql_gen.remove_col_rename(in_col)
1090
        if isinstance(in_col, sql_gen.Col):
1091
            table = in_col.table
1092
            if table == in_tables0:
1093
                in_col = sql_gen.to_name_only_col(in_col)
1094
            elif is_func_result(in_col): in_col = table # omit col name
1095
        return str(in_col)
1096
1097 2580 aaronmk
    str_ = str(out_table)
1098
    if is_func:
1099 2615 aaronmk
        str_ += '('
1100 2580 aaronmk
1101 2615 aaronmk
        try: value_in_col = mapping['value']
1102
        except KeyError:
1103 2654 aaronmk
            str_ += ', '.join((str(k)+'='+in_col_str(v)
1104 2615 aaronmk
                for k, v in mapping.iteritems()))
1105
        else: str_ += in_col_str(value_in_col)
1106
1107
        str_ += ')'
1108 2812 aaronmk
    else:
1109
        out_col = 'rank'
1110
        try: in_col = mapping[out_col]
1111
        except KeyError: str_ += '_pkeys'
1112
        else: # has a rank column, so hierarchical
1113
            str_ += '['+str(out_col)+'='+in_col_str(in_col)+']'
1114 2580 aaronmk
    return str_
1115
1116 2508 aaronmk
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
1117 2805 aaronmk
    default=None, is_func=False, on_error=exc.raise_):
1118 2078 aaronmk
    '''Recovers from errors.
1119
    Only works under PostgreSQL (uses INSERT RETURNING).
1120 2131 aaronmk
    @param in_tables The main input table to select from, followed by a list of
1121
        tables to join with it using the main input table's pkey
1122 2312 aaronmk
    @param mapping dict(out_table_col=in_table_col, ...)
1123 2612 aaronmk
        * out_table_col: str (*not* sql_gen.Col)
1124
        * in_table_col: sql_gen.Col|literal-value
1125 2489 aaronmk
    @param into The table to contain the output and input pkeys.
1126 2574 aaronmk
        Defaults to `out_table.name+'_pkeys'`.
1127 2509 aaronmk
    @param default The *output* column to use as the pkey for missing rows.
1128
        If this output column does not exist in the mapping, uses None.
1129 2552 aaronmk
    @param is_func Whether out_table is the name of a SQL function, not a table
1130 2312 aaronmk
    @return sql_gen.Col Where the output pkeys are made available
1131 2078 aaronmk
    '''
1132 2329 aaronmk
    out_table = sql_gen.as_Table(out_table)
1133 2312 aaronmk
1134 2450 aaronmk
    def log_debug(msg): db.log_debug(msg, level=1.5)
1135 2505 aaronmk
    def col_ustr(str_):
1136 2567 aaronmk
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
1137 2450 aaronmk
1138 2768 aaronmk
    out_pkey = pkey(db, out_table, recover=True)
1139
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
1140
1141
    if mapping == {}: # need at least one column for INSERT SELECT
1142
        mapping = {out_pkey: None} # ColDict will replace with default value
1143
1144 2486 aaronmk
    log_debug('********** New iteration **********')
1145 2505 aaronmk
    log_debug('Inserting these input columns into '+strings.as_tt(
1146
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
1147 2463 aaronmk
1148 2382 aaronmk
    # Create input joins from list of input tables
1149
    in_tables_ = in_tables[:] # don't modify input!
1150
    in_tables0 = in_tables_.pop(0) # first table is separate
1151 2735 aaronmk
    errors_table_ = errors_table(db, in_tables0)
1152 2279 aaronmk
    in_pkey = pkey(db, in_tables0, recover=True)
1153 2285 aaronmk
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
1154 2460 aaronmk
    input_joins = [in_tables0]+[sql_gen.Join(v,
1155
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
1156 2131 aaronmk
1157 2592 aaronmk
    if into == None:
1158
        into = into_table_name(out_table, in_tables0, mapping, is_func)
1159
    into = sql_gen.as_Table(into)
1160
1161 2702 aaronmk
    # Set column sources
1162
    in_cols = filter(sql_gen.is_table_col, mapping.values())
1163
    for col in in_cols:
1164
        if col.table == in_tables0: col.set_srcs(sql_gen.src_self)
1165
1166 2486 aaronmk
    log_debug('Joining together input tables into temp table')
1167 2395 aaronmk
    # Place in new table for speed and so don't modify input if values edited
1168 2584 aaronmk
    in_table = sql_gen.Table('in')
1169 2702 aaronmk
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins, in_cols,
1170
        preserve=[in_pkey_col], start=0))
