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# Database import/export
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import copy
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import csv
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import operator
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import warnings
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import sys
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import csvs
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import exc
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import dicts
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import sql
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import sql_gen
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import streams
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import strings
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import util
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##### Exceptions
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# Can't use built-in SyntaxError because it stringifies to only the first line
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class SyntaxError(Exception): pass
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##### Data cleanup
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def table_nulls_mapped__set(db, table):
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    assert isinstance(table, sql_gen.Table)
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    sql.run_query(db, 'SELECT util.table_nulls_mapped__set('
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        +sql_gen.table2regclass_text(db, table)+')')
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def table_nulls_mapped__get(db, table):
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    assert isinstance(table, sql_gen.Table)
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    return sql.value(sql.run_query(db, 'SELECT util.table_nulls_mapped__get('
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        +sql_gen.table2regclass_text(db, table)+')'))
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null_strs = ['', '-', r'\N', 'NULL', 'N/A', 'NA', 'UNKNOWN', 'nulo']
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    # NA: this will remove a common abbr for North America, but we don't use the
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    # continent, so this is OK
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def cleanup_table(db, table):
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    '''idempotent'''
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    table = sql_gen.as_Table(table)
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    assert sql.table_exists(db, table)
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    if table_nulls_mapped__get(db, table): return # already cleaned up
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    cols = filter(lambda c: sql_gen.is_text_col(db, c),
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        sql.table_cols(db, table))
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    try: pkey_col = sql.table_pkey_col(db, table)
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    except sql.DoesNotExistException: pass
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    else:
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        try: cols.remove(pkey_col)
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        except ValueError: pass
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    if not cols: return
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    db.log_debug('Cleaning up table', level=1.5)
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    expr = 'trim(both from %s)'
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    for null in null_strs: expr = 'nullif('+expr+', '+db.esc_value(null)+')'
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    changes = [(v, sql_gen.CustomCode(expr % v.to_str(db))) for v in cols]
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    while True:
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        try:
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            sql.update(db, table, changes, in_place=True, recover=True)
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            break # successful
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        except sql.NullValueException, e:
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            db.log_debug('Caught exception: '+exc.str_(e))
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            col, = e.cols
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            sql.drop_not_null(db, col)
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    db.log_debug('Vacuuming and reanalyzing table', level=1.5)
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    sql.vacuum(db, table)
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    table_nulls_mapped__set(db, table)
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##### Error tracking
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def track_data_error(db, errors_table, cols, value, error_code, error):
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    '''
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    @param errors_table If None, does nothing.
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    '''
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    if errors_table == None: return
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    col_names = [c.name for c in cols]
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    if not col_names: col_names = [None] # need at least one entry
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    for col_name in col_names:
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        try:
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            sql.insert(db, errors_table, dict(column=col_name, value=value,
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                error_code=error_code, error=error), recover=True,
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                cacheable=True, log_level=4)
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        except sql.DuplicateKeyException: pass
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class ExcToErrorsTable(sql_gen.ExcToWarning):
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    '''Handles an exception by saving it or converting it to a warning.'''
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    def __init__(self, return_, srcs, errors_table, value=None):
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        '''
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        @param return_ See sql_gen.ExcToWarning
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        @param srcs The column names for the errors table
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        @param errors_table None|sql_gen.Table
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        @param value The value (or an expression for it) that caused the error
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        @pre The invalid value must be in a local variable "value" of type text.
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        '''
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        sql_gen.ExcToWarning.__init__(self, return_)
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        value = sql_gen.as_Code(value)
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        self.srcs = srcs
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        self.errors_table = errors_table
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        self.value = value
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    def to_str(self, db):
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        if not self.srcs or self.errors_table == None:
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            return sql_gen.ExcToWarning.to_str(self, db)
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        errors_table_cols = map(sql_gen.Col,
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            ['column', 'value', 'error_code', 'error'])
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        col_names_query = sql.mk_select(db, sql_gen.NamedValues('c', None,
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            [[c.name] for c in self.srcs]), order_by=None)
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        insert_query = sql.mk_insert_select(db, self.errors_table,
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            errors_table_cols,
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            sql_gen.Values(errors_table_cols).to_str(db))+';\n'
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        return '''\
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-- Save error in errors table.
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DECLARE
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    error_code text := SQLSTATE;
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    error text := SQLERRM;
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    value text := '''+self.value.to_str(db)+''';
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    "column" text;
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BEGIN
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    -- Insert the value and error for *each* source column.
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'''+strings.indent(sql_gen.RowExcIgnore(None, col_names_query, insert_query,
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    row_var=errors_table_cols[0]).to_str(db))+'''
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END;
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'''+self.return_.to_str(db)
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def data_exception_handler(*args, **kw_args):
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    '''Handles a data_exception by saving it or converting it to a warning.
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    For params, see ExcToErrorsTable().
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    '''
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    return sql_gen.data_exception_handler(ExcToErrorsTable(*args, **kw_args))
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def cast(db, type_, col, errors_table=None):
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    '''Casts an (unrenamed) column or value.
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    If errors_table set and col has srcs, saves errors in errors_table (using
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    col's srcs attr as source columns). Otherwise, converts errors to warnings.
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    @param col str|sql_gen.Col|sql_gen.Literal
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    @param errors_table None|sql_gen.Table|str
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    '''
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    col = sql_gen.as_Col(col)
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    # Don't convert exceptions to warnings for user-supplied constants
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    if isinstance(col, sql_gen.Literal): return sql_gen.Cast(type_, col)
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    assert not isinstance(col, sql_gen.NamedCol)
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    function_name = strings.first_word(type_)
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    srcs = col.srcs
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    save_errors = errors_table != None and srcs
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    if save_errors: # function will be unique for the given srcs
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        function_name = strings.ustr(sql_gen.FunctionCall(function_name,
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            *map(sql_gen.to_name_only_col, srcs)))
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    function = db.TempFunction(function_name)
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    # Create function definition
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    modifiers = 'STRICT'
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    if not save_errors: modifiers = 'IMMUTABLE '+modifiers
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    value_param = sql_gen.FunctionParam('value', 'anyelement')
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    handler = data_exception_handler('RETURN NULL;\n', srcs, errors_table,
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        value_param.name)
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    body = sql_gen.CustomCode(handler.to_str(db, '''\
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/* The explicit cast to the return type is needed to make the cast happen
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inside the try block. (Implicit casts to the return type happen at the end
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of the function, outside any block.) */
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RETURN '''+sql_gen.Cast(type_, sql_gen.CustomCode('value')).to_str(db)+''';
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'''))
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    body.lang='plpgsql'
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    sql.define_func(db, sql_gen.FunctionDef(function, type_, body,
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        [value_param], modifiers))
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    return sql_gen.FunctionCall(function, col)
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def func_wrapper_exception_handler(db, return_, args, errors_table):
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    '''Handles a function call's data_exceptions.
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    Supports PL/Python functions.
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    @param return_ See data_exception_handler()
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    @param args [arg...] Function call's args
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    @param errors_table See data_exception_handler()
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    '''
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    args = filter(sql_gen.has_srcs, args)
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    srcs = sql_gen.cross_join_srcs(args)
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    value = sql_gen.merge_not_null(db, ',', args)
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    return sql_gen.NestedExcHandler(
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        data_exception_handler(return_, srcs, errors_table, value)
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        , sql_gen.plpythonu_error_handler
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        )
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def cast_temp_col(db, type_, col, errors_table=None):
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    '''Like cast(), but creates a new column with the cast values if the input
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    is a column.
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    @return The new column or cast value
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    '''
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    def cast_(col): return cast(db, type_, col, errors_table)
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    try: col = sql_gen.underlying_col(col)
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    except sql_gen.NoUnderlyingTableException: return sql_gen.wrap(cast_, col)
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    table = col.table
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    new_col = sql_gen.suffixed_col(col, '::'+strings.first_word(type_))
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    expr = cast_(col)
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    # Add column
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    new_typed_col = sql_gen.TypedCol(new_col.name, type_)
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    sql.add_col(db, table, new_typed_col, comment=strings.urepr(col)+'::'+type_)
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    new_col.name = new_typed_col.name # propagate any renaming
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    sql.update(db, table, [(new_col, expr)], in_place=True, recover=True)
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    return new_col
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def errors_table(db, table, if_exists=True):
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    '''
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    @param if_exists If set, returns None if the errors table doesn't exist
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    @return None|sql_gen.Table
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    '''
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    table = sql_gen.as_Table(table)
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    if table.srcs != (): table = table.srcs[0]
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    errors_table = sql_gen.suffixed_table(table, '.errors')
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    if if_exists and not sql.table_exists(db, errors_table): return None
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    return errors_table
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def mk_errors_table(db, table):
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    errors_table_ = errors_table(db, table, if_exists=False)
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    if sql.table_exists(db, errors_table_, cacheable=False): return
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    typed_cols = [
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        sql_gen.TypedCol('column', 'text'),
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        sql_gen.TypedCol('value', 'text'),
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        sql_gen.TypedCol('error_code', 'character varying(5)', nullable=False),
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        sql_gen.TypedCol('error', 'text', nullable=False),
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        ]
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    sql.create_table(db, errors_table_, typed_cols, has_pkey=False)
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    index_cols = ['column', sql_gen.CustomCode('md5(value)'), 'error_code',
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        sql_gen.CustomCode('md5(error)')]
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    sql.add_index(db, index_cols, errors_table_, unique=True)
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##### Import
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row_num_col_def = copy.copy(sql.row_num_col_def)
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row_num_col_def.name = 'row_num'
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row_num_col_def.type = 'integer'
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def append_csv(db, table, reader, header):
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    def esc_name_(name): return sql.esc_name(db, name)