1171 2395 aaronmk
    input_joins = [in_table]
1172 2486 aaronmk
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
1173 2395 aaronmk
1174 2656 aaronmk
    mapping = sql_gen.ColDict(db, out_table, mapping)
1175
        # after applying dicts.join() because that returns a plain dict
1176
1177 2509 aaronmk
    # Resolve default value column
1178
    try: default = mapping[default]
1179
    except KeyError:
1180
        if default != None:
1181
            db.log_debug('Default value column '
1182
                +strings.as_tt(strings.repr_no_u(default))
1183 2511 aaronmk
                +' does not exist in mapping, falling back to None', level=2.1)
1184 2509 aaronmk
            default = None
1185
1186 2387 aaronmk
    pkeys_names = [in_pkey, out_pkey]
1187 2236 aaronmk
    pkeys_cols = [in_pkey_col, out_pkey_col]
1188
1189 2201 aaronmk
    pkeys_table_exists_ref = [False]
1190 2420 aaronmk
    def insert_into_pkeys(joins, cols):
1191 2786 aaronmk
        query = mk_select(db, joins, cols, order_by=None, start=0)
1192 2201 aaronmk
        if pkeys_table_exists_ref[0]:
1193 2786 aaronmk
            insert_select(db, into, pkeys_names, query)
1194 2201 aaronmk
        else:
1195 2786 aaronmk
            run_query_into(db, query, into=into)
1196 2201 aaronmk
            pkeys_table_exists_ref[0] = True
1197
1198 2429 aaronmk
    limit_ref = [None]
1199 2380 aaronmk
    conds = set()
1200 2811 aaronmk
    distinct_on = sql_gen.ColDict(db, out_table)
1201 2325 aaronmk
    def mk_main_select(joins, cols):
1202 2811 aaronmk
        distinct_on_cols = [c.to_Col() for c in distinct_on.values()]
1203
        return mk_select(db, joins, cols, conds, distinct_on_cols,
1204 2429 aaronmk
            limit=limit_ref[0], start=0)
1205 2132 aaronmk
1206 2519 aaronmk
    exc_strs = set()
1207 2309 aaronmk
    def log_exc(e):
1208 2519 aaronmk
        e_str = exc.str_(e, first_line_only=True)
1209
        log_debug('Caught exception: '+e_str)
1210
        assert e_str not in exc_strs # avoid infinite loops
1211
        exc_strs.add(e_str)
1212 2735 aaronmk
1213 2451 aaronmk
    def remove_all_rows():
1214 2450 aaronmk
        log_debug('Returning NULL for all rows')
1215 2429 aaronmk
        limit_ref[0] = 0 # just create an empty pkeys table
1216 2735 aaronmk
1217 2758 aaronmk
    def ignore(in_col, value, e):
1218
        track_data_error(db, errors_table_, in_col.srcs, value, e.cause.pgcode,
1219
            e.cause.pgerror)
1220
1221 2545 aaronmk
        in_col_str = strings.as_tt(repr(in_col))
1222 2544 aaronmk
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
1223
            level=2.5)
1224 2537 aaronmk
        add_index(db, in_col)
1225 2735 aaronmk
1226 2545 aaronmk
        log_debug('Ignoring rows with '+in_col_str+' = '
1227
            +strings.as_tt(repr(value)))
1228 2758 aaronmk
    def remove_rows(in_col, value, e):
1229
        ignore(in_col, value, e)
1230 2378 aaronmk
        cond = (in_col, sql_gen.CompareCond(value, '!='))
1231
        assert cond not in conds # avoid infinite loops
1232 2380 aaronmk
        conds.add(cond)
1233 2758 aaronmk
    def invalid2null(in_col, value, e):
1234
        ignore(in_col, value, e)
1235 2403 aaronmk
        update(db, in_table, [(in_col, None)],
1236
            sql_gen.ColValueCond(in_col, value))
1237 2245 aaronmk
1238 2589 aaronmk
    def insert_pkeys_table(which):
1239
        return sql_gen.Table(sql_gen.add_suffix(in_table.name,
1240
            '_insert_'+which+'_pkeys'))
1241
    insert_out_pkeys = insert_pkeys_table('out')
1242
    insert_in_pkeys = insert_pkeys_table('in')
1243
1244 2206 aaronmk
    # Do inserts and selects
1245 2642 aaronmk
    join_cols = sql_gen.ColDict(db, out_table)
1246 2206 aaronmk
    while True:
1247 2521 aaronmk
        if limit_ref[0] == 0: # special case
1248
            log_debug('Creating an empty pkeys table')
1249 2786 aaronmk
            cur = run_query_into(db, mk_select(db, out_table, [out_pkey],
1250 2521 aaronmk
                limit=limit_ref[0]), into=insert_out_pkeys)
1251
            break # don't do main case
1252
1253 2303 aaronmk
        has_joins = join_cols != {}
1254
1255 2305 aaronmk
        # Prepare to insert new rows
1256 2325 aaronmk
        insert_joins = input_joins[:] # don't modify original!