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    def log(msg, level=1): db.log_debug(msg, level)
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    # Wrap in standardizing stream
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    cols_ct = len(header)
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    stream = csvs.InputRewriter(csvs.ProgressInputFilter(
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        csvs.ColCtFilter(reader, cols_ct), sys.stderr, n=1000))
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    #streams.copy(stream, sys.stderr) # to troubleshoot copy_expert() errors
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    dialect = stream.dialect # use default dialect
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    # Create COPY FROM statement
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    if header == sql.table_col_names(db, table): cols_str = ''
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    else: cols_str =' ('+(', '.join(map(esc_name_, header)))+')'
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    copy_from = ('COPY '+table.to_str(db)+cols_str+' FROM STDIN DELIMITER '
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        +db.esc_value(dialect.delimiter)+' NULL '+db.esc_value(''))
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    assert not csvs.is_tsv(dialect)
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    copy_from += ' CSV'
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    if dialect.quoting != csv.QUOTE_NONE:
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        quote_str = db.esc_value(dialect.quotechar)
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        copy_from += ' QUOTE '+quote_str
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        if dialect.doublequote: copy_from += ' ESCAPE '+quote_str
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    copy_from += ';\n'
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    log(copy_from, level=2)
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    try: db.db.cursor().copy_expert(copy_from, stream)
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    except Exception, e: sql.parse_exception(db, e, recover=True)
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def import_csv(db, table, reader, header):
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    def log(msg, level=1): db.log_debug(msg, level)
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    # Get format info
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    col_names = map(strings.to_unicode, header)
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    for i, col in enumerate(col_names): # replace empty column names
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        if col == '': col_names[i] = 'column_'+str(i)
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    # Select schema and escape names
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    def esc_name(name): return db.esc_name(name)
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    typed_cols = [sql_gen.TypedCol(v, 'text') for v in col_names]
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    typed_cols.insert(0, row_num_col_def)
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    header.insert(0, row_num_col_def.name)
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    reader = csvs.RowNumFilter(reader)
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    log('Creating table')
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    # Note that this is not rolled back if the import fails. Instead, it is
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    # cached, and will not be re-run if the import is retried.
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    sql.create_table(db, table, typed_cols, has_pkey=False, col_indexes=False)
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    # Free memory used by deleted (rolled back) rows from any failed import.
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    # This MUST be run so that the rows will be stored in inserted order, and
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    # the row_num added after import will match up with the CSV's row order.
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    sql.truncate(db, table)
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    # Load the data
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    def load(): append_csv(db, table, reader, header)
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    sql.with_savepoint(db, load)
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    cleanup_table(db, table)
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def put(db, table, row, pkey_=None, row_ct_ref=None, on_error=exc.reraise):
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    '''Recovers from errors.
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    Only works under PostgreSQL (uses INSERT RETURNING).
318
    '''
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    return put_table(db, table, [], row, row_ct_ref, on_error=on_error)
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def get(db, table, row, pkey, row_ct_ref=None, create=False):
322
    '''Recovers from errors'''
323
    try:
324
        return sql.value(sql.select(db, table, [pkey], row, limit=1,
325
            recover=True))
326
    except StopIteration:
327
        if not create: raise
328
        return put(db, table, row, pkey, row_ct_ref) # insert new row
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330
def is_func_result(col):
331
    return col.table.name.find('(') >= 0 and col.name == 'result'
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def into_table_name(out_table, in_tables0, mapping, is_func):
334
    def in_col_str(in_col):
335
        in_col = sql_gen.remove_col_rename(in_col)
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        if isinstance(in_col, sql_gen.Col):
337
            table = in_col.table
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            if table == in_tables0:
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                in_col = sql_gen.to_name_only_col(in_col)
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            elif is_func_result(in_col): in_col = table # omit col name
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        return strings.ustr(in_col)
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    str_ = strings.ustr(out_table)
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    if is_func:
345
        str_ += '('
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        try: value_in_col = mapping['value']
348
        except KeyError:
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            str_ += ', '.join((strings.ustr(k)+'='+in_col_str(v)
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                for k, v in mapping.iteritems()))
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        else: str_ += in_col_str(value_in_col)
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        str_ += ')'
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    else:
355
        out_col = 'rank'
356
        try: in_col = mapping[out_col]
357
        except KeyError: str_ += '_pkeys'
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        else: # has a rank column, so hierarchical
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            str_ += '['+strings.ustr(out_col)+'='+in_col_str(in_col)+']'
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    return str_
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def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, default=None,
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    col_defaults={}, on_error=exc.reraise):
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    '''Recovers from errors.
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    Only works under PostgreSQL (uses INSERT RETURNING).
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    Warning: This function's normalizing algorithm does not support database
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    triggers that populate fields covered by the unique constraint used to do
369
    the DISTINCT ON. Such fields must be populated by the mappings instead.
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    (Other unique constraints and other non-unique fields are not affected by
371
    this restriction on triggers. Note that the primary key will normally not be
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    the DISTINCT ON constraint, so trigger-populated natural keys are supported
373
    *unless* the input table contains duplicate rows for some generated keys.)
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    Note that much of the complexity of the normalizing algorithm is due to
376
    PostgreSQL (and other DB systems) not having a native command for
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    INSERT ON DUPLICATE SELECT (wiki.vegpath.org/INSERT_ON_DUPLICATE_SELECT).
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    For PostgreSQL 9.1+, this can now be emulated using INSTEAD OF triggers.
379
    For earlier versions, you instead have to use this function.
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    @param in_tables The main input table to select from, followed by a list of
382
        tables to join with it using the main input table's pkey
383
    @param mapping dict(out_table_col=in_table_col, ...)
384
        * out_table_col: str (*not* sql_gen.Col)
385
        * in_table_col: sql_gen.Col|literal-value
386
    @param default The *output* column to use as the pkey for missing rows.
387
        If this output column does not exist in the mapping, uses None.
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        Note that this will be used for *all* missing rows, regardless of which
389
        error caused them not to be inserted.
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    @param col_defaults Default values for required columns.
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    @return sql_gen.Col Where the output pkeys are made available
392
    '''
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    import psycopg2.extensions
394
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    # Special handling for functions with hstore params
396
    if out_table == '_map':
397
        import psycopg2.extras
398
        psycopg2.extras.register_hstore(db.db)
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400
        # Parse args
401
        try: value = mapping.pop('value')
402
        except KeyError: return None # value required
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        mapping = dict([(k, sql_gen.get_value(v))
405
            for k, v in mapping.iteritems()]) # unwrap literal value
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        mapping = dict(map=mapping, value=value) # non-value params -> hstore
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    out_table = sql_gen.as_Table(out_table)
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    def log_debug(msg): db.log_debug(msg, level=1.5)
411
    def col_ustr(str_):
412
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
413
414
    log_debug('********** New iteration **********')
415
    log_debug('Inserting these input columns into '+strings.as_tt(
416
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
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    is_function = sql.function_exists(db, out_table)
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    if is_function: row_ct_ref = None # only track inserted rows
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    # Warn if inserting empty table rows
423
    if not mapping and not is_function: # functions with no args OK
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        warnings.warn(UserWarning('Inserting empty table row(s)'))
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    if is_function: out_pkey = 'result'
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    else: out_pkey = sql.pkey_name(db, out_table, recover=True)
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    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
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    in_tables_ = copy.copy(in_tables) # don't modify input!
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    try: in_tables0 = in_tables_.pop(0) # first table is separate
432
    except IndexError: in_tables0 = None
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    else:
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        in_pkey = sql.pkey_name(db, in_tables0, recover=True)
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        in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
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    # Determine if can use optimization for only literal values
438
    is_literals = not reduce(operator.or_, map(sql_gen.is_table_col,
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        mapping.values()), False)
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    is_literals_or_function = is_literals or is_function
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    if in_tables0 == None: errors_table_ = None
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    else: errors_table_ = errors_table(db, in_tables0)
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    # Create input joins from list of input tables
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    input_joins = [in_tables0]+[sql_gen.Join(v,
447
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
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    orig_mapping = mapping.copy()
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    if mapping == {} and not is_function: # need >= one column for INSERT SELECT
451
        mapping = {out_pkey: None} # ColDict will replace with default value
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    if not is_literals:
454 3628 aaronmk
        into = sql_gen.as_Table(into_table_name(out_table, in_tables0, mapping,
455
            is_function))
456 5553 aaronmk
        # Ensure into's out_pkey is different from in_pkey by prepending "out."
457 4495 aaronmk
        if is_function: into_out_pkey = out_pkey
458 5553 aaronmk
        else: into_out_pkey = 'out.'+out_pkey
459 3431 aaronmk
460
        # Set column sources
461
        in_cols = filter(sql_gen.is_table_col, mapping.values())
462
        for col in in_cols:
463
            if col.table == in_tables0: col.set_srcs(sql_gen.src_self)
464
465
        log_debug('Joining together input tables into temp table')
466
        # Place in new table so don't modify input and for speed
467
        in_table = sql_gen.Table('in')
468
        mapping = dicts.join(mapping, sql.flatten(db, in_table, input_joins,
469
            in_cols, preserve=[in_pkey_col]))
470
        input_joins = [in_table]