1257 2403 aaronmk
        insert_args = dict(recover=True, cacheable=False)
1258 2303 aaronmk
        if has_joins:
1259 2325 aaronmk
            insert_joins.append(sql_gen.Join(out_table, join_cols,
1260
                sql_gen.filter_out))
1261
        else:
1262 2404 aaronmk
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1263 2786 aaronmk
        main_select = mk_main_select(insert_joins, mapping.values())
1264 2303 aaronmk
1265 2486 aaronmk
        log_debug('Trying to insert new rows')
1266 2206 aaronmk
        try:
1267 2518 aaronmk
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1268
                **insert_args)
1269 2357 aaronmk
            break # insert successful
1270 2206 aaronmk
        except DuplicateKeyException, e:
1271 2309 aaronmk
            log_exc(e)
1272
1273 2258 aaronmk
            old_join_cols = join_cols.copy()
1274 2811 aaronmk
            distinct_on.update(util.dict_subset(mapping, e.cols))
1275 2565 aaronmk
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1276 2486 aaronmk
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1277 2505 aaronmk
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1278 2258 aaronmk
            assert join_cols != old_join_cols # avoid infinite loops
1279 2230 aaronmk
        except NullValueException, e:
1280 2309 aaronmk
            log_exc(e)
1281
1282 2230 aaronmk
            out_col, = e.cols
1283
            try: in_col = mapping[out_col]
1284 2356 aaronmk
            except KeyError:
1285 2486 aaronmk
                log_debug('Missing mapping for NOT NULL column '+out_col)
1286 2451 aaronmk
                remove_all_rows()
1287 2758 aaronmk
            else: remove_rows(in_col, None, e)
1288 2542 aaronmk
        except FunctionValueException, e:
1289
            log_exc(e)
1290
1291
            func_name = e.name
1292
            value = e.value
1293
            for out_col, in_col in mapping.iteritems():
1294 2758 aaronmk
                in_col = sql_gen.unwrap_func_call(in_col, func_name)
1295
                invalid2null(in_col, value, e)
1296 2525 aaronmk
        except MissingCastException, e:
1297
            log_exc(e)
1298
1299
            out_col = e.col
1300 2706 aaronmk
            type_ = e.type
1301
1302 2724 aaronmk
            log_debug('Casting '+strings.as_tt(out_col)+' input to '
1303
                +strings.as_tt(type_))
1304 2735 aaronmk
            def wrap_func(col): return cast(db, type_, col, errors_table_)
1305 2705 aaronmk
            mapping[out_col] = sql_gen.wrap(wrap_func, mapping[out_col])
1306 2429 aaronmk
        except DatabaseErrors, e:
1307
            log_exc(e)
1308
1309 2808 aaronmk
            log_debug('No handler for exception')
1310
            on_error(e)
1311 2451 aaronmk
            remove_all_rows()
1312 2358 aaronmk
        # after exception handled, rerun loop with additional constraints
1313 2132 aaronmk
1314 2357 aaronmk
    if row_ct_ref != None and cur.rowcount >= 0:
1315
        row_ct_ref[0] += cur.rowcount
1316
1317
    if has_joins:
1318
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1319 2486 aaronmk
        log_debug('Getting output table pkeys of existing/inserted rows')
1320 2420 aaronmk
        insert_into_pkeys(select_joins, pkeys_cols)
1321 2357 aaronmk
    else:
1322 2404 aaronmk
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1323 2357 aaronmk
1324 2486 aaronmk
        log_debug('Getting input table pkeys of inserted rows')
1325 2786 aaronmk
        run_query_into(db, mk_main_select(input_joins, [in_pkey]),
1326 2404 aaronmk
            into=insert_in_pkeys)
1327
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1328 2357 aaronmk
1329 2428 aaronmk
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1330
            insert_in_pkeys)
1331
1332 2486 aaronmk
        log_debug('Combining output and input pkeys in inserted order')
1333 2404 aaronmk
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1334 2357 aaronmk
            {row_num_col: sql_gen.join_same_not_null})]
1335 2420 aaronmk
        insert_into_pkeys(pkey_joins, pkeys_names)
1336 2357 aaronmk
1337 2486 aaronmk
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1338 2594 aaronmk
    add_pkey(db, into)
1339 2407 aaronmk
1340 2508 aaronmk
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1341 2489 aaronmk
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1342 2357 aaronmk
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1343
        # must use join_same_not_null or query will take forever
1344 2420 aaronmk
    insert_into_pkeys(missing_rows_joins,
1345 2508 aaronmk
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1346 2357 aaronmk
1347 2489 aaronmk
    assert table_row_count(db, into) == table_row_count(db, in_table)
1348 2428 aaronmk
1349 2702 aaronmk
    srcs = []
1350
    if is_func: srcs = sql_gen.cols_srcs(in_cols)
1351
    return sql_gen.Col(out_pkey, into, srcs)
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1353
##### Data cleanup
1354
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def cleanup_table(db, table, cols):
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    table = sql_gen.as_Table(table)
1357
    cols = map(sql_gen.as_Col, cols)
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    expr = ('nullif(nullif(trim(both from %s), '+db.esc_value('')+'), '
1360
        +db.esc_value(r'\N')+')')
1361
    changes = [(v, sql_gen.CustomCode(expr % v.to_str(db)))
1362
        for v in cols]
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    update(db, table, changes)