471
        db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
472 3077 aaronmk
473 3692 aaronmk
    # Wrap mapping in a sql_gen.ColDict.
474
    # sql_gen.ColDict sanitizes both keys and values passed into it.
475
    # Do after applying dicts.join() because that returns a plain dict.
476 3077 aaronmk
    mapping = sql_gen.ColDict(db, out_table, mapping)
477
478 5239 aaronmk
    # Save all rows since in_table may have rows deleted
479 3431 aaronmk
    if is_literals: pass
480
    elif is_function: full_in_table = in_table
481 3386 aaronmk
    else:
482
        full_in_table = sql_gen.suffixed_table(in_table, '_full')
483 5530 aaronmk
        sql.copy_table(db, in_table, full_in_table)
484 3287 aaronmk
485 3077 aaronmk
    pkeys_table_exists_ref = [False]
486 5444 aaronmk
    def insert_into_pkeys(query, **kw_args):
487 3077 aaronmk
        if pkeys_table_exists_ref[0]:
488 4484 aaronmk
            sql.insert_select(db, into, [in_pkey, into_out_pkey], query,
489
                **kw_args)
490 3077 aaronmk
        else:
491 6800 aaronmk
            kw_args.setdefault('add_pkey_', True)
492 13005 aaronmk
            # don't warn if can't create pkey, because this just indicates that,
493
            # at some point in the import tree, it used a set-returning function
494
            kw_args.setdefault('add_pkey_warn', False)
495 6800 aaronmk
496
            sql.run_query_into(db, query, into=into, **kw_args)
497 3077 aaronmk
            pkeys_table_exists_ref[0] = True
498
499 5523 aaronmk
    def mk_main_select(joins, cols): return sql.mk_select(db, joins, cols)
500 3418 aaronmk
501 3431 aaronmk
    if is_literals: insert_in_table = None
502
    else:
503
        insert_in_table = in_table
504
        insert_in_tables = [insert_in_table]
505 3352 aaronmk
    join_cols = sql_gen.ColDict(db, out_table)
506 10845 aaronmk
    join_custom_cond = None
507 3077 aaronmk
508
    exc_strs = set()
509
    def log_exc(e):
510
        e_str = exc.str_(e, first_line_only=True)
511
        log_debug('Caught exception: '+e_str)
512 3552 aaronmk
        if e_str in exc_strs: # avoid infinite loops
513
            log_debug('Exception already seen, handler broken')
514
            on_error(e)
515
            remove_all_rows()
516 5718 aaronmk
            return False
517 3552 aaronmk
        else: exc_strs.add(e_str)
518 5718 aaronmk
        return True
519 3077 aaronmk
520 5377 aaronmk
    ignore_all_ref = [False]
521 3077 aaronmk
    def remove_all_rows():
522
        log_debug('Ignoring all rows')
523 5377 aaronmk
        ignore_all_ref[0] = True # just return the default value column
524 3077 aaronmk
525 5889 aaronmk
    def handle_unknown_exc(e):
526
        log_debug('No handler for exception')
527
        on_error(e)
528
        remove_all_rows()
529
530 5504 aaronmk
    def ensure_cond(cond, e, passed=False, failed=False):
531 10838 aaronmk
        '''
532
        @param passed at least one row passed the constraint
533
        @param failed at least one row failed the constraint
534
        '''
535 5449 aaronmk
        if is_literals: # we know the constraint was applied exactly once
536
            if passed: pass
537
            elif failed: remove_all_rows()
538
            else: raise NotImplementedError()
539 3704 aaronmk
        else:
540 5888 aaronmk
            if not is_function:
541
                out_table_cols = sql_gen.ColDict(db, out_table)
542
                out_table_cols.update(util.dict_subset_right_join({},
543
                    sql.table_col_names(db, out_table)))
544 3704 aaronmk
545
            in_cols = []
546 7117 aaronmk
            cond = strings.ustr(cond)
547 5818 aaronmk
            orig_cond = cond
548 5367 aaronmk
            cond = sql_gen.map_expr(db, cond, mapping, in_cols)
549 5888 aaronmk
            if not is_function:
550
                cond = sql_gen.map_expr(db, cond, out_table_cols)
551 3704 aaronmk
552 5442 aaronmk
            log_debug('Ignoring rows that do not satisfy '+strings.as_tt(cond))
553 5449 aaronmk
            cur = None
554
            if cond == sql_gen.false_expr:
555
                assert failed
556
                remove_all_rows()
557
            elif cond == sql_gen.true_expr: assert passed
558 5895 aaronmk
            else:
559
                while True:
560
                    not_cond = sql_gen.NotCond(sql_gen.CustomCode(cond))
561
                    try:
562
                        cur = sql.delete(db, insert_in_table, not_cond)
563
                        break
564
                    except sql.DoesNotExistException, e:
565
                        if e.type != 'column': raise
566
567
                        last_cond = cond
568
                        cond = sql_gen.map_expr(db, cond, {e.name: None})
569
                        if cond == last_cond: raise # not fixable
570 5449 aaronmk
571 5827 aaronmk
            # If any rows failed cond
572
            if failed or cur != None and cur.rowcount > 0:
573 5505 aaronmk
                track_data_error(db, errors_table_,
574
                    sql_gen.cross_join_srcs(in_cols), None, e.cause.pgcode,
575 7117 aaronmk
                    strings.ensure_newl(strings.ustr(e.cause.pgerror))
576
                    +'condition: '+orig_cond+'\ntranslated condition: '+cond)
577 3352 aaronmk
578 3294 aaronmk
    not_null_cols = set()
579 3077 aaronmk
    def ignore(in_col, value, e):
580 3630 aaronmk
        if sql_gen.is_table_col(in_col):
581
            in_col = sql_gen.with_table(in_col, insert_in_table)
582
583
            track_data_error(db, errors_table_, in_col.srcs, value,
584
                e.cause.pgcode, e.cause.pgerror)
585
586
            sql.add_index(db, in_col, insert_in_table) # enable fast filtering
587
            if value != None and in_col not in not_null_cols:
588 4492 aaronmk
                log_debug('Replacing invalid value '
589
                    +strings.as_tt(strings.urepr(value))+' with NULL in column '
590
                    +strings.as_tt(in_col.to_str(db)))
591 3630 aaronmk
                sql.update(db, insert_in_table, [(in_col, None)],
592
                    sql_gen.ColValueCond(in_col, value))
593
            else:
594 3637 aaronmk
                log_debug('Ignoring rows with '+strings.as_tt(in_col.to_str(db))
595 4492 aaronmk
                    +' = '+strings.as_tt(strings.urepr(value)))
596 3630 aaronmk
                sql.delete(db, insert_in_table,
597
                    sql_gen.ColValueCond(in_col, value))
598
                if value == None: not_null_cols.add(in_col)
599 3293 aaronmk
        else:
600 3630 aaronmk
            assert isinstance(in_col, sql_gen.NamedCol)
601 3684 aaronmk
            in_value = sql_gen.remove_col_rename(in_col)
602
            assert sql_gen.is_literal(in_value)
603
            if value == in_value.value:
604
                if value != None:
605
                    log_debug('Replacing invalid literal '
606
                        +strings.as_tt(in_col.to_str(db))+' with NULL')
607
                    mapping[in_col.name] = None
608
                else:
609
                    remove_all_rows()
610
            # otherwise, all columns were being ignore()d because the specific
611
            # column couldn't be identified, and this was not the invalid column
612 3077 aaronmk
613 3431 aaronmk
    if not is_literals:
614
        def insert_pkeys_table(which):
615
            return sql_gen.Table(sql_gen.concat(in_table.name,
616
                '_insert_'+which+'_pkeys'))
617
        insert_out_pkeys = insert_pkeys_table('out')
618
        insert_in_pkeys = insert_pkeys_table('in')
619 3077 aaronmk
620 3918 aaronmk
    def mk_func_call():
621 3550 aaronmk
        args = dict(((k.name, v) for k, v in mapping.iteritems()))
622 4484 aaronmk
        return sql_gen.FunctionCall(out_table, **args), args
623 3550 aaronmk
624 12150 aaronmk
    def handle_MissingCastException(e):
625
        if not log_exc(e): return False
626
627
        type_ = e.type
628
        if e.col == None: out_cols = mapping.keys()
629
        else: out_cols = [e.col]
630
631
        for out_col in out_cols:
632
            log_debug('Casting '+strings.as_tt(strings.repr_no_u(out_col))
633
                +' input to '+strings.as_tt(type_))
634
            in_col = mapping[out_col]
635
            while True:
636
                try:
637 14074 aaronmk
                    cast_col = cast_temp_col(db, type_, in_col, errors_table_)
638
                    mapping[out_col] = cast_col
639
                    if out_col in join_cols: join_cols[out_col] = cast_col
640 12150 aaronmk
                    break # cast successful
641
                except sql.InvalidValueException, e:
642
                    if not log_exc(e): return False
643
644
                    ignore(in_col, e.value, e)
645
646
        return True
647
648 5239 aaronmk
    missing_msg = None
649
650 3077 aaronmk
    # Do inserts and selects
651
    while True:
652 3473 aaronmk
        has_joins = join_cols != {}
653
654 5377 aaronmk
        if ignore_all_ref[0]: break # unrecoverable error, so don't do main case
655 3077 aaronmk
656
        # Prepare to insert new rows
657 3918 aaronmk
        if is_function:
658 5726 aaronmk
            if is_literals:
659
                log_debug('Calling function')
660
                func_call, args = mk_func_call()
661 3077 aaronmk
        else:
662 3550 aaronmk
            log_debug('Trying to insert new rows')
663 3291 aaronmk
            insert_args = dict(recover=True, cacheable=False)
664
            if has_joins:
665
                insert_args.update(dict(ignore=True))
666
            else:
667 3431 aaronmk
                insert_args.update(dict(returning=out_pkey))
668
                if not is_literals:
669
                    insert_args.update(dict(into=insert_out_pkeys))
670 3291 aaronmk
            main_select = mk_main_select([insert_in_table], [sql_gen.with_table(
671
                c, insert_in_table) for c in mapping.values()])
672 3077 aaronmk
673 3292 aaronmk
        try:
674
            cur = None
675 3077 aaronmk
            if is_function:
676 3917 aaronmk
                if is_literals:
677
                    cur = sql.select(db, fields=[func_call], recover=True,
678
                        cacheable=True)
679 5444 aaronmk
                else:
680 5726 aaronmk
                    log_debug('Defining wrapper function')
681
682
                    func_call, args = mk_func_call()
683
                    func_call = sql_gen.NamedCol(into_out_pkey, func_call)
684
685
                    # Create empty pkeys table so its row type can be used
686
                    insert_into_pkeys(sql.mk_select(db, input_joins,
687 6801 aaronmk
                        [in_pkey_col, func_call], limit=0), add_pkey_=False,
688
                        recover=True)
689 5726 aaronmk
                    result_type = db.col_info(sql_gen.Col(into_out_pkey,
690
                        into)).type
691
692
                    ## Create error handling wrapper function
693
694
                    wrapper = db.TempFunction(sql_gen.concat(into.name,
695
                        '_wrap'))
696
697
                    select_cols = [in_pkey_col]+args.values()
698
                    row_var = copy.copy(sql_gen.row_var)
699
                    row_var.set_srcs([in_table])
700
                    in_pkey_var = sql_gen.Col(in_pkey, row_var)
701
702
                    args = dict(((k, sql_gen.with_table(v, row_var))
703
                        for k, v in args.iteritems()))
704
                    func_call = sql_gen.FunctionCall(out_table, **args)
705
706
                    def mk_return(result):
707
                        return sql_gen.ReturnQuery(sql.mk_select(db,
708
                            fields=[in_pkey_var, result], explain=False))
709
                    exc_handler = func_wrapper_exception_handler(db,
710
                        mk_return(sql_gen.Cast(result_type, None)),
711
                        args.values(), errors_table_)
712
713
                    sql.define_func(db, sql_gen.FunctionDef(wrapper,
714
                        sql_gen.SetOf(into),
715
                        sql_gen.RowExcIgnore(sql_gen.RowType(in_table),
716
                            sql.mk_select(db, input_joins),
717
                            mk_return(func_call), exc_handler=exc_handler)
718
                        ))
719
                    wrapper_table = sql_gen.FunctionCall(wrapper)
720
721
                    log_debug('Calling function')
722 5444 aaronmk
                    insert_into_pkeys(sql.mk_select(db, wrapper_table,
723 5894 aaronmk
                        order_by=None), recover=True, cacheable=False)
724 8820 aaronmk
                    sql.add_pkey_or_index(db, into)
725 3077 aaronmk
            else:
726 3292 aaronmk
                cur = sql.insert_select(db, out_table, mapping.keys(),
727 3077 aaronmk
                    main_select, **insert_args)
728
            break # insert successful
729
        except sql.MissingCastException, e:
730 12150 aaronmk
            if not handle_MissingCastException(e): break
731 3077 aaronmk
        except sql.DuplicateKeyException, e:
732 5718 aaronmk
            if not log_exc(e): break
733 3077 aaronmk
734 3274 aaronmk
            # Different rows violating different unique constraints not
735
            # supported
736
            assert not join_cols
737
738 10845 aaronmk
            join_custom_cond = e.cond
739 5504 aaronmk
            if e.cond != None: ensure_cond(e.cond, e, passed=True)
740 5450 aaronmk
741 3077 aaronmk
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
742
            log_debug('Ignoring existing rows, comparing on these columns:\n'
743
                +strings.as_inline_table(join_cols, ustr=col_ustr))
744 3102 aaronmk
745 3431 aaronmk
            if is_literals:
746
                return sql.value(sql.select(db, out_table, [out_pkey_col],
747 4025 aaronmk
                    join_cols, order_by=None))
748 3431 aaronmk
749 7180 aaronmk
            # Uniquify and filter input table to avoid (most) duplicate keys
750
            # (Additional duplicates may be added concurrently and will be
751
            # filtered out separately upon insert.)
752 12153 aaronmk
            while True:
753
                try:
754
                    insert_in_table = sql.distinct_table(db, insert_in_table,
755
                        join_cols.values(), [insert_in_table,
756
                        sql_gen.Join(out_table, join_cols, sql_gen.filter_out,
757
                        e.cond)])
758
                    insert_in_tables.append(insert_in_table)
759
                    break # insert successful
760
                except sql.MissingCastException, e1: # don't modify outer e
761
                    if not handle_MissingCastException(e1): break
762 3077 aaronmk
        except sql.NullValueException, e:
763 5718 aaronmk
            if not log_exc(e): break
764 3077 aaronmk
765
            out_col, = e.cols
766
            try: in_col = mapping[out_col]
767 3618 aaronmk
            except KeyError, e:
768
                try: in_col = mapping[out_col] = col_defaults[out_col]
769
                except KeyError:
770 5239 aaronmk
                    missing_msg = 'Missing mapping for NOT NULL column '+out_col
771
                    log_debug(missing_msg)
772 3618 aaronmk
                    remove_all_rows()
773 3294 aaronmk
            else: ignore(in_col, None, e)
774 3352 aaronmk
        except sql.CheckException, e:
775 5718 aaronmk
            if not log_exc(e): break
776 3352 aaronmk
777 5504 aaronmk
            ensure_cond(e.cond, e, failed=True)
778 3413 aaronmk
        except sql.InvalidValueException, e:
779 5718 aaronmk
            if not log_exc(e): break
780 3413 aaronmk
781
            for in_col in mapping.values(): ignore(in_col, e.value, e)
782 3474 aaronmk
        except psycopg2.extensions.TransactionRollbackError, e:
783 5718 aaronmk
            if not log_exc(e): break
784 3474 aaronmk
            # retry
785 3077 aaronmk
        except sql.DatabaseErrors, e:
786 5718 aaronmk
            if not log_exc(e): break
787 3077 aaronmk
788 5889 aaronmk
            handle_unknown_exc(e)
789 3077 aaronmk
        # after exception handled, rerun loop with additional constraints
790
791 5239 aaronmk
    # Resolve default value column
792
    if default != None:
793 5381 aaronmk
        if ignore_all_ref[0]: mapping.update(orig_mapping) # use input cols
794 5239 aaronmk
        try: default = mapping[default]
795
        except KeyError:
796
            db.log_debug('Default value column '
797
                +strings.as_tt(strings.repr_no_u(default))
798
                +' does not exist in mapping, falling back to None', level=2.1)
799
            default = None
800 5380 aaronmk
        else: default = sql_gen.remove_col_rename(default)
801 5239 aaronmk
802
    if missing_msg != None and default == None:
803
        warnings.warn(UserWarning(missing_msg))
804
        # not an error because sometimes the mappings include
805
        # extra tables which aren't used by the dataset
806
807
    # Handle unrecoverable errors
808 5377 aaronmk
    if ignore_all_ref[0]:
809 5373 aaronmk
        log_debug('Returning default: '+strings.as_tt(strings.urepr(default)))
810
        return default
811 5239 aaronmk
812 3077 aaronmk
    if cur != None and row_ct_ref != None and cur.rowcount >= 0:
813
        row_ct_ref[0] += cur.rowcount
814
815 12868 aaronmk
    if is_literals: return sql.value_or_none(cur) # support multi-row functions
816 3530 aaronmk
817
    if is_function: pass # pkeys table already created
818 3077 aaronmk
    elif has_joins:
819 10845 aaronmk
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols,
820
            custom_cond=join_custom_cond)]
821 3077 aaronmk
        log_debug('Getting output table pkeys of existing/inserted rows')
822 5444 aaronmk
        insert_into_pkeys(sql.mk_select(db, select_joins, [in_pkey_col,
823
            sql_gen.NamedCol(into_out_pkey, out_pkey_col)], order_by=None))
824 3077 aaronmk
    else:
825
        sql.add_row_num(db, insert_out_pkeys) # for joining with input pkeys
826
827
        log_debug('Getting input table pkeys of inserted rows')
828 3285 aaronmk
        # Note that mk_main_select() does not use ORDER BY. Instead, assume that
829
        # since the SELECT query is identical to the one used in INSERT SELECT,
830
        # its rows will be retrieved in the same order.
831 3077 aaronmk
        sql.run_query_into(db, mk_main_select(input_joins, [in_pkey]),
832
            into=insert_in_pkeys)
833
        sql.add_row_num(db, insert_in_pkeys) # for joining with output pkeys
834
835
        assert sql.table_row_count(db, insert_out_pkeys) == sql.table_row_count(
836
            db, insert_in_pkeys)
837
838
        log_debug('Combining output and input pkeys in inserted order')
839
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
840
            {sql.row_num_col: sql_gen.join_same_not_null})]
841 4484 aaronmk
        in_col = sql_gen.Col(in_pkey, insert_in_pkeys)
842
        out_col = sql_gen.NamedCol(into_out_pkey,
843
            sql_gen.Col(out_pkey, insert_out_pkeys))
844 5444 aaronmk
        insert_into_pkeys(sql.mk_select(db, pkey_joins, [in_col, out_col],
845
            order_by=None))
846 3077 aaronmk
847
        sql.empty_temp(db, [insert_out_pkeys, insert_in_pkeys])
848
849 5374 aaronmk
    if not is_function: # is_function doesn't leave holes
850 3187 aaronmk
        log_debug('Setting pkeys of missing rows to '
851 4492 aaronmk
            +strings.as_tt(strings.urepr(default)))
852 5993 aaronmk
853
        full_in_pkey_col = sql_gen.Col(in_pkey, full_in_table)
854 5380 aaronmk
        if sql_gen.is_table_col(default):
855
            default = sql_gen.with_table(default, full_in_table)
856 3287 aaronmk
        missing_rows_joins = [full_in_table, sql_gen.Join(into,
857 3187 aaronmk
            {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
858
            # must use join_same_not_null or query will take forever
859 5993 aaronmk
860
        insert_args = dict(order_by=None)
861
        if not sql.table_has_pkey(db, full_in_table): # in_table has duplicates
862
            insert_args.update(dict(distinct_on=[full_in_pkey_col]))
863
864 5444 aaronmk
        insert_into_pkeys(sql.mk_select(db, missing_rows_joins,
865 5993 aaronmk
            [full_in_pkey_col, sql_gen.NamedCol(into_out_pkey, default)],
866
            **insert_args))
867 3187 aaronmk
    # otherwise, there is already an entry for every row
868 3077 aaronmk
869 3530 aaronmk
    sql.empty_temp(db, insert_in_tables+[full_in_table])
870
871
    srcs = []
872 3619 aaronmk
    if is_function: srcs = sql_gen.cols_srcs(in_cols)
873 4484 aaronmk
    return sql_gen.Col(into_out_pkey, into, srcs)